Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 0.0e+00 2151.7 1073 100.0
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 0.0e+00 1848.9 1163 81.6
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1563.9 1143 72.7
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 0.0e+00 1538.5 1146 71.9
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 0.0e+00 1492.6 1142 68.7
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 0.0e+00 1356.7 1135 63.9
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 0.0e+00 1302.3 1155 62.0
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 0.0e+00 1274.2 1149 61.1
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 0.0e+00 1264.2 1098 63.5
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 0.0e+00 1255.4 1133 59.0
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 0.0e+00 1254.6 1132 58.6
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 0.0e+00 1252.3 1148 58.1
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 0.0e+00 1245.0 1125 59.0
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 0.0e+00 1239.2 1133 57.9
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 0.0e+00 1235.7 1139 59.4
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 0.0e+00 1233.8 1132 58.0
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1233.0 1129 59.7
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 0.0e+00 1231.1 1138 58.4
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 0.0e+00 1227.2 1133 57.8
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 0.0e+00 1226.8 1134 58.8
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 0.0e+00 1224.5 1139 59.1
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 0.0e+00 1218.0 1146 57.7
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1218.0 1129 59.3
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1216.4 1131 58.7
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 0.0e+00 1215.7 1103 59.2
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 0.0e+00 1214.9 1126 58.7
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1213.7 1150 58.4
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 0.0e+00 1211.4 1129 58.9
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1211.1 1129 58.8
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1210.3 1149 57.8
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1209.9 1129 58.9
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 0.0e+00 1209.5 1143 57.9
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1208.4 1129 58.8
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1208.4 1129 58.8
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1207.6 1151 57.3
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 0.0e+00 1206.0 1136 56.9
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 0.0e+00 1204.1 1136 56.7
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 0.0e+00 1203.7 1136 56.9
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 0.0e+00 1201.0 1131 57.2
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 0.0e+00 1197.2 1132 57.3
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1197.2 1149 57.7
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1190.6 1136 57.1
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 0.0e+00 1189.5 1127 57.3
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1182.2 1128 57.0
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1173.7 1128 56.4
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 0.0e+00 1171.0 1143 56.3
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 0.0e+00 1162.1 1139 57.2
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1161.0 1140 55.6
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 0.0e+00 1157.1 1127 55.8
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 0.0e+00 1156.7 1101 56.9
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 0.0e+00 1151.0 1131 55.9
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 0.0e+00 1148.7 1135 56.3
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 0.0e+00 1148.3 1136 56.2
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1144.0 1129 56.1
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 0.0e+00 1140.6 1151 55.3
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 0.0e+00 1139.0 1137 55.1
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 0.0e+00 1134.4 1147 53.9
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 0.0e+00 1133.6 1089 56.5
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 0.0e+00 1130.9 1136 54.1
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 0.0e+00 1130.9 1134 56.1
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 0.0e+00 1129.4 1138 54.8
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 0.0e+00 1128.6 1137 54.9
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 0.0e+00 1127.9 1130 55.1
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1115.9 1130 55.3
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 0.0e+00 1112.1 1154 55.0
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 0.0e+00 1105.1 1131 54.3
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 0.0e+00 1087.8 1143 53.7
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1084.7 1149 53.4
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 0.0e+00 1083.9 1129 54.4
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 0.0e+00 1080.1 1153 52.7
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 4.3e-310 1068.1 1151 52.6
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 5.6e-310 1067.8 1022 56.8
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 3.2e-305 1052.0 996 56.2
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 1.2e-301 1040.0 1138 51.2
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 3.6e-301 1038.5 1143 51.2
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 7.5e-299 1030.8 1137 50.7
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 6.4e-298 1027.7 1136 51.0
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 6.4e-298 1027.7 1139 51.1
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 3.2e-297 1025.4 1137 50.7
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 1.1e-294 1016.9 1121 51.0
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 2.3e-292 1009.2 1104 51.6
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 6.8e-292 1007.7 1140 49.6
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 2.4e-289 999.2 1124 50.5
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 3.0e-287 992.3 1126 50.0
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 3.9e-287 991.9 1179 48.8
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 3.9e-287 991.9 1126 50.0
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 5.1e-287 991.5 1127 50.5
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 4.4e-283 978.4 1128 48.5
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 1.9e-265 919.8 1156 46.8
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 4.6e-256 888.6 645 71.2
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 6.9e-252 874.8 1108 46.9
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 1.9e-249 866.7 638 67.7
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 1.0e-247 860.9 704 61.2
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 7.2e-241 838.2 653 65.4
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 1.9e-238 830.1 1143 43.8
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 7.7e-235 818.1 909 50.7
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 3.9e-223 779.2 647 62.1
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 2.3e-215 753.4 558 69.0
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 2.0e-214 750.4 643 59.9
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 3.7e-213 746.1 1129 42.1
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 2.8e-200 703.4 1220 36.9
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.7e-189 667.5 1159 38.3
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 5.6e-185 652.5 559 61.7
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 2.9e-181 640.2 1240 35.6
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 4.9e-181 639.4 644 52.8
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 6.2e-168 595.9 608 55.8
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 1.4e-156 558.1 463 64.1
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 8.4e-149 532.3 704 45.7
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 5.3e-135 486.5 522 54.0
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 4.3e-121 440.3 491 52.5
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 2.7e-115 421.0 487 50.3
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 4.3e-76 290.8 556 35.1
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 7.5e-73 280.0 425 38.8
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 2.7e-70 271.6 288 51.7
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 3.5e-70 271.2 545 33.6
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 3.4e-65 254.6 1603 23.7
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 9.8e-65 253.1 376 44.1
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 1.7e-64 252.3 733 33.3
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 2.3e-61 241.9 516 34.9
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 2.3e-61 241.9 560 31.4
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-55 221.9 463 33.3
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-52 211.8 669 28.1
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-52 211.8 669 28.1
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 5.3e-42 177.6 266 41.0
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 3.4e-41 174.9 369 33.6
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 4.4e-41 174.5 201 44.8
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-40 172.9 180 49.4
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 9.3e-39 166.8 206 47.6
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-31 143.3 211 42.2
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 1.0e-29 136.7 196 42.9
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 8.7e-29 133.7 139 49.6
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 2.8e-27 128.6 103 53.4
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 1.0e-21 110.2 240 31.2
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 2.1e-19 102.4 79 58.2
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 1.7e-16 92.8 53 81.1
EL10Ac2g03601 Beta vulgaris HOM05D004911 ORTHO05D005930 1.1e-15 90.1 58 69.0
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 3.5e-14 85.1 148 39.2
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-13 82.8 52 69.2
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-10 73.2 150 36.0
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-10 72.4 69 43.5
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-10 72.4 69 43.5
Haze_13501 Corylus avellana HOM05D004911 ORTHO05D005930 9.0e-10 70.5 66 57.6
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.2e-09 70.1 118 37.3
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 6.5e-08 64.3 80 41.2
SHI53022 Sapria himalayana HOM05D004911 ORTHO05D005930 2.7e-06 58.9 74 41.9
SHI38853 Sapria himalayana HOM05D004911 ORTHO05D005930 3.6e-06 58.5 267 25.5


User provided reference genes

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