Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15219 Vaccinium macrocarpon HOM05D003304 ORTHO05D003762 4.3e-85 318.2 184 100.0
Rhsim02G0007700 Rhododendron simsii HOM05D003304 ORTHO05D003762 9.3e-64 247.3 190 84.7
Dinv29740 Davidia involucrata HOM05D003304 ORTHO05D003762 3.3e-45 185.7 181 64.6
SalBow2G2784 Salvia bowleyana HOM05D003304 ORTHO05D003762 1.4e-43 180.3 167 74.3
Cc03_g01680 Coffea canephora HOM05D003304 ORTHO05D003762 5.8e-42 174.9 170 65.3
MSTRG.3901 Avicennia marina HOM05D003304 ORTHO05D003762 1.9e-40 169.9 175 64.6
Nitab4.5_0000513g0170 Nicotiana tabacum HOM05D003304 ORTHO05D003762 2.5e-40 169.5 194 59.8
Oeu053986.1 Olea europaea HOM05D003304 ORTHO05D003762 2.5e-40 169.5 175 57.7
Oeu001109.1 Olea europaea HOM05D003304 ORTHO05D003762 3.2e-40 169.1 160 67.5
Actinidia14289 Actinidia chinensis HOM05D003304 ORTHO05D003762 5.5e-40 168.3 189 66.1
Peaxi162Scf00246g00127 Petunia axillaris HOM05D003304 ORTHO05D003762 7.1e-40 167.9 178 62.4
CAN.G261.4 Capsicum annuum HOM05D003304 ORTHO05D003762 2.1e-39 166.4 175 62.3
Potri.010G012000 Populus trichocarpa HOM05D003304 ORTHO05D003762 1.3e-38 163.7 166 60.8
TWI53G1575 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 2.3e-38 162.9 179 59.8
MD16G1166700 Malus domestica HOM05D003304 ORTHO05D003762 5.1e-38 161.8 161 65.2
MD13G1166900 Malus domestica HOM05D003304 ORTHO05D003762 6.7e-38 161.4 161 64.0
Manes.15G011400 Manihot esculenta HOM05D003304 ORTHO05D003762 6.7e-38 161.4 173 62.4
Sabra10G0007700 Salix brachista HOM05D003304 ORTHO05D003762 8.7e-38 161.0 155 63.2
Thecc.04G287300 Theobroma cacao HOM05D003304 ORTHO05D003762 8.7e-38 161.0 170 61.2
SalBow5G3057 Salvia bowleyana HOM05D003304 ORTHO05D003762 1.5e-37 160.2 176 62.5
DCAR_023290 Daucus carota HOM05D003304 ORTHO05D003762 2.5e-37 159.5 194 61.9
CANSAT78G0081 Cannabis sativa HOM05D003304 ORTHO05D003762 7.4e-37 157.9 200 58.0
Haze_01180 Corylus avellana HOM05D003304 ORTHO05D003762 7.4e-37 157.9 171 61.4
SGA_v2.0_scaffold67G22614 Striga asiatica HOM05D003304 ORTHO05D003762 7.4e-37 157.9 192 62.0
PGSC0003DMG400035598 Solanum tuberosum HOM05D003304 ORTHO05D003762 1.3e-36 157.1 181 58.6
QL06p009983 Quercus lobata HOM05D003304 ORTHO05D003762 1.6e-36 156.8 178 62.9
QL93p2007_0071 Quercus lobata HOM05D003304 ORTHO05D003762 1.6e-36 156.8 178 62.9
COL.COLO4_13834 Corchorus olitorius HOM05D003304 ORTHO05D003762 2.1e-36 156.4 165 66.1
Peaxi162Scf00646g00329 Petunia axillaris HOM05D003304 ORTHO05D003762 2.1e-36 156.4 170 52.4
Potri.008G220700 Populus trichocarpa HOM05D003304 ORTHO05D003762 2.1e-36 156.4 154 61.0
DCAR_027060 Daucus carota HOM05D003304 ORTHO05D003762 2.8e-36 156.0 202 51.0
