Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 1.2e-37 159.5 88 100.0
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 1.8e-28 129.0 83 88.0
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 3.7e-26 121.3 83 84.3
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 9.0e-25 116.7 83 79.5
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 9.0e-25 116.7 83 78.3
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 2.0e-24 115.5 83 78.3
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 5.8e-24 114.0 83 74.7
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 1.7e-23 112.5 85 74.1
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 4.9e-23 110.9 83 74.7
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 6.5e-23 110.5 83 73.5
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 8.4e-23 110.2 83 72.3
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.4e-22 109.4 83 77.1
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.9e-22 109.0 83 72.3
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 9.3e-22 106.7 83 73.5
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 9.3e-22 106.7 83 72.3
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.1e-21 105.5 83 73.5
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 2.7e-21 105.1 74 75.7
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.7e-21 105.1 83 71.1
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 2.7e-21 105.1 83 71.1
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 4.6e-21 104.4 83 73.5
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 4.6e-21 104.4 83 73.5
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.0e-20 103.2 83 73.5
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 1.3e-20 102.8 83 72.3
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.3e-20 102.8 83 69.9
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.3e-20 102.8 80 68.8
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 1.8e-20 102.4 80 66.2
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 3.0e-20 101.7 71 77.5
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 3.0e-20 101.7 87 67.8
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 3.9e-20 101.3 80 70.0
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 6.7e-20 100.5 71 76.1
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 8.7e-20 100.1 81 67.9
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 8.7e-20 100.1 83 65.1
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 1.1e-19 99.8 80 65.0
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.1e-19 99.8 72 76.4
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.1e-19 99.8 78 73.1
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.5e-19 99.4 80 68.8
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.5e-19 99.4 80 68.8
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.5e-19 98.6 80 67.5
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 2.5e-19 98.6 79 67.1
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 3.3e-19 98.2 83 69.9
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 5.7e-19 97.4 77 68.8
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 7.4e-19 97.1 77 68.8
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 7.4e-19 97.1 83 68.7
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 9.7e-19 96.7 85 64.7
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 9.7e-19 96.7 85 64.7
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.3e-18 96.3 73 74.0
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.3e-18 96.3 85 64.7
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 1.6e-18 95.9 73 74.0
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.6e-18 95.9 84 64.3
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.6e-18 95.9 73 74.0
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 2.2e-18 95.5 83 67.5
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.2e-18 95.5 83 63.9
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 4.8e-18 94.4 80 67.5
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 4.8e-18 94.4 80 66.2
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 6.3e-18 94.0 83 66.3
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 6.3e-18 94.0 83 66.3
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 6.3e-18 94.0 74 68.9
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 8.2e-18 93.6 73 72.6
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 8.2e-18 93.6 76 65.8
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 1.1e-17 93.2 73 71.2
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 1.1e-17 93.2 84 67.9
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.1e-17 93.2 77 70.1
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 1.4e-17 92.8 78 66.7
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.4e-17 92.8 83 66.3
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 2.4e-17 92.0 84 66.7
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 2.4e-17 92.0 80 67.5
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 3.1e-17 91.7 77 68.8
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 5.3e-17 90.9 83 60.2
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 6.9e-17 90.5 87 58.6
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.2e-16 89.7 80 63.8
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.2e-16 89.7 80 65.0
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.5e-16 89.4 60 80.0
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.0e-16 89.0 73 67.1
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 3.4e-16 88.2 80 61.2
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 3.4e-16 88.2 72 65.3
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 3.4e-16 88.2 83 62.7
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 4.5e-16 87.8 83 59.0
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 1.0e-15 86.7 83 59.0
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.0e-15 86.7 83 59.0
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 1.0e-15 86.7 83 57.8
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 1.0e-15 86.7 83 57.8
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.0e-15 86.7 83 60.2
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 1.3e-15 86.3 58 79.3
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.7e-15 85.9 83 57.8
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-15 85.9 82 59.8
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 2.2e-15 85.5 83 56.6
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 2.2e-15 85.5 77 62.3
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 6.5e-15 84.0 83 59.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 8.5e-15 83.6 83 54.2
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 2.5e-14 82.0 83 57.8
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 1.2e-13 79.7 92 54.3
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 4.6e-13 77.8 75 57.3
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 7.9e-13 77.0 80 53.8
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 3.0e-12 75.1 71 59.2
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.1e-11 73.2 77 54.5
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.3e-11 71.6 108 45.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.3e-10 69.7 109 44.0
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 6.3e-10 67.4 72 51.4
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.1e-09 64.7 74 51.4
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 3.2e-06 55.1 58 53.4


User provided reference genes

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