Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 2.8e-196 688.7 436 100.0
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 4.4e-165 585.1 436 85.1
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 4.4e-165 585.1 436 85.1
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 2.3e-161 572.8 451 81.2
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 6.9e-158 561.2 437 78.9
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 2.7e-154 549.3 437 78.3
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 3.6e-151 538.9 437 74.6
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 3.0e-145 519.2 437 71.9
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 2.1e-138 496.5 441 72.1
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 1.3e-135 487.3 442 69.5
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 2.1e-135 486.5 457 68.3
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 1.2e-133 480.7 442 71.7
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 5.8e-133 478.4 442 67.4
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 1.0e-132 477.6 442 71.3
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 1.4e-131 473.8 442 72.2
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 9.3e-131 471.1 443 72.2
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 2.1e-130 469.9 435 68.7
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 2.8e-127 459.5 442 68.8
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 1.2e-125 454.1 447 64.0
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 1.5e-125 453.8 442 69.2
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 3.4e-125 452.6 450 60.7
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 1.4e-123 447.2 442 68.1
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 5.5e-123 445.3 449 62.6
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 2.3e-121 439.9 448 60.9
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 1.5e-120 437.2 446 63.5
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 4.3e-120 435.6 447 63.5
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 7.4e-120 434.9 449 60.1
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 1.7e-119 433.7 442 66.3
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 2.8e-119 433.0 456 64.0
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 1.2e-117 427.6 445 63.6
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 7.7e-117 424.9 449 63.9
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 1.7e-116 423.7 438 62.1
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 6.5e-116 421.8 440 55.0
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 6.5e-116 421.8 457 55.6
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 7.2e-115 418.3 452 55.8
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 1.6e-114 417.2 464 54.7
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 6.7e-113 411.8 445 61.6
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 1.1e-112 411.0 451 62.1
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.5e-112 410.6 452 62.6
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 9.7e-112 407.9 460 54.8
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 9.7e-112 407.9 460 54.8
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 3.7e-111 406.0 449 59.7
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 4.8e-111 405.6 458 58.1
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 4.1e-110 402.5 448 60.5
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 9.1e-110 401.4 448 60.0
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 1.5e-109 400.6 447 60.9
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 5.0e-108 395.6 441 61.2
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.1e-107 394.4 451 56.3
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 5.5e-107 392.1 438 55.0
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 6.1e-106 388.7 451 59.6
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 5.7e-104 382.1 451 60.3
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 7.0e-102 375.2 441 58.0
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 9.1e-102 374.8 441 59.0
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.6e-101 374.0 441 57.8
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.7e-100 370.5 406 58.6
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 2.1e-98 363.6 444 52.5
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 8.0e-98 361.7 449 59.9
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 1.8e-94 350.5 428 57.0
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.4e-94 350.1 459 55.1
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 7.0e-94 348.6 442 59.0
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.0e-92 344.7 428 58.9
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 7.2e-91 338.6 426 51.4
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 2.1e-90 337.0 442 53.6
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 3.0e-89 333.2 427 45.9
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 8.8e-89 331.6 418 55.7
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 1.2e-88 331.3 440 55.2
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 4.4e-88 329.3 442 48.9
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 1.1e-86 324.7 444 59.5
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 6.1e-82 308.9 437 43.5
Glyma.08G110600 Glycine max HOM05D004237 ORTHO05D005002 4.9e-79 299.3 378 55.3
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 4.7e-74 282.7 440 47.7
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.8e-73 280.8 453 41.1
Nitab4.5_0000697g0020 Nicotiana tabacum HOM05D004237 ORTHO05D005002 8.9e-73 278.5 344 65.4
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 4.4e-72 276.2 417 48.9
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 1.2e-69 268.1 438 49.8
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 2.6e-64 250.4 232 56.9
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 1.1e-57 228.4 125 82.4
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 1.1e-57 228.4 125 82.4
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 2.3e-57 227.3 462 51.1
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 2.6e-56 223.8 445 49.0
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 3.9e-44 183.3 459 38.6
unitig_45.g31538 Utricularia gibba HOM05D004237 ORTHO05D005002 9.0e-41 172.2 231 40.3
