Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15920 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 6.2e-307 1056.6 517 100.0
Rhsim02G0132600 Rhododendron simsii HOM05D005633 ORTHO05D007003 1.3e-264 916.0 535 83.9
Hma1.2p1_0208F.1_g088350 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.2e-188 663.7 528 65.9
Actinidia26133 Actinidia chinensis HOM05D005633 ORTHO05D007003 1.4e-186 656.8 453 74.6
Lj2C290G9 Lonicera japonica HOM05D005633 ORTHO05D007003 3.0e-184 649.0 532 62.6
QL05p041669 Quercus lobata HOM05D005633 ORTHO05D007003 1.1e-183 647.1 531 62.9
GSVIVG01021090001 Vitis vinifera HOM05D005633 ORTHO05D007003 1.8e-181 639.8 529 63.9
Cc02_g13630 Coffea canephora HOM05D005633 ORTHO05D007003 4.0e-181 638.6 544 59.6
DCAR_004057 Daucus carota HOM05D005633 ORTHO05D007003 2.9e-179 632.5 548 58.8
TAR629G0889 Trochodendron aralioides HOM05D005633 ORTHO05D007003 2.9e-179 632.5 520 62.5
Manes.17G047800 Manihot esculenta HOM05D005633 ORTHO05D007003 4.9e-179 631.7 550 60.2
Actinidia07591 Actinidia chinensis HOM05D005633 ORTHO05D007003 1.1e-178 630.6 446 71.5
Sabra11G0038100 Salix brachista HOM05D005633 ORTHO05D007003 5.4e-178 628.2 530 62.1
Sabra04G0029300 Salix brachista HOM05D005633 ORTHO05D007003 2.3e-176 622.9 539 60.5
Potri.004G046900 Populus trichocarpa HOM05D005633 ORTHO05D007003 3.0e-176 622.5 551 60.3
Potri.011G056100 Populus trichocarpa HOM05D005633 ORTHO05D007003 5.1e-176 621.7 530 61.3
CiPaw.09G062100 Carya illinoinensis HOM05D005633 ORTHO05D007003 7.3e-175 617.8 553 59.1
Cfa000508 Carpinus fangiana HOM05D005633 ORTHO05D007003 1.2e-174 617.1 537 61.1
FvH4_3g08860 Fragaria vesca HOM05D005633 ORTHO05D007003 2.1e-174 616.3 529 60.1
Dinv17333 Davidia involucrata HOM05D005633 ORTHO05D007003 3.6e-174 615.5 524 62.0
FAN11G1234 Fragaria x ananassa HOM05D005633 ORTHO05D007003 4.7e-174 615.1 529 59.9
Atru.chr10.1839_Atru.chr10.1840 Acer truncatum HOM05D005633 ORTHO05D007003 1.1e-173 614.0 531 60.1
Nn1g04161 Nelumbo nucifera HOM05D005633 ORTHO05D007003 1.8e-173 613.2 524 60.7
MD10G1291600 Malus domestica HOM05D005633 ORTHO05D007003 2.4e-173 612.8 541 58.8
Oeu029366.1 Olea europaea HOM05D005633 ORTHO05D007003 2.0e-172 609.8 535 61.5
Migut.M01122 Erythranthe guttata HOM05D005633 ORTHO05D007003 1.1e-170 604.0 530 59.6
FAN21G3099 Fragaria x ananassa HOM05D005633 ORTHO05D007003 1.1e-170 604.0 529 59.4
Gohir.A06G129500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 1.1e-170 604.0 526 59.3
FAN25G1993 Fragaria x ananassa HOM05D005633 ORTHO05D007003 4.2e-170 602.1 529 59.0
CANSAT35G1988 Cannabis sativa HOM05D005633 ORTHO05D007003 7.1e-170 601.3 532 60.0
Gorai.010G155400 Gossypium raimondii HOM05D005633 ORTHO05D007003 1.2e-169 600.5 526 58.9
Sopen02g022750 Solanum pennellii HOM05D005633 ORTHO05D007003 1.2e-169 600.5 532 58.5
