Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15435 Vaccinium macrocarpon HOM05D003739 ORTHO05D003996 0.0e+00 1700.6 879 100.0
Actinidia35828 Actinidia chinensis HOM05D003739 ORTHO05D003996 7.1e-146 522.3 775 46.5
CSS0038123 Camellia sinensis var. sinensis HOM05D003739 ORTHO05D003996 3.7e-142 510.0 832 44.2
Actinidia20856 Actinidia chinensis HOM05D003739 ORTHO05D003996 9.4e-90 335.9 439 48.5
GSVIVG01023816001 Vitis vinifera HOM05D003739 ORTHO05D003996 1.8e-77 295.0 845 34.9
TAR628G0054 Trochodendron aralioides HOM05D003739 ORTHO05D003996 8.3e-70 269.6 913 31.5
Cc09_g05210 Coffea canephora HOM05D003739 ORTHO05D003996 1.5e-66 258.8 816 34.2
MSTRG.9105 Avicennia marina HOM05D003739 ORTHO05D003996 6.8e-64 250.0 819 32.0
Oeu005537.3 Olea europaea HOM05D003739 ORTHO05D003996 5.8e-63 246.9 833 31.3
Nitab4.5_0004903g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 1.4e-61 242.3 733 31.9
Peaxi162Scf00048g01417 Petunia axillaris HOM05D003739 ORTHO05D003996 3.2e-61 241.1 830 30.8
Sopen02g026250 Solanum pennellii HOM05D003739 ORTHO05D003996 1.0e-59 236.1 831 30.4
Nitab4.5_0006794g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 3.0e-59 234.6 741 31.0
Ciclev10027900m.g Citrus clementina HOM05D003739 ORTHO05D003996 1.4e-56 225.7 835 30.9
Nn4g24182 Nelumbo nucifera HOM05D003739 ORTHO05D003996 1.9e-53 215.3 854 30.7
CANSAT54G2857 Cannabis sativa HOM05D003739 ORTHO05D003996 2.1e-52 211.8 825 29.3
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 2.7e-52 211.5 843 29.7
Nitab4.5_0010401g0020 Nicotiana tabacum HOM05D003739 ORTHO05D003996 1.7e-51 208.8 777 27.9
Cfa005045 Carpinus fangiana HOM05D003739 ORTHO05D003996 5.1e-51 207.2 978 29.6
PGSC0003DMG402017733 Solanum tuberosum HOM05D003739 ORTHO05D003996 5.1e-51 207.2 822 28.0
QL11p044151 Quercus lobata HOM05D003739 ORTHO05D003996 8.6e-51 206.5 833 29.8
CAN.G809.70 Capsicum annuum HOM05D003739 ORTHO05D003996 1.3e-46 192.6 764 29.2
TWI79G1707 Tripterygium wilfordii HOM05D003739 ORTHO05D003996 1.3e-46 192.6 808 28.7
Manes.11G084700 Manihot esculenta HOM05D003739 ORTHO05D003996 1.0e-43 183.0 768 27.9
CANSAT11G0250 Cannabis sativa HOM05D003739 ORTHO05D003996 2.3e-43 181.8 766 30.0
Cpa.g.sc14.123 Carica papaya HOM05D003739 ORTHO05D003996 1.9e-42 178.7 742 29.2
Lj8C306T17 Lonicera japonica HOM05D003739 ORTHO05D003996 2.5e-42 178.3 707 29.1
Dinv05658 Davidia involucrata HOM05D003739 ORTHO05D003996 3.3e-42 177.9 621 31.2
CiPaw.10G121500 Carya illinoinensis HOM05D003739 ORTHO05D003996 1.3e-41 176.0 655 31.3
Dinv05659 Davidia involucrata HOM05D003739 ORTHO05D003996 1.3e-41 176.0 194 56.2
