Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15367 Vaccinium macrocarpon HOM05D000585 ORTHO05D003019 4.4e-83 312.0 263 100.0
Rhsim02G0028400 Rhododendron simsii HOM05D000585 ORTHO05D003019 1.4e-44 184.1 239 56.1
Dinv14037 Davidia involucrata HOM05D000585 ORTHO05D003019 9.9e-35 151.4 230 53.5
TWI73G1076 Tripterygium wilfordii HOM05D000585 ORTHO05D003019 6.4e-34 148.7 228 46.1
Cc03_g04190 Coffea canephora HOM05D000585 ORTHO05D003019 1.4e-33 147.5 230 51.7
TWI09G0946 Tripterygium wilfordii HOM05D000585 ORTHO05D003019 5.4e-33 145.6 228 48.2
QL06p001313 Quercus lobata HOM05D000585 ORTHO05D003019 7.1e-33 145.2 229 49.8
Haze_11226 Corylus avellana HOM05D000585 ORTHO05D003019 9.2e-33 144.8 227 48.9
Cfa008456 Carpinus fangiana HOM05D000585 ORTHO05D003019 1.2e-32 144.4 230 49.6
Duzib052G0772 Durio zibethinus HOM05D000585 ORTHO05D003019 4.6e-32 142.5 229 45.9
Thecc.04G237400 Theobroma cacao HOM05D000585 ORTHO05D003019 6.0e-32 142.1 229 51.5
GSVIVG01018029001 Vitis vinifera HOM05D000585 ORTHO05D003019 7.8e-32 141.7 223 54.7
TAR362G0507 Trochodendron aralioides HOM05D000585 ORTHO05D003019 1.7e-31 140.6 233 54.9
PSO210G2806 Papaver somniferum HOM05D000585 ORTHO05D003019 3.6e-29 132.9 240 42.5
CiPaw.01G196600 Carya illinoinensis HOM05D000585 ORTHO05D003019 4.7e-29 132.5 231 53.2
PSO170G4407 Papaver somniferum HOM05D000585 ORTHO05D003019 1.4e-28 131.0 240 45.8
Duzib212G0580 Durio zibethinus HOM05D000585 ORTHO05D003019 4.0e-28 129.4 229 48.0
CANSAT78G1820 Cannabis sativa HOM05D000585 ORTHO05D003019 5.2e-28 129.0 233 48.5
FvH4_4g01000 Fragaria vesca HOM05D000585 ORTHO05D003019 5.2e-28 129.0 228 45.6
Sopen09g031420 Solanum pennellii HOM05D000585 ORTHO05D003019 5.2e-28 129.0 230 48.3
FAN12G2946 Fragaria x ananassa HOM05D000585 ORTHO05D003019 6.9e-28 128.6 228 45.6
FAN22G2234 Fragaria x ananassa HOM05D000585 ORTHO05D003019 1.2e-27 127.9 229 45.9
COL.COLO4_21550 Corchorus olitorius HOM05D000585 ORTHO05D003019 1.5e-27 127.5 234 46.2
Ciclev10004919m.g Citrus clementina HOM05D000585 ORTHO05D003019 4.4e-27 125.9 231 49.8
DCAR_030682 Daucus carota HOM05D000585 ORTHO05D003019 9.9e-27 124.8 229 44.1
FAN17G1106 Fragaria x ananassa HOM05D000585 ORTHO05D003019 9.9e-27 124.8 229 48.5
TAR365G0441 Trochodendron aralioides HOM05D000585 ORTHO05D003019 2.2e-26 123.6 231 51.1
Solyc09g082560.4 Solanum lycopersicum HOM05D000585 ORTHO05D003019 2.9e-26 123.2 230 51.7
Oeu008863.2 Olea europaea HOM05D000585 ORTHO05D003019 8.4e-26 121.7 221 51.1
Manes.15G032200 Manihot esculenta HOM05D000585 ORTHO05D003019 1.4e-25 120.9 232 45.7
MD16G1198400 Malus domestica HOM05D000585 ORTHO05D003019 1.9e-25 120.6 229 45.4
Potri.010G082600 Populus trichocarpa HOM05D000585 ORTHO05D003019 1.9e-25 120.6 229 40.6
Eucgr.B00932 Eucalyptus grandis HOM05D000585 ORTHO05D003019 3.2e-25 119.8 229 46.7
