Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 1.5e-87 326.2 173 100.0
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 5.1e-56 221.5 172 71.5
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 2.1e-54 216.1 173 71.1
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 1.1e-53 213.8 172 69.8
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 4.5e-52 208.4 173 69.4
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 3.9e-48 195.3 147 76.2
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 1.8e-45 186.4 169 61.5
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 1.2e-41 173.7 164 61.0
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 5.1e-40 168.3 174 57.5
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 5.7e-39 164.9 165 60.0
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 1.3e-38 163.7 170 57.1
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 1.7e-38 163.3 165 57.6
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 1.8e-37 159.8 170 55.3
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 4.1e-37 158.7 171 55.0
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 4.1e-37 158.7 169 55.0
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 6.9e-37 157.9 173 56.6
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 9.1e-37 157.5 171 56.1
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 2.0e-36 156.4 167 57.5
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 2.6e-36 156.0 167 58.1
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 4.5e-36 155.2 177 57.6
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 5.9e-36 154.8 174 55.2
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 7.7e-36 154.5 184 51.1
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 1.0e-35 154.1 167 52.7
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 1.3e-35 153.7 184 50.5
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 1.3e-35 153.7 170 52.4
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 1.3e-35 153.7 168 53.0
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 2.2e-35 152.9 172 55.8
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 5.0e-35 151.8 167 55.1
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 5.0e-35 151.8 170 52.9
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 6.5e-35 151.4 174 54.0
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 6.5e-35 151.4 174 55.2
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 1.4e-34 150.2 170 53.5
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 1.9e-34 149.8 170 52.4
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 2.5e-34 149.4 173 55.5
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 7.2e-34 147.9 171 52.6
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 9.4e-34 147.5 167 53.9
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 9.4e-34 147.5 174 53.4
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 6.1e-33 144.8 161 53.4
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 1.4e-32 143.7 173 50.9
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 1.4e-32 143.7 168 50.6
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 3.0e-32 142.5 169 53.8
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 3.9e-32 142.1 172 51.2
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 5.1e-32 141.7 173 52.0
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 8.8e-32 141.0 162 54.3
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 1.1e-31 140.6 172 50.6
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 1.1e-31 140.6 175 51.4
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 1.1e-31 140.6 170 52.4
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 1.5e-31 140.2 170 52.9
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 2.0e-31 139.8 176 53.4
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 3.3e-31 139.0 173 51.4
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 4.4e-31 138.7 173 51.4
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 2.2e-30 136.3 170 50.0
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 2.8e-30 136.0 172 49.4
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 2.8e-30 136.0 174 52.9
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 2.8e-30 136.0 169 51.5
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 4.8e-30 135.2 173 50.3
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 8.2e-30 134.4 175 49.7
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 8.2e-30 134.4 174 50.6
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 4.1e-29 132.1 165 50.9
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 7.0e-29 131.3 170 50.0
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 1.5e-28 130.2 167 49.1
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 2.0e-28 129.8 167 48.5
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 7.7e-28 127.9 165 49.1
AUR62015239 Chenopodium quinoa HOM05D006603 ORTHO05D007786 7.7e-28 127.9 142 54.9
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 1.3e-27 127.1 164 51.2
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 1.7e-27 126.7 116 63.8
Ah.04g153810 Amaranthus hybridus HOM05D006603 ORTHO05D007786 6.5e-27 124.8 131 52.7
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 1.1e-26 124.0 175 50.3
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 1.5e-26 123.6 115 60.9
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 3.2e-26 122.5 162 49.4
AUR62018035 Chenopodium quinoa HOM05D006603 ORTHO05D007786 5.5e-26 121.7 134 53.7
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 7.2e-26 121.3 165 48.5
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 7.2e-26 121.3 165 47.9
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 9.4e-26 120.9 171 48.0
Nitab4.5_0001041g0010 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.2e-25 120.6 134 53.7
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 2.7e-25 119.4 163 46.6
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 6.1e-25 118.2 115 60.9
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 8.0e-25 117.9 135 51.9
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 1.4e-24 117.1 165 47.3
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 2.3e-24 116.3 174 44.8
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 3.0e-24 115.9 172 45.3
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 3.0e-24 115.9 114 59.6
unitig_32.g11693 Utricularia gibba HOM05D006603 ORTHO05D007786 3.0e-24 115.9 181 42.0
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 4.0e-24 115.5 165 46.7
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 5.2e-24 115.2 164 48.2
SalBow2G0496 Salvia bowleyana HOM05D006603 ORTHO05D007786 6.7e-24 114.8 150 50.0
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 4.4e-23 112.1 132 47.7
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 5.7e-23 111.7 136 49.3
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 5.7e-23 111.7 102 64.7
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 7.5e-23 111.3 166 45.2
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 9.7e-23 110.9 136 50.0
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 9.7e-23 110.9 108 58.3
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 1.1e-21 107.5 117 54.7
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 3.1e-21 105.9 156 45.5
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 4.1e-21 105.5 161 47.2
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 9.1e-21 104.4 160 43.1
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 1.7e-19 100.1 99 58.6
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.7e-19 100.1 115 53.0
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 3.2e-18 95.9 169 43.2
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 4.2e-18 95.5 169 43.2
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 4.2e-18 95.5 169 43.2
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 7.2e-18 94.7 169 42.6
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 1.6e-17 93.6 130 46.9
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 6.1e-17 91.7 162 42.6
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 6.1e-17 91.7 169 42.6
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 6.1e-17 91.7 142 44.4
Nn1g02998 Nelumbo nucifera HOM05D006603 ORTHO05D007786 1.8e-16 90.1 75 62.7
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 5.2e-16 88.6 139 43.2
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 6.8e-16 88.2 152 40.1
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 6.8e-16 88.2 159 42.8
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 2.6e-15 86.3 165 35.8
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 9.8e-15 84.3 137 43.8
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 1.3e-14 84.0 142 43.7
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 5.4e-13 78.6 127 44.9
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 2.0e-12 76.6 114 48.2
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 7.7e-12 74.7 81 50.6
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 1.7e-11 73.6 114 47.4
GSVIVG01027940001 Vitis vinifera HOM05D006603 ORTHO05D015671 2.5e-10 69.7 79 54.4
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 2.7e-09 66.2 103 39.8
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 4.7e-09 65.5 83 48.2
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 1.0e-08 64.3 83 48.2
QL06p021608 Quercus lobata HOM05D006603 ORTHO05D007786 1.2e-07 60.8 54 57.4
C08p52130 Brassica napus HOM05D000117 ORTHO05D001036 2.6e-07 59.7 107 40.2
Mapoly0020s0146 Marchantia polymorpha HOM05D002103 ORTHO05D007786 3.4e-07 59.3 163 31.3
Hma1.2p1_0982F.1_g243900 Hydrangea macrophylla HOM05D002103 ORTHO05D004020 8.3e-06 54.7 165 27.3


User provided reference genes

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