Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.4e-232 809.3 420 100.0
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 2.8e-193 678.7 446 83.6
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 2.1e-140 503.1 565 54.5
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 3.2e-136 489.2 547 54.7
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 2.1e-119 433.3 433 57.0
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 2.2e-116 423.3 430 55.8
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 2.2e-113 413.3 435 53.3
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 6.1e-103 378.6 433 50.3
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 5.1e-102 375.6 438 48.9
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 4.8e-100 369.0 439 51.3
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 3.1e-99 366.3 433 49.4
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 6.9e-99 365.2 463 46.9
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 1.2e-98 364.4 455 47.3
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 3.4e-98 362.8 438 48.4
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 1.0e-97 361.3 432 47.9
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 8.0e-95 351.7 435 46.7
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 5.7e-93 345.5 430 45.8
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.7e-92 344.0 447 45.2
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 2.8e-92 343.2 437 46.5
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.1e-91 341.3 435 45.5
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 1.4e-91 340.9 425 47.3
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 9.1e-91 338.2 417 48.0
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.6e-90 337.4 270 68.1
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.3e-89 334.3 437 45.8
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.1e-88 331.3 270 67.4
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 5.5e-88 328.9 430 46.5
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 1.6e-87 327.4 401 46.4
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 8.0e-87 325.1 437 43.7
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 5.7e-85 318.9 378 47.1
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 2.2e-84 317.0 428 42.1
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 4.8e-84 315.8 406 46.1
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 8.2e-84 315.1 382 46.6
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 1.1e-83 314.7 426 46.5
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 3.1e-83 313.2 383 47.0
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 3.1e-83 313.2 380 45.8
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 9.1e-83 311.6 435 43.4
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 3.2e-80 303.1 384 44.8
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 3.2e-80 303.1 427 42.2
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 5.5e-80 302.4 381 44.4
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 5.5e-80 302.4 430 43.5
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 9.4e-80 301.6 436 43.6
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 2.7e-79 300.1 457 42.9
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 3.6e-79 299.7 419 44.2
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 3.6e-79 299.7 457 42.9
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 1.4e-78 297.7 416 43.3
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 2.0e-77 293.9 429 42.9
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 4.4e-77 292.7 429 42.9
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 7.5e-77 292.0 423 40.9
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 9.8e-77 291.6 443 40.2
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 1.2e-74 284.6 425 40.2
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 2.7e-74 283.5 426 39.4
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 5.0e-73 279.3 527 35.7
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 3.3e-72 276.6 432 42.1
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 3.3e-72 276.6 398 44.0
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 7.2e-72 275.4 399 42.9
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 2.8e-71 273.5 439 38.5
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 1.0e-70 271.6 404 42.3
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 4.0e-70 269.6 411 41.4
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 2.0e-69 267.3 441 39.9
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 5.7e-69 265.8 426 38.5
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 3.7e-68 263.1 380 41.1
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 1.8e-67 260.8 427 37.7
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 9.2e-67 258.5 331 44.4
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 3.5e-66 256.5 400 39.0
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 7.8e-66 255.4 438 37.0
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 1.7e-65 254.2 438 36.1
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 2.9e-65 253.4 382 40.1
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 2.9e-65 253.4 382 40.1
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 2.9e-65 253.4 535 36.3
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 8.6e-65 251.9 391 39.4
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 2.1e-63 247.3 408 37.7
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 2.8e-63 246.9 398 38.9
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 3.0e-62 243.4 427 37.5
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 8.9e-62 241.9 410 38.0
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 8.9e-62 241.9 332 42.2
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 3.4e-61 240.0 377 39.8
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 3.4e-61 240.0 324 42.9
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 4.4e-61 239.6 417 36.9
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 4.4e-61 239.6 425 36.9
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 9.8e-61 238.4 373 38.9
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 1.1e-59 235.0 403 37.0
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 4.6e-58 229.6 264 45.8
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 4.7e-55 219.5 407 34.2
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 1.2e-53 214.9 379 35.6
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 6.4e-52 209.1 428 34.8
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 8.3e-52 208.8 427 36.3
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 1.9e-51 207.6 428 34.3
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 1.9e-51 207.6 369 40.4
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 4.6e-50 203.0 420 35.0
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 5.6e-48 196.1 270 42.2
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 1.1e-46 191.8 187 54.5
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 5.2e-46 189.5 263 42.2
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 2.0e-45 187.6 157 66.2
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 9.9e-45 185.3 286 42.7
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 1.7e-44 184.5 419 32.7
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 2.2e-44 184.1 257 45.1
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 3.0e-41 173.7 256 39.5
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 1.9e-40 171.0 402 33.3
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 5.2e-38 162.9 311 37.3
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 1.9e-35 154.5 137 56.9
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 1.6e-34 151.4 322 36.0
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.7e-34 150.6 340 34.1
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 6.0e-34 149.4 322 35.7
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 1.7e-33 147.9 259 39.8
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 4.0e-30 136.7 239 40.6
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 9.9e-29 132.1 255 36.5
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 1.6e-23 114.8 263 35.4
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 2.4e-22 110.9 121 49.6
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 5.3e-22 109.8 76 73.7
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 7.1e-19 99.4 242 32.2
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 7.9e-18 95.9 279 28.3
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.6e-15 88.2 260 31.9
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 2.1e-15 87.8 64 64.1
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 2.1e-15 87.8 64 64.1
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 1.9e-11 74.7 95 42.1
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 6.0e-10 69.7 138 36.2
Mapoly0008s0044 Marchantia polymorpha HOM05D006138 ORTHO05D007778 8.7e-09 65.9 277 22.4
CSS0037607 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 6.2e-07 59.7 42 66.7
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 1.8e-06 58.2 90 36.7
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 2.4e-06 57.8 148 32.4


User provided reference genes

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