Eucgr.B01029 Eucalyptus grandis HOM05D000585 ORTHO05D003019 3.2e-25 119.8 229 46.7
Nitab4.5_0005470g0010 Nicotiana tabacum HOM05D000585 ORTHO05D003019 4.2e-25 119.4 230 53.9
Sabra10G0060500 Salix brachista HOM05D000585 ORTHO05D003019 5.4e-25 119.0 229 46.3
Sabra08G0119300 Salix brachista HOM05D000585 ORTHO05D003019 7.1e-25 118.6 230 39.6
Atru.chr4.2401 Acer truncatum HOM05D000585 ORTHO05D003019 9.3e-25 118.2 237 51.1
CSS0004802 Camellia sinensis var. sinensis HOM05D000585 ORTHO05D003019 9.3e-25 118.2 89 74.2
RcHm_v2.0_Chr4g0387551 Rosa chinensis HOM05D000585 ORTHO05D003019 1.2e-24 117.9 229 46.7
TAR636G3099 Trochodendron aralioides HOM05D000585 ORTHO05D003019 3.5e-24 116.3 231 45.9
Manes.03G173900 Manihot esculenta HOM05D000585 ORTHO05D003019 4.6e-24 115.9 227 52.9
PGR142G1588 Punica granatum HOM05D000585 ORTHO05D003019 7.8e-24 115.2 228 43.9
Potri.008G156700 Populus trichocarpa HOM05D000585 ORTHO05D003019 1.7e-23 114.0 230 46.1
Atru.chr4.2377 Acer truncatum HOM05D000585 ORTHO05D003019 2.3e-23 113.6 237 50.2
Oeu053307.1 Olea europaea HOM05D000585 ORTHO05D003019 2.3e-23 113.6 227 49.3
Nn6g34148 Nelumbo nucifera HOM05D000585 ORTHO05D003019 1.1e-22 111.3 230 48.7
Lj3A729T49 Lonicera japonica HOM05D000585 ORTHO05D003019 1.5e-22 110.9 231 45.9
arahy.Tifrunner.gnm1.ann1.F73KQI Arachis hypogaea HOM05D000585 ORTHO05D003019 2.5e-22 110.2 229 42.8
arahy.Tifrunner.gnm1.ann1.MLEZ7Y Arachis hypogaea HOM05D000585 ORTHO05D003019 5.6e-22 109.0 229 42.4
Actinidia18531 Actinidia chinensis HOM05D000585 ORTHO05D003019 7.3e-22 108.6 232 44.8
Peaxi162Scf00316g01115 Petunia axillaris HOM05D000585 ORTHO05D003019 2.1e-21 107.1 89 69.7
ClCG05G004910 Citrullus lanatus HOM05D000585 ORTHO05D003019 2.8e-21 106.7 227 43.2
VMungo0720G1515 Vigna mungo HOM05D000585 ORTHO05D003019 2.8e-21 106.7 229 45.0
Nitab4.5_0000085g0220 Nicotiana tabacum HOM05D000585 ORTHO05D003019 3.6e-21 106.3 230 50.9
Ca_10859_v3 Cicer arietinum L. HOM05D000585 ORTHO05D003019 6.2e-21 105.5 226 43.8
Glyma.10G245000 Glycine max HOM05D000585 ORTHO05D003019 6.2e-21 105.5 232 42.2
MBI11_g35088_MAGBIO Magnolia biondii HOM05D000585 ORTHO05D003019 6.2e-21 105.5 222 45.9
Aqoxy5G00416 Aquilegia oxysepala HOM05D000585 ORTHO05D003019 8.1e-21 105.1 229 35.8
SalBow2G3221 Salvia bowleyana HOM05D000585 ORTHO05D003019 8.1e-21 105.1 228 43.0
Gohir.A09G218500 Gossypium hirsutum HOM05D000585 ORTHO05D003019 1.4e-20 104.4 236 33.5
TPR.G26099 Trifolium pratense HOM05D000585 ORTHO05D003019 1.4e-20 104.4 228 41.7
CsaV3_3G012950 Cucumis sativus L. HOM05D000585 ORTHO05D003019 2.4e-20 103.6 227 43.2
MBI11_g04238_MAGBIO Magnolia biondii HOM05D000585 ORTHO05D003019 4.0e-20 102.8 223 45.3
MSTRG.4056 Avicennia marina HOM05D000585 ORTHO05D003019 5.3e-20 102.4 233 51.1
Medtr1g103070 Medicago truncatula HOM05D000585 ORTHO05D003019 6.9e-20 102.1 233 46.8