Sopen01g028290 Solanum pennellii HOM05D003304 ORTHO05D003762 2.8e-36 156.0 177 59.3
TAR622G1126 Trochodendron aralioides HOM05D003304 ORTHO05D003762 3.7e-36 155.6 187 50.8
Actinidia40286 Actinidia chinensis HOM05D003304 ORTHO05D003762 4.8e-36 155.2 182 54.9
Solyc01g066640.2 Solanum lycopersicum HOM05D003304 ORTHO05D003762 4.8e-36 155.2 181 56.9
CsaV3_3G014790 Cucumis sativus L. HOM05D003304 ORTHO05D003762 6.2e-36 154.8 157 66.9
Duzib212G1014 Durio zibethinus HOM05D003304 ORTHO05D003762 6.2e-36 154.8 172 58.7
Actinidia19582 Actinidia chinensis HOM05D003304 ORTHO05D003762 8.2e-36 154.5 196 56.6
Glyma.17G027500 Glycine max HOM05D003304 ORTHO05D003762 1.4e-35 153.7 191 59.7
HanXRQChr13g0420021 Helianthus annuus HOM05D003304 ORTHO05D003762 1.4e-35 153.7 171 64.3
Oeu006408.1 Olea europaea HOM05D003304 ORTHO05D003762 2.4e-35 152.9 156 62.8
MELO3C006676.2 Cucumis melo HOM05D003304 ORTHO05D003762 3.1e-35 152.5 158 65.2
RcHm_v2.0_Chr4g0422951 Rosa chinensis HOM05D003304 ORTHO05D003762 4.1e-35 152.1 175 57.7
Rhsim04G0224500 Rhododendron simsii HOM05D003304 ORTHO05D003762 5.3e-35 151.8 164 67.7
Migut.N00085 Erythranthe guttata HOM05D003304 ORTHO05D003762 6.9e-35 151.4 183 56.8
Duzib052G0413 Durio zibethinus HOM05D003304 ORTHO05D003762 3.4e-34 149.1 167 57.5
Nitab4.5_0005362g0020 Nicotiana tabacum HOM05D003304 ORTHO05D003762 3.4e-34 149.1 164 61.6
Cpa.g.sc16.193 Carica papaya HOM05D003304 ORTHO05D003762 5.8e-34 148.3 164 56.7
Lsat_1_v5_gn_6_95300 Lactuca sativa HOM05D003304 ORTHO05D003762 7.6e-34 147.9 205 53.7
CiPaw.01G146800 Carya illinoinensis HOM05D003304 ORTHO05D003762 1.0e-33 147.5 177 52.5
HanXRQChr03g0089411 Helianthus annuus HOM05D003304 ORTHO05D003762 1.0e-33 147.5 185 53.0
Lalb_Chr07g0177821 Lupinus albus HOM05D003304 ORTHO05D003762 1.0e-33 147.5 165 60.6
SGA_v2.0_scaffold18G08346 Striga asiatica HOM05D003304 ORTHO05D003762 1.3e-33 147.1 168 59.5
Glyma.07G246500 Glycine max HOM05D003304 ORTHO05D003762 1.7e-33 146.7 193 57.0
ECA240G0321 Erigeron canadensis HOM05D003304 ORTHO05D003762 2.9e-33 146.0 180 51.1
FvH4_4g18460 Fragaria vesca HOM05D003304 ORTHO05D003762 3.8e-33 145.6 175 56.0
FAN12G0090 Fragaria x ananassa HOM05D003304 ORTHO05D003762 3.8e-33 145.6 175 56.0
Gohir.D10G171500 Gossypium hirsutum HOM05D003304 ORTHO05D003762 3.8e-33 145.6 161 63.4
Gorai.011G191600 Gossypium raimondii HOM05D003304 ORTHO05D003762 3.8e-33 145.6 161 63.4
Lj4g0014231 Lotus japonicus HOM05D003304 ORTHO05D003762 3.8e-33 145.6 162 63.6
FAN12G1565 Fragaria x ananassa HOM05D003304 ORTHO05D003762 5.0e-33 145.2 175 56.0
FAN17G2918 Fragaria x ananassa HOM05D003304 ORTHO05D003762 6.5e-33 144.8 175 56.0