Sed0001527 Sechium edule HOM05D003739 ORTHO05D003996 5.8e-39 167.2 803 28.5
SGA_v2.0_scaffold62G21539 Striga asiatica HOM05D003739 ORTHO05D003996 1.7e-38 165.6 812 27.5
Migut.F00900 Erythranthe guttata HOM05D003739 ORTHO05D003996 2.2e-38 165.2 852 28.2
Hma1.2p1_1073F.1_g254250 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 1.9e-37 162.2 178 51.7
CiPaw.06G133400 Carya illinoinensis HOM05D003739 ORTHO05D003996 4.2e-37 161.0 644 30.9
Potri.010G019600 Populus trichocarpa HOM05D003739 ORTHO05D003996 1.3e-35 156.0 935 25.0
Prupe.8G091800 Prunus persica HOM05D003739 ORTHO05D003996 3.9e-35 154.5 851 26.6
TAR376G0790 Trochodendron aralioides HOM05D003739 ORTHO05D003996 5.1e-35 154.1 385 38.2
PSO675G5166 Papaver somniferum HOM05D003739 ORTHO05D003996 4.3e-34 151.0 783 27.8
ClCG01G008230 Citrullus lanatus HOM05D003739 ORTHO05D003996 1.6e-33 149.1 833 27.3
arahy.Tifrunner.gnm1.ann1.H3NIN5 Arachis hypogaea HOM05D003739 ORTHO05D003996 3.6e-33 147.9 748 29.4
RcHm_v2.0_Chr6g0265811 Rosa chinensis HOM05D003739 ORTHO05D003996 1.8e-32 145.6 821 25.0
Duzib187G1144 Durio zibethinus HOM05D003739 ORTHO05D003996 3.1e-32 144.8 726 26.4
COL.COLO4_32233 Corchorus olitorius HOM05D003739 ORTHO05D003996 6.9e-32 143.7 864 25.7
Thecc.08G060300 Theobroma cacao HOM05D003739 ORTHO05D003996 6.9e-32 143.7 777 25.4
ECA234G4722 Erigeron canadensis HOM05D003739 ORTHO05D003996 1.5e-31 142.5 505 30.3
RcHm_v2.0_Chr5g0054461 Rosa chinensis HOM05D003739 ORTHO05D003996 1.5e-31 142.5 819 25.0
MD10G1070200 Malus domestica HOM05D003739 ORTHO05D003996 3.4e-31 141.4 787 26.3
Atru.chr12.1298 Acer truncatum HOM05D003739 ORTHO05D003996 5.8e-31 140.6 576 30.0
AUR62005990 Chenopodium quinoa HOM05D003739 ORTHO05D003996 7.6e-31 140.2 823 25.5
Gorai.006G107300 Gossypium raimondii HOM05D003739 ORTHO05D003996 7.6e-31 140.2 610 29.3
AUR62028080 Chenopodium quinoa HOM05D003739 ORTHO05D003996 1.3e-30 139.4 550 29.8
PGR042G2822 Punica granatum HOM05D003739 ORTHO05D003996 1.3e-30 139.4 690 29.4
PSO339G5323 Papaver somniferum HOM05D003739 ORTHO05D003996 6.4e-30 137.1 825 26.7
CsaV3_5G020720 Cucumis sativus L. HOM05D003739 ORTHO05D003996 1.4e-29 136.0 845 26.6
Gohir.D09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 2.4e-29 135.2 612 28.9
VMungo1215G1752 Vigna mungo HOM05D003739 ORTHO05D003996 2.7e-28 131.7 266 37.2
Sabra10G0016300 Salix brachista HOM05D003739 ORTHO05D003996 1.0e-27 129.8 799 26.0
CDE06G1699 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 6.7e-27 127.1 313 32.9
Atru.chr5.3065 Acer truncatum HOM05D003739 ORTHO05D003996 2.5e-26 125.2 402 32.1
