Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15262 Vaccinium macrocarpon HOM05D002928 ORTHO05D426645 6.9e-54 213.8 112 100.0
vmacro22590 Vaccinium macrocarpon HOM05D002928 ORTHO05D427030 1.1e-24 116.7 99 73.7
COL.COLO4_22866 Corchorus olitorius HOM05D002928 ORTHO05D003794 2.2e-20 102.4 87 73.6
Eucgr.C02497 Eucalyptus grandis HOM05D002928 ORTHO05D003794 2.9e-20 102.1 87 72.4
Eucgr.C02536 Eucalyptus grandis HOM05D002928 ORTHO05D003794 2.9e-20 102.1 87 72.4
Actinidia38670 Actinidia chinensis HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
MELO3C004130.2 Cucumis melo HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
CsaV3_2G007560 Cucumis sativus L. HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
Dinv42848 Davidia involucrata HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
Dinv43252 Davidia involucrata HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
Rhsim01G0028300 Rhododendron simsii HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
Sabra18G0090300 Salix brachista HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
Thecc.09G029000 Theobroma cacao HOM05D002928 ORTHO05D003794 5.0e-20 101.3 87 72.4
Potri.018G105900 Populus trichocarpa HOM05D002928 ORTHO05D003794 6.5e-20 100.9 85 74.1
Sabra06G0139500 Salix brachista HOM05D002928 ORTHO05D003794 6.5e-20 100.9 87 71.3
GSVIVG01023620001 Vitis vinifera HOM05D002928 ORTHO05D003794 6.5e-20 100.9 87 71.3
Gohir.A07G027100 Gossypium hirsutum HOM05D002928 ORTHO05D003794 8.5e-20 100.5 87 71.3
CSS0014470 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 1.1e-19 100.1 87 71.3
Ca_21132_v3 Cicer arietinum L. HOM05D002928 ORTHO05D003794 1.1e-19 100.1 87 71.3
Manes.06G034500 Manihot esculenta HOM05D002928 ORTHO05D003794 1.1e-19 100.1 87 71.3
Manes.14G144400 Manihot esculenta HOM05D002928 ORTHO05D003794 1.1e-19 100.1 87 71.3
Nitab4.5_0002891g0050 Nicotiana tabacum HOM05D002928 ORTHO05D003794 1.1e-19 100.1 87 71.3
Nitab4.5_0008875g0030 Nicotiana tabacum HOM05D002928 ORTHO05D003794 1.1e-19 100.1 87 71.3
ClCG02G014440 Citrullus lanatus HOM05D002928 ORTHO05D003794 1.5e-19 99.8 87 71.3
COL.COLO4_18815 Corchorus olitorius HOM05D002928 ORTHO05D003794 1.5e-19 99.8 87 71.3
Duzib187G0297 Durio zibethinus HOM05D002928 ORTHO05D003794 1.5e-19 99.8 87 72.4
Potri.006G183600 Populus trichocarpa HOM05D002928 ORTHO05D003794 1.5e-19 99.8 85 72.9
PGR102G2877 Punica granatum HOM05D002928 ORTHO05D003794 1.5e-19 99.8 87 70.1
QL02p068861 Quercus lobata HOM05D002928 ORTHO05D003794 1.5e-19 99.8 87 70.1
vmacro16797 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 1.5e-19 99.8 87 71.3
Cc06_g14860 Coffea canephora HOM05D002928 ORTHO05D003794 1.9e-19 99.4 88 69.3
Gohir.D07G031100 Gossypium hirsutum HOM05D002928 ORTHO05D003794 1.9e-19 99.4 87 70.1
Gorai.001G032400 Gossypium raimondii HOM05D002928 ORTHO05D003794 1.9e-19 99.4 87 70.1
CSS0004317 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 2.5e-19 99.0 87 71.3
CiPaw.15G167900 Carya illinoinensis HOM05D002928 ORTHO05D003794 2.5e-19 99.0 87 70.1
Medtr4g130770 Medicago truncatula HOM05D002928 ORTHO05D003794 2.5e-19 99.0 87 70.1