Gohir.D06G133500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 1.6e-169 600.1 511 59.7
Thecc.06G183700 Theobroma cacao HOM05D005633 ORTHO05D007003 3.5e-169 599.0 538 59.9
Solyc02g077900.4 Solanum lycopersicum HOM05D005633 ORTHO05D007003 7.8e-169 597.8 532 58.5
Nitab4.5_0016285g0010 Nicotiana tabacum HOM05D005633 ORTHO05D007003 3.9e-168 595.5 532 58.1
TWI63G0225 Tripterygium wilfordii HOM05D005633 ORTHO05D007003 1.9e-167 593.2 553 57.7
CAN.G529.25 Capsicum annuum HOM05D005633 ORTHO05D007003 4.3e-167 592.0 530 57.5
Duzib235G0140 Durio zibethinus HOM05D005633 ORTHO05D007003 6.2e-166 588.2 532 58.1
PGSC0003DMG400029731 Solanum tuberosum HOM05D005633 ORTHO05D007003 1.5e-164 583.6 545 57.2
Atru.chr10.1822_Atru.chr10.1823 Acer truncatum HOM05D005633 ORTHO05D007003 3.4e-164 582.4 506 59.5
COL.COLO4_31438 Corchorus olitorius HOM05D005633 ORTHO05D007003 2.4e-162 576.2 561 56.0
Sc05g0007520 Simmondsia chinensis HOM05D005633 ORTHO05D007003 4.6e-161 572.0 523 58.1
ECA248G0126 Erigeron canadensis HOM05D005633 ORTHO05D007003 1.5e-159 567.0 526 57.4
SalBow8G0351 Salvia bowleyana HOM05D005633 ORTHO05D007003 5.6e-159 565.1 578 53.5
MELO3C007272.2 Cucumis melo HOM05D005633 ORTHO05D007003 5.8e-156 555.1 525 55.2
Cpa.g.sc373.8 Carica papaya HOM05D005633 ORTHO05D007003 6.4e-155 551.6 479 58.0
FAN16G2481 Fragaria x ananassa HOM05D005633 ORTHO05D007003 1.2e-153 547.4 529 55.0
HanXRQChr01g0004651 Helianthus annuus HOM05D005633 ORTHO05D007003 1.2e-153 547.4 498 58.4
Peaxi162Scf01100g00118 Petunia axillaris HOM05D005633 ORTHO05D007003 1.2e-153 547.4 536 54.9
Sed0020009 Sechium edule HOM05D005633 ORTHO05D007003 3.5e-153 545.8 526 54.2
Glyma.13G237200 Glycine max HOM05D005633 ORTHO05D007003 6.0e-153 545.0 540 54.8
TPR.G16498 Trifolium pratense HOM05D005633 ORTHO05D007003 7.9e-153 544.7 540 54.6
Medtr2g014210 Medicago truncatula HOM05D005633 ORTHO05D007003 1.8e-152 543.5 541 54.5
CsaV3_6G050250 Cucumis sativus L. HOM05D005633 ORTHO05D007003 8.7e-152 541.2 526 54.2
arahy.Tifrunner.gnm1.ann1.U0Q0B6 Arachis hypogaea HOM05D005633 ORTHO05D007003 3.3e-151 539.3 531 55.2
Phvul.006G183800 Phaseolus vulgaris HOM05D005633 ORTHO05D007003 5.6e-151 538.5 551 55.2
arahy.Tifrunner.gnm1.ann1.QNV263 Arachis hypogaea HOM05D005633 ORTHO05D007003 9.6e-151 537.7 529 55.6
Hund21211 Selenicereus undatus HOM05D005633 ORTHO05D007003 2.1e-150 536.6 576 50.0
PSO675G0497 Papaver somniferum HOM05D005633 ORTHO05D007003 1.1e-149 534.3 547 55.8
Lalb_Chr18g0059461 Lupinus albus HOM05D005633 ORTHO05D007003 2.4e-149 533.1 532 54.3
Hma1.2p1_0208F.1_g088340 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 3.1e-149 532.7 445 63.1
Nitab4.5_0002219g0050 Nicotiana tabacum HOM05D005633 ORTHO05D007003 5.3e-149 531.9 480 57.9
ClCG01G023110 Citrullus lanatus HOM05D005633 ORTHO05D007003 1.2e-148 530.8 525 54.3
