Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 5.9e-113 411.0 225 100.0
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 5.8e-76 288.1 204 82.4
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 3.1e-45 186.0 269 50.9
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 4.5e-44 182.2 227 53.3
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 1.9e-42 176.8 229 51.1
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.2e-41 174.1 223 50.7
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 3.5e-41 172.6 222 51.4
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.0e-40 169.5 222 50.0
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 5.1e-40 168.7 229 48.0
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.5e-39 167.2 222 49.5
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 5.7e-39 165.2 213 50.2
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.6e-38 163.7 215 49.3
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 2.1e-38 163.3 212 51.4
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 2.1e-38 163.3 223 48.0
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.7e-38 162.5 222 49.5
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 3.7e-38 162.5 213 54.0
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 6.3e-38 161.8 222 47.3
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 8.2e-38 161.4 222 49.1
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 8.2e-38 161.4 222 49.1
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.4e-37 160.6 202 49.5
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 3.1e-37 159.5 220 50.0
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 4.1e-37 159.1 169 61.5
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 4.1e-37 159.1 208 51.9
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.0e-36 156.8 207 50.7
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.0e-36 156.8 212 51.4
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 3.4e-36 156.0 224 49.6
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 4.5e-36 155.6 178 53.9
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 7.6e-36 154.8 193 51.3
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 7.6e-36 154.8 211 51.7
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.7e-35 153.7 227 44.1
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 2.2e-35 153.3 216 52.3
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.2e-35 153.3 213 50.2
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 3.8e-35 152.5 211 48.8
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 5.0e-35 152.1 216 51.9
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 5.0e-35 152.1 231 46.8
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 8.4e-35 151.4 183 53.6
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.1e-34 151.0 246 44.7
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.4e-34 150.6 216 47.2
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 1.9e-34 150.2 232 46.1
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.9e-34 150.2 216 47.2
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.5e-34 149.8 217 47.9
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 3.2e-34 149.4 216 48.1
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 4.2e-34 149.1 221 46.6
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 5.5e-34 148.7 203 50.7
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.6e-33 147.1 228 45.2
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 2.1e-33 146.7 224 47.8
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 2.1e-33 146.7 218 46.3
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.1e-33 146.7 195 51.3
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 4.6e-33 145.6 215 47.4
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 4.6e-33 145.6 223 46.2
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 7.9e-33 144.8 220 44.5
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 1.3e-32 144.1 234 44.4
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.3e-32 144.1 207 47.3
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.8e-32 143.7 225 45.3
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.0e-32 142.9 102 76.5
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.0e-32 142.9 246 43.9
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 3.9e-32 142.5 231 45.0
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 3.9e-32 142.5 227 47.6
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 1.1e-31 141.0 219 46.6
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 1.5e-31 140.6 214 44.9
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.5e-31 140.6 215 45.1
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 1.9e-31 140.2 193 48.7
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 2.5e-31 139.8 239 44.4
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 3.3e-31 139.4 235 43.0
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 4.3e-31 139.0 215 46.0
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.3e-30 137.5 231 41.1
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 1.3e-30 137.5 154 60.4
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 2.2e-30 136.7 197 49.7
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.8e-30 136.3 228 42.5
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.8e-30 136.3 220 46.8
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 8.2e-30 134.8 215 41.9
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 1.4e-29 134.0 210 46.7
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 1.8e-29 133.7 227 46.3
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.8e-29 133.7 214 48.1
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.4e-29 133.3 214 48.1
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 1.2e-28 131.0 220 42.3
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.5e-28 130.6 181 47.5
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 2.6e-28 129.8 186 47.8
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 4.5e-28 129.0 230 40.9
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.0e-27 127.9 187 47.1
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 2.2e-27 126.7 230 40.9
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 5.0e-27 125.6 201 43.8
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 6.5e-27 125.2 192 48.4
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.1e-26 124.4 171 52.0
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 1.4e-26 124.0 220 42.3
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 5.5e-26 122.1 233 39.9
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.8e-24 117.1 213 44.6
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 2.3e-24 116.7 113 58.4
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 6.7e-24 115.2 124 57.3
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.3e-23 112.8 225 42.2
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 3.3e-23 112.8 216 37.5
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 5.7e-23 112.1 203 42.9
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 4.8e-22 109.0 193 43.5
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 6.3e-22 108.6 250 38.4
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 3.1e-21 106.3 112 53.6
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 6.9e-21 105.1 102 59.8
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 1.2e-20 104.4 88 59.1
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 3.4e-20 102.8 188 44.7
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 4.5e-20 102.4 199 45.2
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.3e-19 100.9 208 43.8
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.3e-19 100.9 208 43.8
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 5.0e-19 99.0 204 43.6
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 6.5e-19 98.6 208 43.8
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 8.5e-19 98.2 219 41.1
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 8.5e-19 98.2 208 43.3
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.1e-18 97.8 208 42.8
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 1.4e-18 97.4 187 42.2
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 4.2e-18 95.9 208 41.3
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 9.4e-18 94.7 201 39.8
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.2e-17 94.4 199 42.2
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.6e-17 94.0 199 43.7
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.6e-17 94.0 199 43.7
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.6e-17 94.0 199 43.7
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.0e-16 91.3 208 42.8
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 6.7e-16 88.6 208 40.9
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 7.4e-15 85.1 184 38.0
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 9.7e-15 84.7 197 39.1
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 9.7e-15 84.7 191 34.6
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.3e-14 84.3 165 40.0
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.7e-14 84.0 133 44.4
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 6.3e-14 82.0 207 38.6
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 8.2e-14 81.6 213 34.7
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 1.4e-13 80.9 116 47.4
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 7.0e-13 78.6 210 39.0
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.6e-12 77.4 190 35.8
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 2.2e-11 73.6 221 35.3
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 4.0e-08 62.8 139 40.3
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 5.2e-08 62.4 129 41.1
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 9.7e-07 58.2 219 35.6


User provided reference genes

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