Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15556 Vaccinium macrocarpon HOM05D002516 ORTHO05D020235 1.5e-81 306.2 163 100.0
Rhsim02G0060800 Rhododendron simsii HOM05D002516 ORTHO05D002703 1.7e-53 213.0 174 66.7
Actinidia11450 Actinidia chinensis HOM05D002516 ORTHO05D002703 9.4e-44 180.6 167 61.1
CSS0013742 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 1.5e-33 146.7 173 52.6
Hma1.2p1_2877F.1_g329780 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 4.4e-25 118.6 171 46.2
Dinv38194 Davidia involucrata HOM05D002516 ORTHO05D002703 1.8e-23 113.2 151 45.7
Nn3g20050 Nelumbo nucifera HOM05D002516 ORTHO05D002703 3.7e-16 89.0 166 38.6
Hma1.2p1_1660F.1_g296190 Hydrangea macrophylla HOM05D002516 ORTHO05D020235 4.1e-15 85.5 90 55.6
Hma1.2p1_2877F.1_g329775 Hydrangea macrophylla HOM05D002516 ORTHO05D020235 4.1e-15 85.5 90 55.6
TAR365G0852 Trochodendron aralioides HOM05D002516 ORTHO05D002703 7.8e-14 81.3 175 37.1
CSS0018676 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D020235 1.7e-13 80.1 79 53.2
Solyc06g007870.3 Solanum lycopersicum HOM05D002516 ORTHO05D002703 6.6e-13 78.2 169 37.9
Sopen06g002720 Solanum pennellii HOM05D002516 ORTHO05D002703 1.5e-12 77.0 169 37.9
Lj6A392G26 Lonicera japonica HOM05D002516 ORTHO05D020235 1.9e-12 76.6 91 50.5
PGSC0003DMG400003404 Solanum tuberosum HOM05D002516 ORTHO05D002703 7.3e-12 74.7 174 36.2
TAR636G2916 Trochodendron aralioides HOM05D002516 ORTHO05D002703 9.5e-12 74.3 168 35.1
Oeu002916.1 Olea europaea HOM05D002516 ORTHO05D020235 1.6e-11 73.6 114 44.7
Eucgr.K02140 Eucalyptus grandis HOM05D002516 ORTHO05D002703 2.1e-11 73.2 167 32.9
Nn1g07949 Nelumbo nucifera HOM05D002516 ORTHO05D002703 4.7e-11 72.0 166 33.7
Actinidia09470 Actinidia chinensis HOM05D002516 ORTHO05D002703 2.3e-10 69.7 165 35.2
Hma1.2p1_0226F.1_g095436 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 2.3e-10 69.7 162 37.0
Nitab4.5_0007846g0010 Nicotiana tabacum HOM05D002516 ORTHO05D002703 4.0e-10 68.9 172 34.3
Hund05574 Selenicereus undatus HOM05D002516 ORTHO05D002703 5.2e-10 68.6 172 34.9
Hma1.2p1_2668F.1_g326570 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 1.2e-09 67.4 162 36.4
Peaxi162Scf00238g00046 Petunia axillaris HOM05D002516 ORTHO05D002703 1.2e-09 67.4 173 34.7
Aqoxy2G04001 Aquilegia oxysepala HOM05D002516 ORTHO05D002703 1.5e-09 67.0 133 39.1
Nitab4.5_0002641g0170 Nicotiana tabacum HOM05D002516 ORTHO05D002703 1.5e-09 67.0 163 33.7
Dinv19179 Davidia involucrata HOM05D002516 ORTHO05D002703 2.6e-09 66.2 166 35.5
Nitab4.5_0000045g0450 Nicotiana tabacum HOM05D002516 ORTHO05D002703 2.6e-09 66.2 172 34.9
Nitab4.5_0002616g0040 Nicotiana tabacum HOM05D002516 ORTHO05D002703 2.6e-09 66.2 163 33.1
Rhsim01G0254000 Rhododendron simsii HOM05D002516 ORTHO05D002703 1.3e-08 63.9 180 29.4
Peaxi162Scf00372g01213 Petunia axillaris HOM05D002516 ORTHO05D002703 1.7e-08 63.5 117 35.0
AUR62001129 Chenopodium quinoa HOM05D002516 ORTHO05D002703 2.9e-08 62.8 114 39.5
Rhsim13G0047300 Rhododendron simsii HOM05D002516 ORTHO05D002703 2.9e-08 62.8 167 33.5
Ca_03039_v3 Cicer arietinum L. HOM05D002516 ORTHO05D002703 3.7e-08 62.4 170 32.4
PGR083G1441 Punica granatum HOM05D002516 ORTHO05D002703 4.9e-08 62.0 177 31.6
Actinidia39434 Actinidia chinensis HOM05D002516 ORTHO05D002703 1.1e-07 60.8 164 34.8
Sopen09g022610 Solanum pennellii HOM05D002516 ORTHO05D002703 1.9e-07 60.1 168 39.3
MSTRG.18838 Avicennia marina HOM05D002516 ORTHO05D002703 2.4e-07 59.7 175 30.3
vmacro02780 Vaccinium macrocarpon HOM05D002516 ORTHO05D002703 3.2e-07 59.3 163 35.0
MELO3C022715.2 Cucumis melo HOM05D002516 ORTHO05D002703 4.1e-07 58.9 164 35.4
CsaV3_3G030010 Cucumis sativus L. HOM05D002516 ORTHO05D002703 4.1e-07 58.9 164 35.4
DCAR_004734 Daucus carota HOM05D002516 ORTHO05D002703 4.1e-07 58.9 167 36.5
ECA247G3682 Erigeron canadensis HOM05D002516 ORTHO05D002703 4.1e-07 58.9 177 38.4
CSS0005528 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 7.1e-07 58.2 176 33.0
CiPaw.01G049600 Carya illinoinensis HOM05D002516 ORTHO05D002703 9.2e-07 57.8 170 32.9
AUR62016552 Chenopodium quinoa HOM05D002516 ORTHO05D002703 2.1e-06 56.6 116 39.7
HanXRQChr07g0189501 Helianthus annuus HOM05D002516 ORTHO05D002703 2.1e-06 56.6 176 35.8
PGSC0003DMG400027947 Solanum tuberosum HOM05D002516 ORTHO05D002703 2.1e-06 56.6 168 40.5
Actinidia30057 Actinidia chinensis HOM05D002516 ORTHO05D002703 2.7e-06 56.2 164 30.5
CDE05G1738 Ceratophyllum demersum HOM05D002516 ORTHO05D002703 2.7e-06 56.2 144 31.9
Dinv12654 Davidia involucrata HOM05D002516 ORTHO05D002703 2.7e-06 56.2 169 37.3
TPR.G21567 Trifolium pratense HOM05D002516 ORTHO05D002703 2.7e-06 56.2 177 31.1
CSS0033368 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 4.6e-06 55.5 195 28.2
Lj6A407T20 Lonicera japonica HOM05D002516 ORTHO05D020235 4.6e-06 55.5 64 48.4
TAR362G0418 Trochodendron aralioides HOM05D002516 ORTHO05D002703 6.0e-06 55.1 45 60.0


User provided reference genes

Program Settings