Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 2.4e-33 144.8 69 100.0
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 2.4e-33 144.8 69 100.0
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 1.6e-16 89.0 69 63.8
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 1.6e-16 89.0 69 63.8
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 4.3e-14 80.9 71 59.2
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 1.3e-13 79.3 69 56.5
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.3e-13 79.3 57 64.9
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.6e-13 79.0 57 63.2
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 2.1e-13 78.6 59 62.7
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 2.8e-13 78.2 59 61.0
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 3.6e-13 77.8 69 58.0
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 8.1e-13 76.6 68 52.9
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.1e-12 76.3 54 64.8
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 1.1e-12 76.3 69 53.6
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 1.1e-12 76.3 71 53.5
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 1.8e-12 75.5 70 54.3
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.8e-12 75.5 60 55.0
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 2.4e-12 75.1 58 62.1
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 2.4e-12 75.1 60 56.7
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 2.4e-12 75.1 69 53.6
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 2.4e-12 75.1 70 58.6
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 2.4e-12 75.1 57 59.6
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 2.4e-12 75.1 57 59.6
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 3.1e-12 74.7 60 55.0
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 3.1e-12 74.7 69 53.6
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 4.0e-12 74.3 61 60.7
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 4.0e-12 74.3 57 57.9
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 4.0e-12 74.3 57 57.9
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 4.0e-12 74.3 57 57.9
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 4.0e-12 74.3 57 57.9
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 4.0e-12 74.3 57 57.9
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 6.9e-12 73.6 69 53.6
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 9.0e-12 73.2 57 56.1
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 9.0e-12 73.2 71 54.9
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 1.2e-11 72.8 57 52.6
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 1.2e-11 72.8 73 54.8
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 1.5e-11 72.4 57 56.1
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 1.5e-11 72.4 69 53.6
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 1.5e-11 72.4 69 53.6
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 1.5e-11 72.4 69 53.6
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 2.0e-11 72.0 57 54.4
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 2.0e-11 72.0 60 58.3
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 2.0e-11 72.0 69 50.7
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 2.0e-11 72.0 69 47.8
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 3.4e-11 71.2 57 56.1
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 3.4e-11 71.2 57 54.4
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 3.4e-11 71.2 60 56.7
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 4.5e-11 70.9 73 53.4
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 4.5e-11 70.9 69 52.2
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 4.5e-11 70.9 60 51.7
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 4.5e-11 70.9 62 56.5
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 4.5e-11 70.9 57 56.1
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 5.8e-11 70.5 57 54.4
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 5.8e-11 70.5 58 63.8
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 5.8e-11 70.5 51 64.7
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.3e-10 69.3 57 54.4
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.3e-10 69.3 57 54.4
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.7e-10 68.9 60 55.0
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 2.2e-10 68.6 57 54.4
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.9e-10 68.2 46 69.6
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 2.9e-10 68.2 61 57.4
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 3.8e-10 67.8 53 58.5
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 3.8e-10 67.8 71 50.7
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 4.9e-10 67.4 69 50.7
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 4.9e-10 67.4 55 60.0
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 4.9e-10 67.4 55 60.0
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.4e-10 67.0 69 52.2
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 6.4e-10 67.0 60 55.0
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.4e-10 67.0 54 59.3
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.4e-10 67.0 54 59.3
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 8.4e-10 66.6 77 46.8
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 8.4e-10 66.6 51 56.9
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 1.4e-09 65.9 60 55.0
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.4e-09 65.9 55 58.2
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.4e-09 65.9 55 58.2
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.9e-09 65.5 57 50.9
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 2.4e-09 65.1 57 54.4
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 2.4e-09 65.1 55 50.9
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 3.2e-09 64.7 57 49.1
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 3.2e-09 64.7 57 49.1
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.2e-09 64.7 69 49.3
Gohir.D08G046000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.2e-09 64.7 69 50.7
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.2e-09 64.7 60 51.7
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.2e-09 64.7 69 49.3
Gorai.008G094700 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.2e-09 64.7 69 50.7
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.2e-09 64.7 57 56.1
Gorai.011G088300 Gossypium raimondii HOM05D006167 ORTHO05D007635 5.4e-09 63.9 69 50.7
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 7.1e-09 63.5 60 50.0
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 9.3e-09 63.2 57 47.4
Gorai.011G155100 Gossypium raimondii HOM05D006167 ORTHO05D007635 9.3e-09 63.2 59 54.2
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 9.3e-09 63.2 60 51.7
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 1.2e-08 62.8 55 54.5
Gorai.007G213200 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.2e-08 62.8 60 51.7
Gorai.009G336300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.2e-08 62.8 69 47.8
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.6e-08 62.4 61 50.8
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 2.1e-08 62.0 53 54.7
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 2.1e-08 62.0 53 54.7
Gohir.D03G098800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.1e-08 62.0 60 51.7
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.1e-08 62.0 60 48.3
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 2.7e-08 61.6 69 47.8
Gohir.D05G314750 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.0e-08 60.5 69 46.4
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 7.9e-08 60.1 54 57.4
Gohir.D10G139400 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.9e-08 60.1 69 46.4
Gorai.005G130300 Gossypium raimondii HOM05D006167 ORTHO05D007635 7.9e-08 60.1 60 51.7
Gohir.D04G080000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.0e-07 59.7 57 52.6
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 1.8e-07 58.9 74 44.6
Gorai.003G103700 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.3e-07 58.5 60 48.3
Sc13g0003020 Simmondsia chinensis HOM05D006167 ORTHO05D007635 2.3e-07 58.5 62 48.4
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 2.3e-07 58.5 52 53.8
Gohir.D01G140700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.0e-07 58.2 57 50.9
Gohir.D02G123800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.7e-07 57.0 69 44.9
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 6.7e-07 57.0 53 47.2
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 1.1e-06 56.2 55 50.9
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 3.3e-06 54.7 57 47.4


User provided reference genes

Program Settings