CAN.G1402.14 Capsicum annuum HOM05D000585 ORTHO05D003019 9.0e-20 101.7 89 67.4
Aqoxy2G03447 Aquilegia oxysepala HOM05D000585 ORTHO05D003019 1.5e-19 100.9 227 45.4
Lalb_Chr03g0037411 Lupinus albus HOM05D000585 ORTHO05D003019 3.4e-19 99.8 86 66.3
Actinidia08468 Actinidia chinensis HOM05D000585 ORTHO05D003019 4.5e-19 99.4 89 68.5
Gohir.D09G220820 Gossypium hirsutum HOM05D000585 ORTHO05D003019 5.8e-19 99.0 238 33.2
MD13G1198300 Malus domestica HOM05D000585 ORTHO05D003019 9.9e-19 98.2 224 42.4
Gorai.006G241800 Gossypium raimondii HOM05D000585 ORTHO05D003019 3.8e-18 96.3 246 34.1
Lj5g0007146 Lotus japonicus HOM05D000585 ORTHO05D003019 6.4e-18 95.5 229 45.0
Dinv44569 Davidia involucrata HOM05D000585 ORTHO05D003019 8.4e-18 95.1 74 71.6
Psat6g205440 Pisum sativum HOM05D000585 ORTHO05D003019 1.1e-17 94.7 234 42.3
Prupe.1G020000 Prunus persica HOM05D000585 ORTHO05D003019 1.4e-17 94.4 232 44.0
MSTRG.9956 Avicennia marina HOM05D000585 ORTHO05D003019 1.9e-17 94.0 228 35.1
Migut.G00377 Erythranthe guttata HOM05D000585 ORTHO05D003019 3.2e-17 93.2 91 60.4
Medtr1g041430 Medicago truncatula HOM05D000585 ORTHO05D003019 4.2e-17 92.8 224 34.4
Psat6g104080 Pisum sativum HOM05D000585 ORTHO05D003019 7.1e-17 92.0 224 35.7
HPP92_007954 Vanilla planifolia HOM05D000585 ORTHO05D003019 9.3e-17 91.7 231 46.8
CSS0013848 Camellia sinensis var. sinensis HOM05D000585 ORTHO05D003019 3.5e-16 89.7 83 66.3
TPR.G25172 Trifolium pratense HOM05D000585 ORTHO05D003019 3.5e-16 89.7 225 34.2
ATR0665G458 Amborella trichopoda HOM05D000585 ORTHO05D003019 6.0e-16 89.0 91 62.6
Ca_12152_v3 Cicer arietinum L. HOM05D000585 ORTHO05D003019 6.0e-16 89.0 227 34.8
arahy.Tifrunner.gnm1.ann1.52TGP1 Arachis hypogaea HOM05D000585 ORTHO05D003019 3.0e-15 86.7 224 40.2
arahy.Tifrunner.gnm1.ann1.D45XKE Arachis hypogaea HOM05D000585 ORTHO05D003019 3.0e-15 86.7 224 40.2
Cpa.g.sc44.113 Carica papaya HOM05D000585 ORTHO05D003019 1.5e-14 84.3 199 41.7
Phvul.007G060900 Phaseolus vulgaris HOM05D000585 ORTHO05D003019 1.9e-14 84.0 228 44.7
MELO3C006504.2 Cucumis melo HOM05D000585 ORTHO05D003019 2.5e-14 83.6 227 41.0
Sed0022543 Sechium edule HOM05D000585 ORTHO05D003019 2.5e-14 83.6 88 56.8
Rhsim04G0198800 Rhododendron simsii HOM05D000585 ORTHO05D003019 2.8e-13 80.1 87 54.0
PSO832G2375 Papaver somniferum HOM05D000585 ORTHO05D003019 4.8e-13 79.3 244 39.3
Glyma.20G149600 Glycine max HOM05D000585 ORTHO05D003019 1.1e-12 78.2 87 54.0
unitig_748.g7304 Utricularia gibba HOM05D000585 ORTHO05D003019 1.4e-12 77.8 93 57.0
CDE06G1490 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 6.9e-12 75.5 223 46.2
Lalb_Chr02g0140691 Lupinus albus HOM05D000585 ORTHO05D003019 2.0e-11 73.9 83 54.2
CDE07G1410 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 2.6e-11 73.6 225 45.3
PGR004G0742 Punica granatum HOM05D000585 ORTHO05D003019 3.4e-11 73.2 221 40.7