ClCG06G005040 Citrullus lanatus HOM05D003304 ORTHO05D003762 8.4e-33 144.4 182 57.1
Gohir.A10G165400 Gossypium hirsutum HOM05D003304 ORTHO05D003762 1.4e-32 143.7 160 61.2
PGSC0003DMG400004631 Solanum tuberosum HOM05D003304 ORTHO05D003762 1.4e-32 143.7 169 51.5
Sed0002765 Sechium edule HOM05D003304 ORTHO05D003762 1.9e-32 143.3 182 59.3
CsaV3_6G023920 Cucumis sativus L. HOM05D003304 ORTHO05D003762 4.2e-32 142.1 184 57.6
FAN07G2181 Fragaria x ananassa HOM05D003304 ORTHO05D003762 5.5e-32 141.7 175 55.4
Hma1.2p1_0078F.1_g040430 Hydrangea macrophylla HOM05D003304 ORTHO05D003762 5.5e-32 141.7 174 52.9
EL10Ac3g06624 Beta vulgaris HOM05D003304 ORTHO05D003762 7.2e-32 141.4 186 51.1
Thhalv10004314m.g Eutrema salsugineum HOM05D003304 ORTHO05D003762 7.2e-32 141.4 163 62.0
Phvul.003G096600 Phaseolus vulgaris HOM05D003304 ORTHO05D003762 7.2e-32 141.4 184 55.4
MELO3C021319.2 Cucumis melo HOM05D003304 ORTHO05D003762 9.3e-32 141.0 184 57.1
Lalb_Chr13g0303541 Lupinus albus HOM05D003304 ORTHO05D003762 9.3e-32 141.0 166 60.2
Nitab4.5_0000570g0270 Nicotiana tabacum HOM05D003304 ORTHO05D003762 1.6e-31 140.2 186 48.9
Solyc12g099450.3 Solanum lycopersicum HOM05D003304 ORTHO05D003762 1.6e-31 140.2 171 50.9
Sopen12g034120 Solanum pennellii HOM05D003304 ORTHO05D003762 1.6e-31 140.2 171 50.9
Lj6g0014556 Lotus japonicus HOM05D003304 ORTHO05D003762 2.1e-31 139.8 186 56.5
Medtr2g436340 Medicago truncatula HOM05D003304 ORTHO05D003762 2.7e-31 139.4 155 54.2
VMungo1215G1188 Vigna mungo HOM05D003304 ORTHO05D003762 2.7e-31 139.4 167 57.5
Glyma.15G149700 Glycine max HOM05D003304 ORTHO05D003762 3.5e-31 139.0 175 51.4
Oeu016250.1 Olea europaea HOM05D003304 ORTHO05D003762 4.6e-31 138.7 155 52.3
TWI73G0854 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 4.6e-31 138.7 160 61.2
CARHR182640 Cardamine hirsuta HOM05D003304 ORTHO05D003762 6.1e-31 138.3 166 62.0
Oeu016249.1 Olea europaea HOM05D003304 ORTHO05D003762 1.0e-30 137.5 153 52.3
Sabra08G0152100 Salix brachista HOM05D003304 ORTHO05D003762 1.0e-30 137.5 171 58.5
Prupe.1G133400 Prunus persica HOM05D003304 ORTHO05D003762 1.8e-30 136.7 163 50.9
Gohir.D09G238900 Gossypium hirsutum HOM05D003304 ORTHO05D003762 3.0e-30 136.0 172 62.8
Lalb_Chr18g0051571 Lupinus albus HOM05D003304 ORTHO05D003762 3.9e-30 135.6 188 55.3
Sed0000258 Sechium edule HOM05D003304 ORTHO05D003762 5.1e-30 135.2 174 62.1
Aqoxy3G03400 Aquilegia oxysepala HOM05D003304 ORTHO05D003762 6.7e-30 134.8 201 55.2
Ca_01922_v3 Cicer arietinum L. HOM05D003304 ORTHO05D003762 6.7e-30 134.8 155 50.3
Glyma.09G043300 Glycine max HOM05D003304 ORTHO05D003762 8.7e-30 134.4 177 54.8
vmacro08170 Vaccinium macrocarpon HOM05D003304 ORTHO05D003762 8.7e-30 134.4 179 56.4
