Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 3.8e-213 744.6 380 100.0
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 4.1e-74 282.7 289 56.1
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 9.2e-66 255.0 294 50.3
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 2.9e-64 250.0 196 68.9
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 2.8e-62 243.4 247 59.5
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 2.6e-60 236.9 299 46.8
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 4.6e-57 226.1 285 46.0
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 4.0e-53 213.0 301 42.9
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 1.3e-51 208.0 280 43.9
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 3.5e-49 199.9 289 42.6
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 3.9e-48 196.4 289 42.2
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 2.5e-47 193.7 324 38.6
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 1.8e-45 187.6 291 40.9
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 4.0e-45 186.4 283 41.3
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 4.0e-45 186.4 287 41.1
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 5.2e-45 186.0 285 40.7
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 2.6e-44 183.7 259 44.0
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 3.4e-44 183.3 303 39.6
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 4.4e-44 183.0 285 40.7
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 9.9e-44 181.8 288 39.2
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 6.4e-43 179.1 291 36.8
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 1.4e-42 177.9 300 37.7
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 1.4e-42 177.9 285 38.9
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 2.4e-42 177.2 285 38.2
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 2.1e-41 174.1 283 39.9
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 3.0e-40 170.2 280 38.2
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 3.0e-40 170.2 300 36.7
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 3.3e-39 166.8 213 46.5
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 3.3e-39 166.8 280 37.5
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 5.6e-39 166.0 288 37.8
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 7.3e-39 165.6 280 37.5
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 1.2e-38 164.9 285 36.8
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 1.2e-38 164.9 285 36.8
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 1.1e-37 161.8 280 37.1
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 8.9e-37 158.7 288 36.8
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 1.2e-36 158.3 288 36.1
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 1.2e-36 158.3 280 36.4
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 1.2e-36 158.3 306 34.0
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 2.0e-36 157.5 291 34.0
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 2.0e-36 157.5 292 36.3
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 2.6e-36 157.1 287 34.1
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 9.9e-36 155.2 292 35.3
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 9.9e-36 155.2 302 34.4
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 2.2e-35 154.1 287 36.9
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 3.8e-35 153.3 200 44.5
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 3.8e-35 153.3 292 36.3
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 4.2e-34 149.8 224 39.7
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.6e-33 147.9 285 35.8
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 1.6e-33 147.9 252 38.5
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 2.1e-33 147.5 286 34.3
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 4.6e-33 146.4 279 34.4
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 4.6e-33 146.4 279 34.4
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 1.0e-32 145.2 288 33.7
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 1.0e-32 145.2 199 41.7
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 1.0e-32 145.2 199 41.7
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 1.3e-32 144.8 306 33.3
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 2.3e-32 144.1 226 40.3
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 3.9e-32 143.3 283 36.0
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 5.1e-32 142.9 292 33.9
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 4.3e-31 139.8 303 34.7
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 4.3e-31 139.8 216 41.7
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 9.6e-31 138.7 289 36.0
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 9.6e-31 138.7 287 34.1
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 1.3e-30 138.3 205 40.5
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 1.3e-30 138.3 300 33.7
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 1.3e-30 138.3 231 37.7
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 1.6e-30 137.9 294 33.3
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 1.6e-30 137.9 287 32.4
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 8.1e-30 135.6 286 33.2
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 8.1e-30 135.6 286 33.6
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 1.1e-29 135.2 286 33.2
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 4.0e-29 133.3 200 41.5
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 6.9e-29 132.5 287 32.4
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 9.0e-29 132.1 207 40.6
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 1.2e-28 131.7 236 35.2
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 5.8e-28 129.4 285 32.3
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 7.1e-26 122.5 282 29.4
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 7.8e-25 119.0 300 31.3
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 1.3e-24 118.2 280 30.4
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 3.0e-24 117.1 288 29.9
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 1.5e-23 114.8 300 30.7
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.5e-23 114.0 150 45.3
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 5.6e-23 112.8 303 31.0
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 7.3e-23 112.5 280 29.3
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 3.6e-22 110.2 278 30.6
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 1.1e-21 108.6 278 30.2
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 1.4e-21 108.2 261 31.0
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 4.0e-21 106.7 149 45.6
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 2.0e-20 104.4 278 29.5
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 1.7e-19 101.3 342 27.2
ATR0730G049 Amborella trichopoda HOM05D007447 ORTHO05D009372 3.8e-19 100.1 203 33.5
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 4.9e-19 99.8 135 40.0
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 9.6e-15 85.5 125 40.8
Os02g0305600 Oryza sativa ssp. japonica HOM05D007447 ORTHO05D009372 1.6e-14 84.7 282 25.9
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 5.3e-13 79.7 149 32.9
Gohir.A02G158500 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.0e-08 65.5 73 47.9
Zm00001eb203200 Zea mays HOM05D007447 ORTHO05D009372 2.3e-08 64.3 292 25.0
Gohir.A01G124600 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.0e-08 63.9 69 49.3
Gohir.A01G131222 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.0e-08 63.9 69 49.3
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 6.7e-08 62.8 169 31.4


User provided reference genes

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