Oeu052208.1 Olea europaea HOM05D002928 ORTHO05D003794 2.5e-19 99.0 103 63.1
Oeu054272.1 Olea europaea HOM05D002928 ORTHO05D003794 2.5e-19 99.0 87 70.1
CAN.G160.55 Capsicum annuum HOM05D002928 ORTHO05D003794 3.2e-19 98.6 87 70.1
Cfa020818 Carpinus fangiana HOM05D002928 ORTHO05D003794 3.2e-19 98.6 87 69.0
Haze_19196 Corylus avellana HOM05D002928 ORTHO05D003794 3.2e-19 98.6 87 69.0
Lj6g0013054 Lotus japonicus HOM05D002928 ORTHO05D003794 3.2e-19 98.6 85 71.8
Peaxi162Scf00062g00219 Petunia axillaris HOM05D002928 ORTHO05D003794 3.2e-19 98.6 87 70.1
SGA_v2.0_scaffold45G17027 Striga asiatica HOM05D002928 ORTHO05D003794 3.2e-19 98.6 87 70.1
TPR.G30712 Trifolium pratense HOM05D002928 ORTHO05D003794 3.2e-19 98.6 87 70.1
Actinidia24380 Actinidia chinensis HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 69.0
Dinv41370 Davidia involucrata HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 70.1
FvH4_1g00830 Fragaria vesca HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 69.0
FAN26G1266 Fragaria x ananassa HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 69.0
FAN28G2936 Fragaria x ananassa HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 69.0
HanXRQChr05g0143981 Helianthus annuus HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 70.1
Lj4g0021489 Lotus japonicus HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 70.1
Phvul.009G194700 Phaseolus vulgaris HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 70.1
QL02p093370 Quercus lobata HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 69.0
TAR383G0178 Trochodendron aralioides HOM05D002928 ORTHO05D003794 4.2e-19 98.2 87 70.1
CSS0013967 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 5.5e-19 97.8 87 70.1
CSS0027124 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 5.5e-19 97.8 87 70.1
Ciclev10007753m.g Citrus clementina HOM05D002928 ORTHO05D003794 5.5e-19 97.8 87 70.1
Glyma.06G220500 Glycine max HOM05D002928 ORTHO05D003794 5.5e-19 97.8 87 69.0
Lj1C1017T2 Lonicera japonica HOM05D002928 ORTHO05D003794 5.5e-19 97.8 87 69.0
Lj1C1019G10 Lonicera japonica HOM05D002928 ORTHO05D003794 5.5e-19 97.8 87 69.0
VMungo1309G0506 Vigna mungo HOM05D002928 ORTHO05D003794 5.5e-19 97.8 87 69.0
Atru.chr7.18 Acer truncatum HOM05D002928 ORTHO05D003794 7.2e-19 97.4 87 70.1
SalBow1G3419 Salvia bowleyana HOM05D002928 ORTHO05D003794 7.2e-19 97.4 87 69.0
Solyc12g009990.2 Solanum lycopersicum HOM05D002928 ORTHO05D003794 7.2e-19 97.4 87 69.0
Sopen12g004860 Solanum pennellii HOM05D002928 ORTHO05D003794 7.2e-19 97.4 87 69.0
CAN.G551.45 Capsicum annuum HOM05D002928 ORTHO05D003794 9.4e-19 97.1 87 67.8
ECA248G1996 Erigeron canadensis HOM05D002928 ORTHO05D003794 9.4e-19 97.1 87 69.0
FAN24G1218 Fragaria x ananassa HOM05D002928 ORTHO05D003794 9.4e-19 97.1 87 67.8
Nitab4.5_0001571g0050 Nicotiana tabacum HOM05D002928 ORTHO05D003794 9.4e-19 97.1 87 69.0
Peaxi162Scf00643g00413 Petunia axillaris HOM05D002928 ORTHO05D003794 9.4e-19 97.1 86 69.8
Prupe.7G264100 Prunus persica HOM05D002928 ORTHO05D003794 9.4e-19 97.1 85 70.6