VMungo1309G2051 Vigna mungo HOM05D003304 ORTHO05D003762 8.7e-30 134.4 192 47.9
BraA02t08771Z Brassica rapa HOM05D003304 ORTHO05D003762 1.1e-29 134.0 172 59.3
BcaC03g17695 Brassica carinata HOM05D003304 ORTHO05D003762 1.5e-29 133.7 166 60.8
C02p57040 Brassica napus HOM05D003304 ORTHO05D003762 1.5e-29 133.7 166 60.8
BolC2t11774H Brassica oleracea HOM05D003304 ORTHO05D003762 1.5e-29 133.7 166 60.8
Gorai.006G261600 Gossypium raimondii HOM05D003304 ORTHO05D003762 2.5e-29 132.9 172 62.8
Phvul.009G249600 Phaseolus vulgaris HOM05D003304 ORTHO05D003762 7.4e-29 131.3 183 50.3
A02p37880 Brassica napus HOM05D003304 ORTHO05D003762 1.6e-28 130.2 168 59.5
Dinv44362 Davidia involucrata HOM05D003304 ORTHO05D003762 3.7e-28 129.0 93 76.3
Psat1g155200 Pisum sativum HOM05D003304 ORTHO05D003762 3.7e-28 129.0 163 48.5
BcaC03g17699 Brassica carinata HOM05D003304 ORTHO05D003762 4.8e-28 128.6 166 59.6
Eucgr.B01602 Eucalyptus grandis HOM05D003304 ORTHO05D003762 4.8e-28 128.6 178 51.7
PGR031G2491 Punica granatum HOM05D003304 ORTHO05D003762 1.1e-27 127.5 180 52.8
Sed0009993 Sechium edule HOM05D003304 ORTHO05D003762 1.4e-27 127.1 184 57.1
TPR.G31283 Trifolium pratense HOM05D003304 ORTHO05D003762 1.4e-27 127.1 145 61.4
BraA06t26773Z Brassica rapa HOM05D003304 ORTHO05D003762 2.4e-27 126.3 162 62.3
Gohir.A09G238000 Gossypium hirsutum HOM05D003304 ORTHO05D003762 4.1e-27 125.6 171 59.1
Manes.03G197200 Manihot esculenta HOM05D003304 ORTHO05D003762 4.1e-27 125.6 173 48.0
BcaB07g34216 Brassica carinata HOM05D003304 ORTHO05D003762 5.3e-27 125.2 170 58.2
Sp2g19450 Schrenkiella parvula HOM05D003304 ORTHO05D003762 9.0e-27 124.4 164 47.0
CDE02G3640 Ceratophyllum demersum HOM05D003304 ORTHO05D003762 1.5e-26 123.6 181 44.2
PGR004G2799 Punica granatum HOM05D003304 ORTHO05D003762 1.5e-26 123.6 170 49.4
Lalb_Chr15g0083391 Lupinus albus HOM05D003304 ORTHO05D003762 3.4e-26 122.5 165 60.6
A06p38580 Brassica napus HOM05D003304 ORTHO05D003762 4.5e-26 122.1 162 61.1
Aa31sc105G60 Aethionema arabicum HOM05D003304 ORTHO05D003762 1.7e-25 120.2 161 57.1
CDE09G0254 Ceratophyllum demersum HOM05D003304 ORTHO05D003762 2.9e-25 119.4 175 45.1
SGA_v2.0_scaffold428G51527 Striga asiatica HOM05D003304 ORTHO05D003762 2.9e-25 119.4 201 41.8
unitig_32.g11868 Utricularia gibba HOM05D003304 ORTHO05D003762 2.9e-25 119.4 125 54.4
Nn4g22032 Nelumbo nucifera HOM05D003304 ORTHO05D003762 3.8e-25 119.0 147 48.3
SGA_v2.0_scaffold9G04881 Striga asiatica HOM05D003304 ORTHO05D003762 5.0e-25 118.6 187 44.4
Ciclev10004985m.g Citrus clementina HOM05D003304 ORTHO05D003762 6.5e-25 118.2 164 53.7
Carub.0003s0640 Capsella rubella HOM05D003304 ORTHO05D003762 8.5e-25 117.9 160 51.9