EL10Ac8g20419 Beta vulgaris HOM05D005633 ORTHO05D007003 2.6e-148 529.6 527 53.3
Psat1g203720 Pisum sativum HOM05D005633 ORTHO05D007003 2.6e-148 529.6 516 54.7
Ca_00349_v3 Cicer arietinum L. HOM05D005633 ORTHO05D007003 6.5e-147 525.0 511 54.4
Aqoxy1G02351 Aquilegia oxysepala HOM05D005633 ORTHO05D007003 1.9e-146 523.5 529 54.3
Lj6g0019345 Lotus japonicus HOM05D005633 ORTHO05D007003 1.2e-145 520.8 539 51.8
ATR0752G234 Amborella trichopoda HOM05D005633 ORTHO05D007003 6.0e-145 518.5 542 52.4
Lsat_1_v5_gn_1_124421 Lactuca sativa HOM05D005633 ORTHO05D007003 6.7e-144 515.0 527 53.5
THA.LOC104820553 Tarenaya hassleriana HOM05D005633 ORTHO05D007003 2.2e-142 510.0 532 52.1
AL1G41900 Arabidopsis lyrata HOM05D005633 ORTHO05D007003 1.0e-139 501.1 546 49.6
Sp1g24540 Schrenkiella parvula HOM05D005633 ORTHO05D007003 5.0e-139 498.8 546 50.0
Ah.14g089640 Amaranthus hybridus HOM05D005633 ORTHO05D007003 8.5e-139 498.0 523 51.6
AT1G28320 Arabidopsis thaliana HOM05D005633 ORTHO05D007003 2.5e-138 496.5 538 49.8
Ciclev10014582m.g Citrus clementina HOM05D005633 ORTHO05D007003 2.5e-138 496.5 432 60.6
A09p37740 Brassica napus HOM05D005633 ORTHO05D007003 7.9e-137 491.5 539 51.0
Thhalv10006942m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 7.9e-137 491.5 547 49.2
CARHR027810 Cardamine hirsuta HOM05D005633 ORTHO05D007003 1.0e-136 491.1 542 50.2
Carub.0001s2677 Capsella rubella HOM05D005633 ORTHO05D007003 1.8e-136 490.3 541 49.0
C05p27200 Brassica napus HOM05D005633 ORTHO05D007003 6.7e-136 488.4 539 50.6
BraA09t39286Z Brassica rapa HOM05D005633 ORTHO05D007003 6.7e-136 488.4 539 50.6
SGA_v2.0_scaffold100G29699 Striga asiatica HOM05D005633 ORTHO05D007003 2.5e-135 486.5 512 52.0
Aa31sc86G40 Aethionema arabicum HOM05D005633 ORTHO05D007003 1.1e-133 481.1 529 50.1
PGR042G0490 Punica granatum HOM05D005633 ORTHO05D007003 3.1e-133 479.6 515 50.7
BolC5t31434H Brassica oleracea HOM05D005633 ORTHO05D007003 1.0e-131 474.6 539 49.2
SEGI_06204 Sequoiadendron giganteum HOM05D005633 ORTHO05D007003 5.0e-131 472.2 549 49.2
VMungo0540G1564 Vigna mungo HOM05D005633 ORTHO05D007003 5.0e-131 472.2 477 55.1
AUR62014850 Chenopodium quinoa HOM05D005633 ORTHO05D007003 3.0e-128 463.0 483 50.7
Os05g0497700 Oryza sativa ssp. japonica HOM05D005633 ORTHO05D007003 4.2e-114 416.0 520 45.0
Zm00001eb291760 Zea mays HOM05D005633 ORTHO05D007003 3.6e-113 412.9 531 43.1
AUR62017045 Chenopodium quinoa HOM05D005633 ORTHO05D007003 4.0e-112 409.5 449 48.1
Haze_06405 Corylus avellana HOM05D005633 ORTHO05D007003 1.5e-111 407.5 366 57.4
RcHm_v2.0_Chr5g0008891 Rosa chinensis HOM05D005633 ORTHO05D007003 1.5e-111 407.5 340 60.6
Prupe.4G050600 Prunus persica HOM05D005633 ORTHO05D007003 7.5e-111 405.2 360 58.1
Pp3c24_9210 Physcomitrium patens HOM05D005633 ORTHO05D007003 8.2e-110 401.7 551 45.4
