Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15748 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.8e-73 278.5 137 100.0
vmacro15745 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.6e-31 139.0 75 90.7
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.3e-17 93.6 73 64.4
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.3e-14 83.6 73 60.3
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.2e-14 82.8 73 60.3
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.5e-13 79.3 74 56.8
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 1.2e-12 77.0 73 54.8
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 4.7e-12 75.1 73 50.7
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 4.7e-12 75.1 73 50.7
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 8.0e-12 74.3 73 53.4
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.4e-11 73.6 73 50.7
Duzib114G0774 Durio zibethinus HOM05D006716 ORTHO05D008396 1.5e-10 70.1 73 49.3
vmacro15749 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.3e-09 67.0 44 72.7
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 4.8e-09 65.1 71 40.8
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.1e-08 63.9 71 45.1
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.4e-08 63.5 72 41.7
Duzib114G0505 Durio zibethinus HOM05D006716 ORTHO05D008396 1.8e-08 63.2 71 45.1
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 1.8e-08 63.2 74 43.2
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 2.4e-08 62.8 73 46.6
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 2.4e-08 62.8 83 43.4
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 3.1e-08 62.4 73 45.2
Nitab4.5_0001187g0060 Nicotiana tabacum HOM05D006716 ORTHO05D008396 4.1e-08 62.0 77 44.2
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 7.0e-08 61.2 70 50.0
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 7.0e-08 61.2 72 41.7
Nitab4.5_0007530g0050 Nicotiana tabacum HOM05D006716 ORTHO05D008396 7.0e-08 61.2 73 45.2
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 9.1e-08 60.8 74 43.2
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 9.1e-08 60.8 72 44.4
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 9.1e-08 60.8 72 44.4
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 1.2e-07 60.5 82 40.2
Rhsim01G0093700 Rhododendron simsii HOM05D000991 ORTHO05D008396 1.2e-07 60.5 70 51.4
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 2.7e-07 59.3 73 43.8
Solyc02g082600.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 2.7e-07 59.3 73 42.5
Potri.018G001301 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.0e-06 57.4 81 38.3
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 1.3e-06 57.0 72 43.1
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 1.7e-06 56.6 67 46.3
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 2.3e-06 56.2 83 41.0
Lj6A58T50 Lonicera japonica HOM05D006716 ORTHO05D008396 2.9e-06 55.8 67 46.3
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 3.8e-06 55.5 65 47.7
Sopen02g027300 Solanum pennellii HOM05D006716 ORTHO05D008396 3.8e-06 55.5 73 42.5
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 6.6e-06 54.7 65 44.6


User provided reference genes

Program Settings