CAN.G484.45 Capsicum annuum HOM05D003304 ORTHO05D003762 1.1e-24 117.5 143 50.3
THA.LOC104818917 Tarenaya hassleriana HOM05D003304 ORTHO05D003762 1.1e-24 117.5 188 54.8
arahy.Tifrunner.gnm1.ann1.8XU14N Arachis hypogaea HOM05D003304 ORTHO05D003762 2.5e-24 116.3 174 47.1
Aa31LG5G17450 Aethionema arabicum HOM05D003304 ORTHO05D003762 4.2e-24 115.5 189 47.6
arahy.Tifrunner.gnm1.ann1.IWFQ27 Arachis hypogaea HOM05D003304 ORTHO05D003762 4.2e-24 115.5 172 46.5
BcaC09g47926 Brassica carinata HOM05D003304 ORTHO05D003762 5.5e-24 115.2 159 44.7
C07p39670 Brassica napus HOM05D003304 ORTHO05D003762 5.5e-24 115.2 162 58.6
BolC1t05580H Brassica oleracea HOM05D003304 ORTHO05D003762 5.5e-24 115.2 159 44.7
AL8G22610 Arabidopsis lyrata HOM05D003304 ORTHO05D003762 9.4e-24 114.4 163 55.8
AL3G18000 Arabidopsis lyrata HOM05D003304 ORTHO05D003762 1.2e-23 114.0 160 52.5
Eucgr.H03942 Eucalyptus grandis HOM05D003304 ORTHO05D003762 1.2e-23 114.0 171 52.6
HPP92_023378 Vanilla planifolia HOM05D003304 ORTHO05D003762 1.6e-23 113.6 127 53.5
AT3G06868 Arabidopsis thaliana HOM05D003304 ORTHO05D003762 3.6e-23 112.5 159 54.7
BolC5t34702H Brassica oleracea HOM05D003304 ORTHO05D003762 3.6e-23 112.5 174 47.7
PSO357G0352 Papaver somniferum HOM05D003304 ORTHO05D003762 3.6e-23 112.5 151 48.3
Nitab4.5_0000895g0020 Nicotiana tabacum HOM05D003304 ORTHO05D003762 4.6e-23 112.1 137 46.7
Ca_21485_v3 Cicer arietinum L. HOM05D003304 ORTHO05D003762 6.1e-23 111.7 178 53.9
THA.LOC104803101 Tarenaya hassleriana HOM05D003304 ORTHO05D003762 7.9e-23 111.3 172 53.5
BNapus_Darmor_BZH_scaffold_117p00150 Brassica napus HOM05D003304 ORTHO05D003762 1.0e-22 110.9 158 43.7
TWI09G1044 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 1.0e-22 110.9 151 44.4
TPR.G3216 Trifolium pratense HOM05D003304 ORTHO05D003762 1.4e-22 110.5 188 51.1
C05p60480 Brassica napus HOM05D003304 ORTHO05D003762 2.3e-22 109.8 158 48.7
CARHR081490 Cardamine hirsuta HOM05D003304 ORTHO05D003762 3.0e-22 109.4 155 52.9
AT5G49100 Arabidopsis thaliana HOM05D003304 ORTHO05D003762 3.9e-22 109.0 166 56.0
PSO170G6833 Papaver somniferum HOM05D003304 ORTHO05D003762 5.1e-22 108.6 152 48.0
Hund24887 Selenicereus undatus HOM05D003304 ORTHO05D003762 5.1e-22 108.6 165 45.5
BolC7t44491H Brassica oleracea HOM05D003304 ORTHO05D003762 6.7e-22 108.2 162 56.8
BraA01t04408Z Brassica rapa HOM05D003304 ORTHO05D003762 8.8e-22 107.8 158 43.7
Carub.0008s0891 Capsella rubella HOM05D003304 ORTHO05D003762 1.1e-21 107.5 166 54.8
A05p41260 Brassica napus HOM05D003304 ORTHO05D003762 2.5e-21 106.3 156 51.3
BraA05t22849Z Brassica rapa HOM05D003304 ORTHO05D003762 2.5e-21 106.3 156 50.6