Lsat_1_v5_gn_5_112881 Lactuca sativa HOM05D003739 ORTHO05D003996 4.3e-26 124.4 639 28.5
LjContig00222g0016564 Lotus japonicus HOM05D003739 ORTHO05D003996 5.6e-26 124.0 324 35.2
Hund09717 Selenicereus undatus HOM05D003739 ORTHO05D003996 5.6e-26 124.0 817 26.4
Aqoxy2G03991 Aquilegia oxysepala HOM05D003739 ORTHO05D003996 7.4e-26 123.6 812 25.7
Sed0009728 Sechium edule HOM05D003739 ORTHO05D003996 9.6e-26 123.2 347 31.7
Psat7g051640 Pisum sativum HOM05D003739 ORTHO05D003996 1.3e-25 122.9 239 38.9
DCAR_004344 Daucus carota HOM05D003739 ORTHO05D003996 2.1e-25 122.1 823 25.6
Lalb_Chr11g0068001 Lupinus albus HOM05D003739 ORTHO05D003996 1.1e-24 119.8 323 33.4
SalBow6G4317 Salvia bowleyana HOM05D003739 ORTHO05D003996 1.1e-24 119.8 480 26.9
BcaNung03888 Brassica carinata HOM05D003739 ORTHO05D003996 1.5e-23 115.9 287 34.1
A08p23790 Brassica napus HOM05D003739 ORTHO05D003996 1.5e-23 115.9 307 33.9
FvH4_2g09520 Fragaria vesca HOM05D003739 ORTHO05D003996 1.5e-23 115.9 805 24.5
AL7G11100 Arabidopsis lyrata HOM05D003739 ORTHO05D003996 2.6e-23 115.2 637 27.9
C03p77640 Brassica napus HOM05D003739 ORTHO05D003996 2.6e-23 115.2 299 33.4
BolC3t20021H Brassica oleracea HOM05D003739 ORTHO05D003996 2.6e-23 115.2 299 33.4
Hund09716 Selenicereus undatus HOM05D003739 ORTHO05D003996 2.6e-23 115.2 817 23.9
EL10Ac3g05170 Beta vulgaris HOM05D003739 ORTHO05D003996 4.5e-23 114.4 789 25.3
BraA08t34331Z Brassica rapa HOM05D003739 ORTHO05D003996 5.8e-23 114.0 309 33.0
Glyma.01G228200 Glycine max HOM05D003739 ORTHO05D003996 5.8e-23 114.0 776 26.2
BolC7t46745H Brassica oleracea HOM05D003739 ORTHO05D003996 1.0e-22 113.2 298 35.6
BcaC01g00285 Brassica carinata HOM05D000394 ORTHO05D000299 1.7e-22 112.5 298 32.9
FAN27G2905 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.2e-22 112.1 809 23.5
BcaNung02353 Brassica carinata HOM05D003739 ORTHO05D003996 2.9e-22 111.7 247 36.4
FAN24G2517 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.9e-22 111.7 799 24.5
arahy.Tifrunner.gnm1.ann1.TF9NF6 Arachis hypogaea HOM05D003739 ORTHO05D003996 4.9e-22 110.9 780 27.2
unitig_46.g18632 Utricularia gibba HOM05D003739 ORTHO05D003996 6.5e-22 110.5 410 29.5
THA.LOC104800691 Tarenaya hassleriana HOM05D003739 ORTHO05D003996 8.4e-22 110.2 744 23.9
BcaB03g12246 Brassica carinata HOM05D003739 ORTHO05D003996 4.2e-21 107.8 541 27.4
Phvul.002G039700 Phaseolus vulgaris HOM05D003739 ORTHO05D003996 5.5e-21 107.5 766 24.8
Psat7g051160 Pisum sativum HOM05D003739 ORTHO05D003996 5.5e-21 107.5 234 34.6
FAN15G1163 Fragaria x ananassa HOM05D003739 ORTHO05D003996 7.1e-21 107.1 808 24.4
Eucgr.A01623 Eucalyptus grandis HOM05D003739 ORTHO05D003996 9.3e-21 106.7 272 34.2