Sed0012591 Sechium edule HOM05D002928 ORTHO05D003794 9.4e-19 97.1 87 69.0
CARHR238470 Cardamine hirsuta HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 69.0
Cpa.g.sc46.162 Carica papaya HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 69.0
Glyma.17G073300 Glycine max HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 69.0
HanXRQChr06g0180611 Helianthus annuus HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 69.0
Lalb_Chr13g0300841 Lupinus albus HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 67.8
Nn2g12407 Nelumbo nucifera HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 69.0
Nitab4.5_0005653g0030 Nicotiana tabacum HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 69.0
Psat0s2403g0040 Pisum sativum HOM05D002928 ORTHO05D003794 1.2e-18 96.7 87 69.0
MSTRG.19654 Avicennia marina HOM05D002928 ORTHO05D003794 1.6e-18 96.3 87 67.8
MD02G1006600 Malus domestica HOM05D002928 ORTHO05D003794 1.6e-18 96.3 87 67.8
MD15G1151700 Malus domestica HOM05D002928 ORTHO05D003794 1.6e-18 96.3 87 67.8
Sed0017586 Sechium edule HOM05D002928 ORTHO05D003794 1.6e-18 96.3 87 69.0
PGSC0003DMG400007905 Solanum tuberosum HOM05D002928 ORTHO05D003794 1.6e-18 96.3 87 67.8
RcHm_v2.0_Chr2g0085561 Rosa chinensis HOM05D002928 ORTHO05D003794 2.1e-18 95.9 87 67.8
THA.LOC104819994 Tarenaya hassleriana HOM05D002928 ORTHO05D003794 2.1e-18 95.9 85 69.4
TAR625G0332 Trochodendron aralioides HOM05D002928 ORTHO05D003794 2.1e-18 95.9 85 69.4
vmacro05439 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 2.1e-18 95.9 87 69.0
Migut.J01351 Erythranthe guttata HOM05D002928 ORTHO05D003794 2.7e-18 95.5 87 65.5
FvH4_2g11040 Fragaria vesca HOM05D002928 ORTHO05D003794 2.7e-18 95.5 87 66.7
Peaxi162Scf01764g00002 Petunia axillaris HOM05D002928 ORTHO05D003794 2.7e-18 95.5 86 68.6
Phvul.003G155500 Phaseolus vulgaris HOM05D002928 ORTHO05D003794 2.7e-18 95.5 87 67.8
THA.LOC104803542 Tarenaya hassleriana HOM05D002928 ORTHO05D003794 2.7e-18 95.5 87 67.8
BcaNung00569 Brassica carinata HOM05D002928 ORTHO05D003794 3.6e-18 95.1 87 66.7
C07p58050 Brassica napus HOM05D002928 ORTHO05D003794 3.6e-18 95.1 87 66.7
BolC7t46263H Brassica oleracea HOM05D002928 ORTHO05D003794 3.6e-18 95.1 87 66.7
Gohir.D06G098500 Gossypium hirsutum HOM05D002928 ORTHO05D003794 3.6e-18 95.1 87 67.8
Gorai.010G113600 Gossypium raimondii HOM05D002928 ORTHO05D003794 3.6e-18 95.1 87 67.8
Lalb_Chr11g0072651 Lupinus albus HOM05D002928 ORTHO05D003794 3.6e-18 95.1 85 69.4
Hund04383 Selenicereus undatus HOM05D002928 ORTHO05D003794 3.6e-18 95.1 87 66.7
Aqoxy3G02300 Aquilegia oxysepala HOM05D002928 ORTHO05D003794 4.7e-18 94.7 87 66.7
BcaNung04564 Brassica carinata HOM05D002928 ORTHO05D003794 4.7e-18 94.7 87 66.7
MBI16_g24666_MAGBIO Magnolia biondii HOM05D002928 ORTHO05D003794 4.7e-18 94.7 87 67.8
Ah.03g147670 Amaranthus hybridus HOM05D002928 ORTHO05D003794 6.1e-18 94.4 87 65.5
ATR0772G178 Amborella trichopoda HOM05D002928 ORTHO05D003794 6.1e-18 94.4 85 67.1
CiPaw.16G109700 Carya illinoinensis HOM05D002928 ORTHO05D034233 6.1e-18 94.4 98 64.3
