Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 8.3e-160 567.0 290 100.0
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 3.0e-109 399.1 281 76.5
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 5.7e-68 261.9 242 61.2
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 1.3e-67 260.8 208 67.8
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 7.0e-66 255.0 266 54.9
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 5.7e-52 208.8 208 54.8
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 3.2e-50 203.0 209 51.2
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 7.0e-50 201.8 163 66.3
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 2.7e-49 199.9 160 66.9
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 5.6e-47 192.2 228 48.2
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 1.6e-46 190.7 214 45.8
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 3.1e-45 186.4 263 43.0
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 3.1e-45 186.4 209 48.8
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 4.4e-44 182.6 242 40.9
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 5.8e-44 182.2 263 42.2
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.7e-43 180.6 207 47.8
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 3.7e-43 179.5 264 41.3
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 6.4e-43 178.7 222 45.0
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 4.6e-41 172.6 207 46.4
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 6.0e-41 172.2 190 52.1
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 6.0e-41 172.2 222 44.6
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 2.5e-39 166.8 284 37.3
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 9.5e-39 164.9 207 44.4
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 1.2e-38 164.5 238 38.7
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 8.1e-38 161.8 223 39.5
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 1.1e-37 161.4 205 42.9
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 1.4e-37 161.0 284 35.6
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 8.9e-37 158.3 167 49.7
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 2.6e-36 156.8 243 40.3
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 9.2e-34 148.3 221 41.6
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 1.6e-33 147.5 202 46.0
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 6.0e-33 145.6 164 47.6
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 6.0e-33 145.6 164 47.6
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.0e-32 143.3 172 46.5
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 1.1e-31 141.4 162 47.5
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 1.9e-31 140.6 169 46.2
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 7.3e-31 138.7 172 44.8
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 1.6e-30 137.5 233 34.3
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 2.0e-28 130.6 156 45.5
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 9.9e-28 128.3 133 47.4
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 4.6e-25 119.4 222 29.7
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 1.9e-23 114.0 113 54.0
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 5.2e-21 105.9 125 46.4
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 1.5e-20 104.4 125 44.0
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 7.6e-20 102.1 128 43.8
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 2.2e-19 100.5 132 40.2
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 2.2e-19 100.5 132 39.4
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 3.8e-19 99.8 141 40.4
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 3.8e-19 99.8 132 40.2
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 6.4e-19 99.0 140 40.0
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 1.9e-18 97.4 140 40.0
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 4.2e-18 96.3 125 41.6
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 7.1e-18 95.5 132 39.4
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 2.1e-17 94.0 132 37.9
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 6.0e-17 92.4 142 38.7
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 2.2e-11 73.9 176 27.8
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 4.9e-11 72.8 146 30.1
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 1.4e-10 71.2 148 29.7
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 1.0e-08 65.1 146 27.4
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 4.3e-07 59.7 146 29.5
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 3.7e-06 56.6 148 23.6
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 3.7e-06 56.6 217 23.0


User provided reference genes

Program Settings