ATR0582G207 Amborella trichopoda HOM05D003304 ORTHO05D003762 3.3e-21 105.9 157 47.8
Thhalv10021990m.g Eutrema salsugineum HOM05D003304 ORTHO05D003762 4.3e-21 105.5 155 56.1
Sp3g05830 Schrenkiella parvula HOM05D003304 ORTHO05D003762 9.7e-21 104.4 157 43.3
Medtr4g120050 Medicago truncatula HOM05D003304 ORTHO05D003762 4.8e-20 102.1 182 48.9
Nitab4.5_0004498g0020 Nicotiana tabacum HOM05D003304 ORTHO05D003762 6.3e-20 101.7 151 45.0
AUR62014753 Chenopodium quinoa HOM05D003304 ORTHO05D003762 2.4e-19 99.8 151 48.3
SHI00254 Sapria himalayana HOM05D003304 ORTHO05D003762 4.1e-19 99.0 187 46.0
Psat4g026560 Pisum sativum HOM05D003304 ORTHO05D003762 5.3e-19 98.6 178 48.3
AUR62016930 Chenopodium quinoa HOM05D003304 ORTHO05D003762 2.6e-18 96.3 75 64.0
unitig_749.g13391 Utricularia gibba HOM05D003304 ORTHO05D003762 4.5e-18 95.5 144 41.7
CiPaw.02G081100 Carya illinoinensis HOM05D003304 ORTHO05D003762 1.0e-17 94.4 78 64.1
Os04g0405500 Oryza sativa ssp. japonica HOM05D003304 ORTHO05D003762 1.7e-17 93.6 166 42.2
THA.LOC104827338 Tarenaya hassleriana HOM05D003304 ORTHO05D003762 1.7e-17 93.6 199 44.7
BcaC05g30564 Brassica carinata HOM05D003304 ORTHO05D003762 1.1e-16 90.9 162 41.4
GSVIVG01035139001 Vitis vinifera HOM05D003304 ORTHO05D003762 1.4e-16 90.5 67 71.6
unitig_26.g10550 Utricularia gibba HOM05D003304 ORTHO05D003762 3.2e-16 89.4 179 40.8
Zm00001eb084360 Zea mays HOM05D003304 ORTHO05D003762 9.4e-16 87.8 85 57.6
Os02g0526700 Oryza sativa ssp. japonica HOM05D003304 ORTHO05D003762 1.0e-14 84.3 164 39.6
HPP92_024308 Vanilla planifolia HOM05D003304 ORTHO05D003762 8.8e-14 81.3 149 45.0
HPP92_024289 Vanilla planifolia HOM05D003304 ORTHO05D003762 2.6e-13 79.7 149 45.6
BraA03t12673Z Brassica rapa HOM05D003304 ORTHO05D003762 3.3e-13 79.3 160 36.9
Zm00001eb242460 Zea mays HOM05D003304 ORTHO05D003762 3.3e-13 79.3 145 37.9
Atru.chr6.1997 Acer truncatum HOM05D003304 ORTHO05D003762 2.8e-12 76.3 121 48.8
A03p34930 Brassica napus HOM05D003304 ORTHO05D003762 4.8e-12 75.5 160 36.2
C03p42510 Brassica napus HOM05D003304 ORTHO05D003762 6.3e-12 75.1 154 42.2
BolC3t16521H Brassica oleracea HOM05D003304 ORTHO05D003762 6.3e-12 75.1 154 42.2
DCAR_030514 Daucus carota HOM05D003304 ORTHO05D003762 5.9e-10 68.6 82 53.7
MELO3C024134.2 Cucumis melo HOM05D003304 ORTHO05D003762 3.2e-08 62.8 56 60.7
DCAR_002474 Daucus carota HOM05D003304 ORTHO05D003762 1.2e-07 60.8 44 68.2
Sc08g0008170 Simmondsia chinensis HOM05D003304 ORTHO05D003762 1.6e-07 60.5 56 58.9
SEGI_27408 Sequoiadendron giganteum HOM05D003304 ORTHO05D003762 4.0e-06 55.8 150 34.7


User provided reference genes

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