SGA_v2.0_scaffold426G51505 Striga asiatica HOM05D002928 ORTHO05D003794 6.1e-18 94.4 87 66.7
BcaC09g51851 Brassica carinata HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 65.5
BcaNung02974 Brassica carinata HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 65.5
A01p07640 Brassica napus HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 65.5
A03p60120 Brassica napus HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 65.5
BraA01t00707Z Brassica rapa HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 65.5
BraA03t15057Z Brassica rapa HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 65.5
CANSAT11G1221 Cannabis sativa HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 66.7
Sp7g28470 Schrenkiella parvula HOM05D002928 ORTHO05D003794 8.0e-18 94.0 87 65.5
Gohir.A06G098000 Gossypium hirsutum HOM05D002928 ORTHO05D003794 1.0e-17 93.6 87 66.7
Aa31LG2G19920 Aethionema arabicum HOM05D002928 ORTHO05D003794 1.4e-17 93.2 87 66.7
Aqoxy1G00970 Aquilegia oxysepala HOM05D002928 ORTHO05D003794 1.4e-17 93.2 87 65.5
Lsat_1_v5_gn_8_63581 Lactuca sativa HOM05D002928 ORTHO05D003794 1.4e-17 93.2 84 69.0
AL7G21540 Arabidopsis lyrata HOM05D002928 ORTHO05D003794 1.8e-17 92.8 87 66.7
AT4G30600 Arabidopsis thaliana HOM05D002928 ORTHO05D003794 1.8e-17 92.8 87 66.7
Duzib168G1829 Durio zibethinus HOM05D002928 ORTHO05D003794 2.3e-17 92.4 86 66.3
Nn8g39922 Nelumbo nucifera HOM05D002928 ORTHO05D003794 2.3e-17 92.4 87 66.7
HPP92_005048 Vanilla planifolia HOM05D002928 ORTHO05D003794 2.3e-17 92.4 87 63.2
HPP92_005065 Vanilla planifolia HOM05D002928 ORTHO05D003794 2.3e-17 92.4 87 63.2
VMungo1215G3047 Vigna mungo HOM05D002928 ORTHO05D003794 2.3e-17 92.4 87 65.5
ATR0115G002 Amborella trichopoda HOM05D002928 ORTHO05D003794 3.0e-17 92.0 85 65.9
SGA_v2.0_scaffold23G10013 Striga asiatica HOM05D002928 ORTHO05D003794 3.0e-17 92.0 87 65.5
Os08g0480100 Oryza sativa ssp. japonica HOM05D002928 ORTHO05D003794 4.0e-17 91.7 85 65.9
Carub.0007s0997 Capsella rubella HOM05D002928 ORTHO05D003794 5.2e-17 91.3 87 66.7
SEGI_12988 Sequoiadendron giganteum HOM05D002928 ORTHO05D003794 5.2e-17 91.3 85 64.7
EL10Ac6g15341 Beta vulgaris HOM05D002928 ORTHO05D003794 6.7e-17 90.9 87 64.4
PSO063G7436 Papaver somniferum HOM05D002928 ORTHO05D003794 6.7e-17 90.9 87 63.2
PSO384G2120 Papaver somniferum HOM05D002928 ORTHO05D003794 6.7e-17 90.9 87 63.2
PSO591G0067 Papaver somniferum HOM05D002928 ORTHO05D003794 6.7e-17 90.9 87 63.2
C01p08330 Brassica napus HOM05D002928 ORTHO05D003794 1.2e-16 90.1 87 63.2
BolC1t00819H Brassica oleracea HOM05D002928 ORTHO05D003794 1.2e-16 90.1 87 63.2
PSO339G1052 Papaver somniferum HOM05D002928 ORTHO05D003794 2.0e-16 89.4 86 62.8
Sc10g0008640 Simmondsia chinensis HOM05D002928 ORTHO05D003794 2.0e-16 89.4 87 64.4
CiPaw.16G110200 Carya illinoinensis HOM05D002928 ORTHO05D003794 2.6e-16 89.0 85 65.9
PSO210G4055 Papaver somniferum HOM05D002928 ORTHO05D003794 2.6e-16 89.0 84 63.1
PSO210G6788 Papaver somniferum HOM05D002928 ORTHO05D003794 2.6e-16 89.0 84 63.1
TWI34G1864 Tripterygium wilfordii HOM05D002928 ORTHO05D003794 2.6e-16 89.0 87 63.2