PSO541G6540 Papaver somniferum HOM05D003739 ORTHO05D003996 1.2e-20 106.3 437 29.3
SEGI_13436 Sequoiadendron giganteum HOM05D003739 ORTHO05D003996 1.2e-20 106.3 141 44.0
AT4G39160 Arabidopsis thaliana HOM05D003739 ORTHO05D003996 4.6e-20 104.4 490 29.2
BraA06t27734Z Brassica rapa HOM05D003739 ORTHO05D003996 6.0e-20 104.0 291 34.4
Medtr8g091830 Medicago truncatula HOM05D003739 ORTHO05D003996 1.0e-19 103.2 253 32.0
Actinidia05492 Actinidia chinensis HOM05D003739 ORTHO05D003996 1.3e-19 102.8 93 65.6
TPR.G2191 Trifolium pratense HOM05D003739 ORTHO05D003996 1.8e-19 102.4 192 35.9
TPR.G2246 Trifolium pratense HOM05D003739 ORTHO05D003996 1.8e-19 102.4 749 25.9
Zm00001eb249730 Zea mays HOM05D025681 ORTHO05D003996 2.3e-19 102.1 201 36.8
Medtr4g067250 Medicago truncatula HOM05D003739 ORTHO05D003996 3.9e-19 101.3 210 35.7
Zm00001eb261130 Zea mays HOM05D025681 ORTHO05D003996 3.9e-19 101.3 243 35.8
Glyma.11G010900 Glycine max HOM05D003739 ORTHO05D003996 5.1e-19 100.9 773 25.4
PSO063G1830 Papaver somniferum HOM05D003739 ORTHO05D003996 8.7e-19 100.1 283 34.3
CARHR106820 Cardamine hirsuta HOM05D003739 ORTHO05D003996 2.5e-18 98.6 311 31.8
Gohir.A09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 2.5e-18 98.6 601 27.6
Lj6g0022884 Lotus japonicus HOM05D003739 ORTHO05D003996 4.3e-18 97.8 223 35.4
C07p63340 Brassica napus HOM05D003739 ORTHO05D003996 7.4e-18 97.1 372 30.4
A06p48670 Brassica napus HOM05D003739 ORTHO05D003996 1.3e-17 96.3 566 24.9
Ca_17694_v3 Cicer arietinum L. HOM05D003739 ORTHO05D003996 6.3e-17 94.0 142 45.1
Sp3g07810 Schrenkiella parvula HOM05D003739 ORTHO05D000043 6.3e-17 94.0 516 27.5
Aa31LG6G16100 Aethionema arabicum HOM05D003739 ORTHO05D003996 1.4e-16 92.8 476 27.9
Thhalv10024751m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 1.4e-16 92.8 416 28.8
MBI16_g35489_MAGBIO Magnolia biondii HOM05D033968 ORTHO05D003996 2.4e-16 92.0 393 28.2
HanXRQChr10g0289001 Helianthus annuus HOM05D003739 ORTHO05D003996 6.9e-16 90.5 564 25.9
Carub.0007s0104 Capsella rubella HOM05D003739 ORTHO05D003996 1.2e-15 89.7 485 26.8
Aa31LG7G15010 Aethionema arabicum HOM05D003739 ORTHO05D003996 7.6e-15 87.0 407 27.0
CARHR247590 Cardamine hirsuta HOM05D003739 ORTHO05D003996 1.3e-14 86.3 488 27.3
Pp3c18_8710 Physcomitrium patens HOM05D003739 ORTHO05D003996 1.3e-14 86.3 133 38.3
ATR0564G411 Amborella trichopoda HOM05D003739 ORTHO05D003996 1.7e-14 85.9 282 29.8
A09p06800 Brassica napus HOM05D003739 ORTHO05D003996 2.5e-13 82.0 293 29.0
FvH4_2g09510 Fragaria vesca HOM05D003739 ORTHO05D003996 2.5e-13 82.0 731 23.1