Mapoly0045s0140 Marchantia polymorpha HOM05D005633 ORTHO05D007003 8.5e-107 391.7 544 43.6
AagrBONN_evm.TU.Sc2ySwM_228.2766 Anthoceros agrestis HOM05D005633 ORTHO05D007003 7.5e-103 378.6 553 43.2
unitig_27.g24969 Utricularia gibba HOM05D005633 ORTHO05D007003 6.3e-102 375.6 506 43.1
Eucgr.E03258 Eucalyptus grandis HOM05D005633 ORTHO05D007003 1.2e-100 371.3 359 54.9
BcaB07g32447 Brassica carinata HOM05D005633 ORTHO05D007003 2.8e-89 333.6 354 52.8
Thhalv10007180m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 6.0e-84 315.8 339 50.1
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 2.3e-83 313.9 402 43.5
Glyma.15G076300 Glycine max HOM05D005633 ORTHO05D007003 2.1e-73 280.8 497 38.6
Actinidia39471 Actinidia chinensis HOM05D005633 ORTHO05D007003 1.1e-64 251.9 381 45.4
CBR_g49783 Chara braunii HOM05D005633 ORTHO05D001702 3.4e-63 246.9 583 33.1
HPP92_025316 Vanilla planifolia HOM05D005633 ORTHO05D007003 1.4e-56 224.9 235 52.8
Haze_06406 Corylus avellana HOM05D005633 ORTHO05D007003 5.3e-56 223.0 195 61.5
HPP92_025315 Vanilla planifolia HOM05D005633 ORTHO05D007003 1.5e-47 194.9 231 45.5
MBI02_g35622_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 3.2e-45 187.2 228 49.6
MBI02_g35619_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.4e-40 171.0 223 46.6
RcHm_v2.0_Chr5g0008901 Rosa chinensis HOM05D005633 ORTHO05D007003 1.9e-37 161.4 113 69.0
MBI02_g35620_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 3.0e-35 154.1 251 39.4
BcaB07g32448 Brassica carinata HOM05D005633 ORTHO05D007003 9.0e-32 142.5 114 57.9
MCO12G111 Micromonas commoda HOM05D005633 ORTHO05D007003 1.9e-29 134.8 524 28.8
MBI02_g19360_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.4e-24 117.9 208 38.5
MapolyY_B0048 Marchantia polymorpha HOM05D005633 ORTHO05D007003 4.5e-23 113.6 125 47.2
MD05G1312100 Malus domestica HOM05D005633 ORTHO05D007003 4.6e-20 103.6 59 78.0
MBI02_g35618_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 6.9e-16 89.7 86 53.5
CDE05G1605 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 3.4e-15 87.4 82 52.4
Cre12.g548200 Chlamydomonas reinhardtii HOM05D005633 ORTHO05D007003 4.5e-15 87.0 113 36.3
MBI02_g19359_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.9e-14 84.3 55 69.1
MBI02_g19356_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 7.0e-08 63.2 63 54.0
BolC3t19753H Brassica oleracea HOM05D005633 ORTHO05D007003 1.2e-07 62.4 43 55.8
MBI02_g32442_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 1.5e-07 62.0 63 54.0
MBI02_g19358_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.2e-06 58.2 62 51.6
Sabra05G0135200 Salix brachista HOM05D005633 ORTHO05D007003 2.2e-06 58.2 39 66.7
A08p25680 Brassica napus HOM05D005633 ORTHO05D007003 6.5e-06 56.6 43 51.2


User provided reference genes

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