Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 3.2e-215 751.5 384 100.0
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 1.1e-191 673.3 376 91.8
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 3.2e-167 592.0 384 80.2
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 1.8e-157 559.7 383 76.0
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 1.5e-148 530.0 388 70.9
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 4.8e-147 525.0 388 70.4
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 8.2e-147 524.2 388 70.4
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 3.1e-146 522.3 387 70.3
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 3.6e-142 508.8 372 69.9
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 5.1e-141 505.0 364 70.1
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 5.7e-140 501.5 368 69.3
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 1.7e-139 500.0 344 73.8
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 2.2e-139 499.6 358 71.2
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 2.2e-139 499.6 387 67.4
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 2.2e-139 499.6 376 69.7
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 6.3e-139 498.0 368 70.1
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 1.1e-138 497.3 332 74.4
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 9.1e-138 494.2 368 70.4
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 1.2e-137 493.8 361 70.6
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 2.0e-137 493.0 354 70.1
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 1.4e-135 486.9 342 71.3
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 1.4e-135 486.9 362 71.0
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 2.5e-135 486.1 331 73.7
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 4.2e-135 485.3 320 75.9
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 4.2e-135 485.3 376 66.0
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 7.2e-135 484.6 388 68.3
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 2.1e-134 483.0 348 73.6
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 2.1e-134 483.0 347 73.2
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 7.9e-134 481.1 338 71.9
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 7.9e-134 481.1 369 67.2
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 1.4e-133 480.3 376 67.6
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 2.3e-133 479.6 329 72.9
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 3.0e-133 479.2 375 66.9
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 3.9e-133 478.8 344 70.9
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 5.1e-133 478.4 312 76.3
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 8.8e-133 477.6 367 67.0
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 1.1e-132 477.2 382 66.8
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 1.5e-132 476.9 339 70.2
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 2.0e-132 476.5 377 66.0
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 2.6e-132 476.1 319 74.0
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 4.4e-132 475.3 322 72.7
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 5.7e-132 474.9 378 65.1
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 9.7e-132 474.2 344 69.8
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 1.3e-131 473.8 375 65.6
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 1.7e-131 473.4 394 63.5
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 2.6e-129 466.1 334 70.4
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 4.5e-129 465.3 391 65.7
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 7.7e-129 464.5 423 60.5
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 1.3e-128 463.8 324 71.0
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 1.3e-128 463.8 372 65.3
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 1.7e-128 463.4 317 72.6
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 1.7e-128 463.4 328 70.4
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 2.2e-128 463.0 386 62.7
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 3.8e-128 462.2 394 62.2
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 5.0e-128 461.8 389 64.0
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 8.5e-128 461.1 347 67.7
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 1.1e-127 460.7 389 63.5
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 5.5e-127 458.4 334 68.3
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 1.2e-126 457.2 323 70.0
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 3.0e-125 452.6 334 68.0
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 7.5e-124 448.0 369 64.8
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 2.2e-123 446.4 328 68.6
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 2.8e-123 446.0 406 60.3
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 1.8e-122 443.4 327 68.5
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 7.0e-122 441.4 353 66.9
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 2.7e-121 439.5 344 65.1
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 4.5e-121 438.7 329 67.5
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 1.0e-120 437.6 304 73.0
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 1.0e-120 437.6 325 66.8
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 1.3e-120 437.2 328 67.1
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 1.3e-120 437.2 327 67.6
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 1.5e-119 433.7 329 67.2
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 1.9e-119 433.3 329 66.9
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 3.2e-119 432.6 282 78.4
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 4.2e-119 432.2 329 67.2
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 5.5e-119 431.8 328 67.4
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 5.5e-119 431.8 328 67.4
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 9.4e-119 431.0 301 73.4
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 4.0e-117 425.6 377 60.2
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 1.2e-116 424.1 382 60.5
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 2.0e-116 423.3 329 66.3
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 4.4e-116 422.2 329 66.0
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 2.2e-115 419.9 329 68.1
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 5.0e-112 408.7 329 64.7
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 9.5e-111 404.4 328 60.4
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 2.7e-110 402.9 251 82.5
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 2.7e-110 402.9 328 64.3
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 1.8e-109 400.2 256 78.1
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 1.5e-108 397.1 337 62.3
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 5.0e-104 382.1 269 70.6
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.4e-101 374.0 373 57.1
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 2.0e-100 370.2 316 61.7
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 5.7e-100 368.6 317 61.8
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 1.1e-98 364.4 230 80.0
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 2.4e-98 363.2 305 63.6
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 5.4e-98 362.1 325 56.3
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 2.7e-97 359.8 329 62.3
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 1.6e-94 350.5 302 57.3
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 9.2e-90 334.7 310 56.1
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 1.6e-89 334.0 310 58.1
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 2.7e-89 333.2 319 52.0
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 3.7e-83 312.8 197 79.7
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.9e-82 310.5 313 49.2
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.1e-77 294.7 264 61.7
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 7.6e-76 288.5 250 61.2
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 4.9e-75 285.8 227 67.8
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 3.5e-73 279.6 188 75.5
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 1.9e-71 273.9 178 77.5
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 1.3e-67 261.2 247 58.3
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 1.9e-66 257.3 159 80.5
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 8.7e-64 248.4 200 68.0
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 1.8e-61 240.7 344 47.7
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 8.7e-56 221.9 276 41.7
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 9.6e-47 191.8 268 41.0
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 1.5e-44 184.5 137 67.2
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 1.1e-42 178.3 280 35.4
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 1.2e-33 148.3 129 62.8
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 7.9e-33 145.6 105 70.5
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 1.0e-32 145.2 222 45.0
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 2.8e-30 137.1 241 40.2
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 2.2e-27 127.5 84 81.0
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 9.4e-26 122.1 84 76.2
Oeu037664.1 Olea europaea HOM05D006658 ORTHO05D008515 4.2e-18 96.7 69 59.4
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 5.3e-13 79.7 62 59.7
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 8.0e-09 65.9 46 73.9


User provided reference genes

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