AagrBONN_evm.TU.Sc2ySwM_340.755 Anthoceros agrestis HOM05D003739 ORTHO05D003996 3.2e-13 81.6 188 34.6
CARHR112440 Cardamine hirsuta HOM05D003739 ORTHO05D003996 4.2e-13 81.3 93 49.5
AagrBONN_evm.TU.Sc2ySwM_344.3723 Anthoceros agrestis HOM05D003739 ORTHO05D003996 5.5e-13 80.9 197 33.5
HPP92_028201 Vanilla planifolia HOM05D003739 ORTHO05D003996 7.2e-13 80.5 284 26.8
BraA09t36326Z Brassica rapa HOM05D003739 ORTHO05D003996 1.2e-12 79.7 289 28.4
FvH4_2g03400 Fragaria vesca HOM05D003739 ORTHO05D003996 2.1e-12 79.0 542 24.4
FAN15G1290 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.1e-12 79.0 188 32.4
Solyc02g081640.4 Solanum lycopersicum HOM05D003739 ORTHO05D003996 3.6e-12 78.2 345 28.7
Hma1.2p1_0088F.1_g045220 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 2.3e-11 75.5 62 64.5
FvH4_2g03360 Fragaria vesca HOM05D003739 ORTHO05D003996 3.9e-11 74.7 137 38.7
CBR_g31667 Chara braunii HOM05D003739 ORTHO05D003996 1.1e-10 73.2 149 32.2
Medtr8g091850 Medicago truncatula HOM05D003739 ORTHO05D003996 1.9e-10 72.4 104 41.3
Pp3c21_11880 Physcomitrium patens HOM05D003739 ORTHO05D003996 4.3e-10 71.2 193 30.6
BolC9t53626H Brassica oleracea HOM05D003739 ORTHO05D003996 9.7e-10 70.1 483 25.7
Glyma.20G185167 Glycine max HOM05D003739 ORTHO05D003996 1.3e-09 69.7 173 31.2
FAN24G0708 Fragaria x ananassa HOM05D003739 ORTHO05D003996 1.6e-09 69.3 511 26.0
MCO01G601 Micromonas commoda HOM05D003739 ORTHO05D003996 1.6e-09 69.3 146 32.2
BcaC04g23559 Brassica carinata HOM05D003739 ORTHO05D003996 2.2e-09 68.9 483 25.5
C09p07090 Brassica napus HOM05D003739 ORTHO05D003996 2.8e-09 68.6 488 26.0
FAN24G0282 Fragaria x ananassa HOM05D003739 ORTHO05D003996 3.7e-09 68.2 131 38.2
Glyma.10G205233 Glycine max HOM05D003739 ORTHO05D003996 3.7e-09 68.2 244 29.1
Lj8A306T63 Lonicera japonica HOM05D003739 ORTHO05D003996 4.8e-09 67.8 95 52.6
RcHm_v2.0_Chr6g0265821 Rosa chinensis HOM05D003739 ORTHO05D003996 1.8e-08 65.9 621 24.0
AagrBONN_evm.TU.Sc2ySwM_368.1462 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.1e-08 65.1 250 26.4
Mapoly0023s0090 Marchantia polymorpha HOM05D003739 ORTHO05D003996 1.5e-07 62.8 330 26.4
Dinv13445 Davidia involucrata HOM05D003739 ORTHO05D003996 2.6e-07 62.0 670 20.7
AagrBONN_evm.TU.Sc2ySwM_344.4525 Anthoceros agrestis HOM05D003739 ORTHO05D003996 7.7e-07 60.5 297 25.6
MELO3C005063.2 Cucumis melo HOM05D003739 ORTHO05D003996 1.0e-06 60.1 61 50.8
CDE02G4347 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 1.7e-06 59.3 53 54.7
Manes.04G075172 Manihot esculenta HOM05D003739 ORTHO05D003996 2.9e-06 58.5 49 59.2


User provided reference genes

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