Glyma.10G003700 Glycine max HOM05D000585 ORTHO05D003019 4.5e-11 72.8 86 52.3
EL10Ac3g06460 Beta vulgaris HOM05D000585 ORTHO05D003019 7.6e-11 72.0 88 51.1
PSO210G6900 Papaver somniferum HOM05D000585 ORTHO05D003019 1.3e-10 71.2 244 32.8
VMungo0720G0766 Vigna mungo HOM05D000585 ORTHO05D003019 1.3e-10 71.2 218 31.2
unitig_748.g8331 Utricularia gibba HOM05D000585 ORTHO05D003019 1.7e-10 70.9 89 53.9
MSTRG.21871 Avicennia marina HOM05D000585 ORTHO05D003019 3.8e-10 69.7 232 37.9
AUR62034701 Chenopodium quinoa HOM05D000585 ORTHO05D003019 4.9e-10 69.3 88 48.9
THA.LOC104822514 Tarenaya hassleriana HOM05D000585 ORTHO05D003019 4.9e-10 69.3 90 50.0
Ah.01g018370 Amaranthus hybridus HOM05D000585 ORTHO05D003019 6.4e-10 68.9 89 50.6
Hund12091 Selenicereus undatus HOM05D000585 ORTHO05D003019 8.4e-10 68.6 89 53.9
Glyma.02G004600 Glycine max HOM05D000585 ORTHO05D003019 1.9e-09 67.4 219 31.5
CsaV3_2G013480 Cucumis sativus L. HOM05D000585 ORTHO05D003019 2.4e-09 67.0 87 51.7
MELO3C014290.2 Cucumis melo HOM05D000585 ORTHO05D003019 3.2e-09 66.6 87 52.9
Phvul.007G277500 Phaseolus vulgaris HOM05D000585 ORTHO05D003019 5.5e-09 65.9 219 29.7
Rhsim04G0198700 Rhododendron simsii HOM05D000585 ORTHO05D003019 9.3e-09 65.1 87 47.1
BolC8t48241H Brassica oleracea HOM05D000585 ORTHO05D003019 3.5e-08 63.2 212 37.3
Sed0026798 Sechium edule HOM05D000585 ORTHO05D003019 3.5e-08 63.2 87 48.3
BcaC07g37850 Brassica carinata HOM05D000585 ORTHO05D003019 6.0e-08 62.4 212 37.3
Lalb_Chr01g0020931 Lupinus albus HOM05D000585 ORTHO05D003019 7.9e-08 62.0 87 51.7
vmacro08363 Vaccinium macrocarpon HOM05D000585 ORTHO05D003019 7.9e-08 62.0 86 46.5
PGSC0003DMG400006444 Solanum tuberosum HOM05D000585 ORTHO05D003019 1.0e-07 61.6 64 56.2
ClCG06G006420 Citrullus lanatus HOM05D000585 ORTHO05D003019 2.3e-07 60.5 87 48.3
HPP92_007929 Vanilla planifolia HOM05D000585 ORTHO05D003019 6.7e-07 58.9 81 48.1
Sed0022726 Sechium edule HOM05D000585 ORTHO05D003019 8.7e-07 58.5 87 47.1
HanXRQChr05g0143221 Helianthus annuus HOM05D000585 ORTHO05D003019 1.1e-06 58.2 221 31.7
Lsat_1_v5_gn_8_60501 Lactuca sativa HOM05D000585 ORTHO05D003019 1.5e-06 57.8 229 30.6
Zm00001eb050910 Zea mays HOM05D000585 ORTHO05D003019 1.5e-06 57.8 224 34.4
AUR62043724 Chenopodium quinoa HOM05D000585 ORTHO05D003019 1.9e-06 57.4 88 45.5
Sp7g12880 Schrenkiella parvula HOM05D000585 ORTHO05D003019 2.5e-06 57.0 213 35.2
CDE10G0737 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 7.4e-06 55.5 91 46.2
DCAR_027238 Daucus carota HOM05D000585 ORTHO05D003019 7.4e-06 55.5 87 44.8
Thhalv10025526m.g Eutrema salsugineum HOM05D000585 ORTHO05D003019 7.4e-06 55.5 73 52.1
THA.LOC104803054 Tarenaya hassleriana HOM05D000585 ORTHO05D003019 7.4e-06 55.5 75 45.3


User provided reference genes

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