unitig_578.g16512 Utricularia gibba HOM05D004237 ORTHO05D005002 9.0e-41 172.2 231 40.3
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 3.4e-40 170.2 146 56.2
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 7.6e-40 169.1 162 53.1
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 1.3e-39 168.3 443 37.2
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 1.7e-39 167.9 147 55.1
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 2.2e-39 167.5 168 51.8
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 2.2e-39 167.5 168 51.8
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 2.9e-39 167.2 259 40.9
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 6.4e-39 166.0 167 50.3
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 6.4e-39 166.0 162 52.5
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 1.9e-38 164.5 146 54.8
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.9e-38 164.5 150 52.0
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 1.9e-38 164.5 150 52.0
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 1.9e-38 164.5 120 61.7
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 1.9e-38 164.5 261 43.3
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 2.4e-38 164.1 269 38.3
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 2.4e-38 164.1 120 60.0
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 2.4e-38 164.1 120 59.2
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 3.2e-38 163.7 163 52.1
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 4.2e-38 163.3 148 54.7
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 4.2e-38 163.3 120 60.8
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 4.2e-38 163.3 120 60.8
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 4.2e-38 163.3 170 50.6
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 4.2e-38 163.3 165 51.5
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 7.1e-38 162.5 120 60.8
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 7.1e-38 162.5 259 44.4
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.2e-37 161.8 120 60.0
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 2.1e-37 161.0 148 54.1
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 2.7e-37 160.6 120 60.0
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 2.7e-37 160.6 168 50.6
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 3.5e-37 160.2 120 60.0
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 3.5e-37 160.2 120 60.0
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 3.5e-37 160.2 163 52.1
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 3.5e-37 160.2 155 51.0
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 4.6e-37 159.8 172 50.0
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 4.6e-37 159.8 151 51.7
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 4.6e-37 159.8 158 50.6
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 6.0e-37 159.5 260 42.3
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 6.0e-37 159.5 262 38.2
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 6.0e-37 159.5 120 60.0
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 7.9e-37 159.1 120 62.5
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 7.9e-37 159.1 160 53.1
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 7.9e-37 159.1 144 52.1
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 7.9e-37 159.1 153 50.3
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 7.9e-37 159.1 153 50.3
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 1.0e-36 158.7 120 58.3
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 1.0e-36 158.7 120 59.2
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 1.0e-36 158.7 149 51.7
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 1.0e-36 158.7 121 58.7
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 1.7e-36 157.9 147 57.1
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 1.7e-36 157.9 121 57.9
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 2.3e-36 157.5 141 53.2
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 3.0e-36 157.1 121 57.9
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 3.9e-36 156.8 266 38.7
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 3.9e-36 156.8 166 52.4
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 3.9e-36 156.8 178 47.8
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 3.9e-36 156.8 140 53.6
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 3.9e-36 156.8 266 37.6
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 6.6e-36 156.0 128 57.0
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 6.6e-36 156.0 118 59.3
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 1.5e-35 154.8 118 59.3
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 1.5e-35 154.8 118 59.3
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 4.3e-35 153.3 120 57.5
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 4.3e-35 153.3 120 57.5
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 5.6e-35 152.9 120 59.2
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 5.6e-35 152.9 120 55.8
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 5.6e-35 152.9 120 55.8
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 7.3e-35 152.5 120 55.8
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 2.8e-34 150.6 123 53.7
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 4.8e-34 149.8 182 44.5
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 1.4e-33 148.3 112 59.8
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 1.4e-33 148.3 121 53.7
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 3.4e-32 143.7 126 53.2
SHI01026 Sapria himalayana HOM05D004237 ORTHO05D005002 1.2e-29 135.2 366 46.4
TPR.G11942 Trifolium pratense HOM05D004237 ORTHO05D005002 6.7e-28 129.4 78 76.9
Lj6P390T29 Lonicera japonica HOM05D004237 ORTHO05D005002 1.6e-26 124.8 129 58.9
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 5.3e-09 66.6 53 60.4
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 5.9e-08 63.2 84 48.8
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 1.7e-07 61.6 87 44.8
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 5.0e-07 60.1 50 58.0
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 4.2e-06 57.0 50 54.0
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 5.5e-06 56.6 51 52.9


User provided reference genes

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