Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.6e-228 795.8 410 100.0
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 3.7e-161 572.0 423 74.0
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 5.1e-147 525.0 408 68.1
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.3e-145 520.4 401 67.6
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.5e-133 479.6 409 61.6
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 1.8e-123 446.8 414 57.7
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 5.2e-123 445.3 411 58.6
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 2.2e-121 439.9 369 62.9
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.1e-120 437.6 397 59.2
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 1.4e-120 437.2 370 59.2
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 1.8e-120 436.8 391 58.8
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 1.8e-120 436.8 399 56.9
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.2e-119 434.1 399 56.6
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 2.0e-119 433.3 395 57.2
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 7.7e-119 431.4 390 57.7
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 2.2e-118 429.9 398 56.3
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.9e-118 429.5 399 55.9
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 5.0e-118 428.7 361 60.7
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.1e-117 427.6 388 57.2
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 2.5e-117 426.4 410 55.4
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 5.5e-117 425.2 341 64.2
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 5.5e-117 425.2 379 58.3
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 7.2e-117 424.9 377 58.4
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 1.6e-116 423.7 409 54.3
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 2.1e-116 423.3 406 56.9
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 2.3e-115 419.9 399 55.6
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 6.8e-115 418.3 396 56.8
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 6.8e-115 418.3 410 54.1
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 8.8e-115 417.9 397 55.7
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 2.0e-114 416.8 361 57.3
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 2.2e-113 413.3 405 55.3
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 3.7e-113 412.5 390 55.1
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 7.0e-112 408.3 380 56.6
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 9.1e-112 407.9 416 52.2
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 2.0e-111 406.8 364 55.2
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 2.7e-111 406.4 391 53.5
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 7.7e-111 404.8 399 54.4
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 7.7e-111 404.8 411 54.3
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 1.0e-110 404.4 408 51.2
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 1.0e-110 404.4 405 54.3
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.0e-110 404.4 405 54.1
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.3e-110 404.1 408 51.2
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 2.2e-110 403.3 400 54.5
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 2.9e-110 402.9 408 50.7
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 6.5e-110 401.7 364 55.2
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 8.5e-110 401.4 410 52.7
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 1.9e-109 400.2 395 53.7
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.9e-109 400.2 364 55.8
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 7.2e-109 398.3 387 51.9
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 2.1e-108 396.7 412 52.9
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 2.7e-108 396.4 388 51.5
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 3.6e-108 396.0 391 53.2
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 3.6e-108 396.0 372 54.8
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 4.7e-108 395.6 387 51.7
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 4.7e-108 395.6 385 52.5
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 8.0e-108 394.8 386 52.6
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 8.0e-108 394.8 377 55.2
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.0e-107 394.4 401 52.9
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 2.3e-107 393.3 403 52.6
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 2.3e-107 393.3 403 53.6
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 4.0e-107 392.5 362 55.0
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 5.2e-107 392.1 401 52.6
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 5.2e-107 392.1 385 52.7
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 6.8e-107 391.7 383 54.8
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 3.4e-106 389.4 402 53.5
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 4.4e-106 389.0 386 50.8
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 9.8e-106 387.9 374 53.2
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 2.2e-105 386.7 365 54.5
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 1.8e-104 383.6 402 54.2
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 3.1e-104 382.9 374 53.2
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 4.1e-104 382.5 353 55.2
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 7.0e-104 381.7 324 60.8
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 9.1e-104 381.3 361 54.6
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 4.5e-103 379.0 350 56.9
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.0e-102 377.9 324 60.5
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 2.3e-102 376.7 417 51.1
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 3.8e-102 375.9 387 52.7
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 1.5e-101 374.0 365 53.7
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 5.5e-101 372.1 429 50.1
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 7.2e-101 371.7 350 56.0
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 1.6e-100 370.5 361 54.3
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 8.0e-100 368.2 348 54.0
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 5.2e-99 365.5 423 48.9
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.9e-99 364.8 325 59.1
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 2.9e-97 359.8 410 47.8
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 3.5e-95 352.8 370 51.9
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 2.4e-88 330.1 409 46.9
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 5.0e-86 322.4 356 51.1
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 2.1e-84 317.0 334 50.0
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 7.5e-82 308.5 411 45.0
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 2.4e-80 303.5 236 64.0
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 2.9e-73 280.0 402 42.5
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 6.4e-73 278.9 270 53.0
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 8.1e-68 261.9 292 48.6
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 1.8e-67 260.8 241 54.4
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 1.3e-60 238.0 207 55.1
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 4.2e-56 223.0 203 54.2
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 1.9e-53 214.2 358 38.5
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.3e-52 211.5 233 46.8
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.4e-51 208.0 377 36.9
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 4.5e-50 203.0 347 37.5
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 9.3e-48 195.3 203 49.8
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 1.8e-43 181.0 326 35.9
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 4.2e-40 169.9 344 30.8
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 3.0e-30 137.1 335 30.7
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 1.0e-22 112.1 385 29.9
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.4e-22 111.7 205 29.8
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 2.9e-17 94.0 132 47.7
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.8e-14 84.7 65 61.5
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 8.8e-14 82.4 93 48.4
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 4.4e-13 80.1 77 53.2
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 4.1e-11 73.6 67 53.7


User provided reference genes

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