Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.7e-263 912.1 456 100.0
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 7.6e-83 312.0 284 60.2
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 4.5e-67 259.6 280 52.5
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 2.7e-64 250.4 266 53.8
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 3.1e-60 236.9 267 47.6
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 3.0e-55 220.3 266 45.1
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 1.4e-49 201.4 282 43.6
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 9.4e-49 198.7 281 40.9
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 1.2e-48 198.4 272 41.9
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.6e-48 198.0 265 43.0
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 4.6e-48 196.4 266 46.6
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 4.6e-48 196.4 264 43.2
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 7.9e-48 195.7 266 44.0
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 1.8e-47 194.5 268 44.0
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.8e-47 194.5 281 41.6
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 3.9e-47 193.4 276 40.6
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.9e-47 193.4 276 40.2
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.9e-47 193.4 261 41.0
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.8e-47 192.2 277 40.4
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 1.1e-46 191.8 266 43.6
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 4.3e-46 189.9 266 43.2
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 9.7e-46 188.7 274 42.0
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.7e-45 188.0 266 42.9
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 3.7e-45 186.8 280 41.1
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 8.2e-45 185.7 268 42.9
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 1.1e-44 185.3 291 39.5
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 1.8e-44 184.5 266 39.8
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 2.4e-44 184.1 274 43.4
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 4.1e-44 183.3 267 42.3
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 2.9e-42 177.2 260 39.6
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 2.9e-42 177.2 264 42.0
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 3.8e-42 176.8 274 39.8
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 8.5e-42 175.6 264 38.6
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 1.1e-41 175.3 265 39.6
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 1.4e-41 174.9 268 40.7
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 2.5e-41 174.1 266 38.0
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 2.5e-41 174.1 274 39.8
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.2e-41 173.7 261 40.2
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 4.2e-41 173.3 269 40.5
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 5.5e-41 172.9 276 39.5
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 9.4e-41 172.2 285 38.2
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 9.4e-41 172.2 271 40.6
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 1.2e-40 171.8 265 38.9
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 1.6e-40 171.4 269 38.3
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 2.1e-40 171.0 279 39.4
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 4.7e-40 169.9 272 39.7
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 7.9e-40 169.1 153 54.2
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 7.9e-40 169.1 269 39.0
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.0e-39 168.7 265 38.1
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 1.8e-39 167.9 266 39.5
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.8e-39 167.9 145 59.3
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 2.3e-39 167.5 158 53.2
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 2.3e-39 167.5 265 38.5
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 3.9e-39 166.8 145 59.3
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 3.9e-39 166.8 269 38.7
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.1e-38 165.2 272 40.1
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 1.1e-38 165.2 263 38.8
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 3.3e-38 163.7 266 39.5
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 3.3e-38 163.7 145 60.0
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 4.4e-38 163.3 258 38.8
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 3.7e-37 160.2 273 37.0
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 6.3e-37 159.5 269 36.1
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 6.3e-37 159.5 272 37.5
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 8.2e-37 159.1 292 36.0
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.4e-36 158.3 266 37.2
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 2.4e-36 157.5 275 36.4
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 4.1e-36 156.8 203 44.8
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 5.3e-36 156.4 142 57.0
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 5.3e-36 156.4 183 44.3
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 7.0e-36 156.0 144 52.1
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.5e-35 154.8 267 37.1
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 2.0e-35 154.5 267 37.1
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 5.9e-35 152.9 267 37.1
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.0e-34 152.1 183 45.4
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 1.3e-34 151.8 270 37.0
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.3e-34 151.8 164 48.2
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 2.9e-34 150.6 322 33.5
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 3.8e-34 150.2 266 36.1
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 3.8e-34 150.2 259 35.1
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 8.5e-34 149.1 158 48.1
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 2.5e-33 147.5 260 35.0
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 7.2e-33 146.0 269 34.2
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 1.6e-32 144.8 181 47.5
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 8.0e-32 142.5 238 36.6
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 3.3e-30 137.1 264 33.0
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 3.3e-30 137.1 164 45.1
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 1.7e-29 134.8 162 46.3
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 1.8e-28 131.3 190 39.5
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 3.5e-27 127.1 156 43.6
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 3.5e-27 127.1 262 33.6
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 4.5e-27 126.7 264 31.4
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 1.5e-25 121.7 368 29.6
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 6.1e-24 116.3 367 28.1
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 8.3e-21 105.9 200 36.0
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 2.4e-20 104.4 90 60.0
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.0e-18 99.0 220 33.2
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.5e-17 95.1 208 33.2
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 1.0e-15 89.0 147 33.3
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 3.1e-12 77.4 223 32.7
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 9.1e-12 75.9 79 45.6
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 3.8e-10 70.5 177 28.2
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.2e-08 65.5 63 49.2
vmacro03968 Vaccinium macrocarpon HOM05D000513 ORTHO05D003825 1.8e-07 61.6 37 81.1
vmacro08551 Vaccinium macrocarpon HOM05D000932 ORTHO05D000729 8.9e-07 59.3 33 84.8
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 1.2e-06 58.9 48 58.3
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 4.4e-06 57.0 33 81.8
vmacro16026 Vaccinium macrocarpon HOM05D017964 ORTHO05D023176 4.4e-06 57.0 30 86.7
vmacro06010 Vaccinium macrocarpon HOM05D000809 ORTHO05D001196 5.7e-06 56.6 30 86.7
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 7.5e-06 56.2 39 61.5
vmacro05063 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 7.5e-06 56.2 38 68.4
vmacro13309 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 7.5e-06 56.2 53 50.9
vmacro02294 Vaccinium macrocarpon HOM05D001373 ORTHO05D001330 9.8e-06 55.8 105 35.2
vmacro06073 Vaccinium macrocarpon HOM05D000331 ORTHO05D021523 9.8e-06 55.8 50 66.0
vmacro13488 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 9.8e-06 55.8 34 79.4
vmacro19454 Vaccinium macrocarpon HOM05D004852 ORTHO05D006128 9.8e-06 55.8 31 83.9


User provided reference genes

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