TWI32G1175 Tripterygium wilfordii HOM05D002928 ORTHO05D003794 5.7e-16 87.8 87 62.1
Actinidia23555 Actinidia chinensis HOM05D002928 ORTHO05D002632 7.5e-16 87.4 87 64.4
Thhalv10024667m.g Eutrema salsugineum HOM05D002928 ORTHO05D003794 7.5e-16 87.4 87 63.2
Zm00001eb000480 Zea mays HOM05D002928 ORTHO05D003794 7.5e-16 87.4 85 61.2
AUR62017854 Chenopodium quinoa HOM05D002928 ORTHO05D003794 1.3e-15 86.7 87 60.9
AUR62003540 Chenopodium quinoa HOM05D002928 ORTHO05D003794 1.7e-15 86.3 87 60.9
Lj1C1016G8 Lonicera japonica HOM05D002928 ORTHO05D003794 1.7e-15 86.3 99 60.6
CBR_g18888 Chara braunii HOM05D002928 ORTHO05D003794 2.2e-15 85.9 87 62.1
FAN23G2032 Fragaria x ananassa HOM05D002928 ORTHO05D003794 3.7e-15 85.1 110 54.5
Rhsim03G0257400 Rhododendron simsii HOM05D002928 ORTHO05D003794 4.8e-15 84.7 116 54.3
CDE06G1463 Ceratophyllum demersum HOM05D002928 ORTHO05D003794 1.1e-14 83.6 87 59.8
CDE03G0364 Ceratophyllum demersum HOM05D002928 ORTHO05D003794 1.4e-14 83.2 87 59.8
Pp3c19_22330 Physcomitrium patens HOM05D002928 ORTHO05D003794 1.4e-14 83.2 83 62.7
Mapoly0062s0007 Marchantia polymorpha HOM05D002928 ORTHO05D003794 1.8e-14 82.8 87 59.8
Lsat_1_v5_gn_9_62381 Lactuca sativa HOM05D002928 ORTHO05D003794 2.4e-14 82.4 83 62.7
AagrBONN_evm.TU.Sc2ySwM_344.2608 Anthoceros agrestis HOM05D002928 ORTHO05D003794 9.1e-14 80.5 86 55.8
CiPaw.16G108700 Carya illinoinensis HOM05D002928 ORTHO05D003794 1.3e-12 76.6 85 61.2
unitig_0.g516 Utricularia gibba HOM05D002928 ORTHO05D003794 2.9e-12 75.5 82 58.5
unitig_60.g25522 Utricularia gibba HOM05D002928 ORTHO05D003794 3.8e-12 75.1 82 58.5
Pp3c22_18840 Physcomitrium patens HOM05D002928 ORTHO05D003794 4.2e-11 71.6 84 57.1
CiPaw.16G109000 Carya illinoinensis HOM05D002928 ORTHO05D003794 1.2e-10 70.1 47 83.0
vmacro04675 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 8.0e-10 67.4 110 43.6
Actinidia01428 Actinidia chinensis HOM05D002928 ORTHO05D003794 3.0e-09 65.5 88 51.1
CiPaw.16G110000 Carya illinoinensis HOM05D002928 ORTHO05D003794 5.2e-09 64.7 81 56.8
MCO13G152 Micromonas commoda HOM05D002928 ORTHO05D003794 8.8e-09 63.9 88 45.5
SMO367G0463 Selaginella moellendorffii HOM05D002928 ORTHO05D003794 7.5e-08 60.8 88 44.3
Lju50E10G0 Lonicera japonica HOM05D002928 ORTHO05D034233 1.7e-07 59.7 67 61.2
MD02G1061600 Malus domestica HOM05D002928 ORTHO05D248122 6.3e-07 57.8 72 59.7
arahy.Tifrunner.gnm1.ann1.AAXI8T Arachis hypogaea HOM05D002928 ORTHO05D003794 8.3e-07 57.4 59 66.1
arahy.Tifrunner.gnm1.ann1.V0HTQD Arachis hypogaea HOM05D002928 ORTHO05D003794 8.3e-07 57.4 59 66.1
Hma1.2p1_0222F.1_g093640 Hydrangea macrophylla HOM05D002928 ORTHO05D003794 1.1e-06 57.0 60 65.0
PRCOL_00003397 Prasinoderma coloniale HOM05D002928 ORTHO05D003794 1.1e-06 57.0 81 48.1
vmacro22593 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 1.8e-06 56.2 32 84.4
Rhsim01G0028400 Rhododendron simsii HOM05D002928 ORTHO05D011390 5.4e-06 54.7 60 63.3
vmacro15259 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 5.4e-06 54.7 32 81.2


User provided reference genes

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