Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15118 Vaccinium macrocarpon HOM05D004995 ORTHO05D006034 2.5e-62 241.9 117 100.0
Dinv10081 Davidia involucrata HOM05D004995 ORTHO05D006034 3.5e-32 141.7 77 84.4
Actinidia25841 Actinidia chinensis HOM05D004995 ORTHO05D006034 5.9e-32 141.0 74 83.8
Rhsim01G0290000 Rhododendron simsii HOM05D004995 ORTHO05D006034 5.9e-32 141.0 77 83.1
Gorai.008G140900 Gossypium raimondii HOM05D004995 ORTHO05D006034 7.8e-32 140.6 77 80.5
CSS0035665 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.0e-31 140.2 77 77.9
CSS0012776 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.3e-31 139.8 77 77.9
TWI75G0138 Tripterygium wilfordii HOM05D004995 ORTHO05D006034 1.7e-31 139.4 76 81.6
Actinidia21007 Actinidia chinensis HOM05D004995 ORTHO05D006034 2.9e-31 138.7 77 76.6
Cfa005817 Carpinus fangiana HOM05D004995 ORTHO05D006034 3.8e-31 138.3 77 79.2
Haze_05021 Corylus avellana HOM05D004995 ORTHO05D006034 5.0e-31 137.9 77 77.9
Thecc.01G311300 Theobroma cacao HOM05D004995 ORTHO05D006034 5.0e-31 137.9 77 76.6
TAR633G0044 Trochodendron aralioides HOM05D004995 ORTHO05D006034 5.0e-31 137.9 77 79.2
Potri.014G122400 Populus trichocarpa HOM05D004995 ORTHO05D006034 8.6e-31 137.1 77 77.9
Oeu047387.1 Olea europaea HOM05D004995 ORTHO05D006034 1.5e-30 136.3 77 76.6
Oeu008461.1 Olea europaea HOM05D004995 ORTHO05D006034 1.9e-30 136.0 76 77.6
Lsat_1_v5_gn_8_165441 Lactuca sativa HOM05D004995 ORTHO05D006034 3.3e-30 135.2 77 72.7
COL.COLO4_23251 Corchorus olitorius HOM05D004995 ORTHO05D006034 7.3e-30 134.0 77 76.6
Nn3g21651 Nelumbo nucifera HOM05D004995 ORTHO05D006034 1.2e-29 133.3 77 74.0
Sabra14G0090800 Salix brachista HOM05D004995 ORTHO05D006034 1.6e-29 132.9 77 74.0
PGSC0003DMG400009006 Solanum tuberosum HOM05D004995 ORTHO05D006034 1.6e-29 132.9 76 76.3
MD11G1316300 Malus domestica HOM05D004995 ORTHO05D006034 2.1e-29 132.5 80 71.2
PGR044G2031 Punica granatum HOM05D004995 ORTHO05D006034 2.8e-29 132.1 76 75.0
QL12p020317 Quercus lobata HOM05D004995 ORTHO05D006034 2.8e-29 132.1 77 71.4
Cc02_g27310 Coffea canephora HOM05D004995 ORTHO05D006034 6.1e-29 131.0 76 78.9
Sabra02G0160100 Salix brachista HOM05D004995 ORTHO05D006034 6.1e-29 131.0 77 74.0
Cpa.g.sc18.23 Carica papaya HOM05D004995 ORTHO05D006034 8.0e-29 130.6 77 74.0
HanXRQChr06g0167831 Helianthus annuus HOM05D004995 ORTHO05D006034 1.0e-28 130.2 77 71.4
MD03G1296700 Malus domestica HOM05D004995 ORTHO05D006034 1.4e-28 129.8 77 72.7
SGA_v2.0_scaffold376G50269 Striga asiatica HOM05D004995 ORTHO05D006034 1.8e-28 129.4 74 75.7
CiPaw.07G116000 Carya illinoinensis HOM05D004995 ORTHO05D006034 2.3e-28 129.0 77 72.7
Manes.01G226600 Manihot esculenta HOM05D004995 ORTHO05D006034 2.3e-28 129.0 77 75.3
Sp6g02000 Schrenkiella parvula HOM05D004995 ORTHO05D006034 2.3e-28 129.0 77 72.7
Ciclev10024590m.g Citrus clementina HOM05D004995 ORTHO05D006034 3.0e-28 128.6 77 75.3
DCAR_012367 Daucus carota HOM05D004995 ORTHO05D006034 3.0e-28 128.6 74 78.4
HanXRQChr15g0464181 Helianthus annuus HOM05D004995 ORTHO05D006034 3.0e-28 128.6 77 71.4
Lalb_Chr02g0146751 Lupinus albus HOM05D004995 ORTHO05D006034 4.0e-28 128.3 77 71.4
Nitab4.5_0013957g0010 Nicotiana tabacum HOM05D004995 ORTHO05D006034 4.0e-28 128.3 101 62.4
Medtr1g087290 Medicago truncatula HOM05D004995 ORTHO05D006034 5.2e-28 127.9 77 74.0
Nitab4.5_0001301g0150 Nicotiana tabacum HOM05D004995 ORTHO05D006034 5.2e-28 127.9 69 82.6
Potri.002G197400 Populus trichocarpa HOM05D004995 ORTHO05D006034 5.2e-28 127.9 77 72.7
Migut.D00092 Erythranthe guttata HOM05D004995 ORTHO05D006034 6.8e-28 127.5 77 75.3
Lj1A19G23 Lonicera japonica HOM05D004995 ORTHO05D006034 8.9e-28 127.1 94 66.0
Peaxi162Scf00001g10213 Petunia axillaris HOM05D004995 ORTHO05D006034 8.9e-28 127.1 75 76.0
Prupe.8G270500 Prunus persica HOM05D004995 ORTHO05D006034 8.9e-28 127.1 76 75.0
Atru.chr5.1036 Acer truncatum HOM05D004995 ORTHO05D006034 1.2e-27 126.7 77 75.3
CsaV3_7G029870 Cucumis sativus L. HOM05D004995 ORTHO05D006034 1.5e-27 126.3 77 70.1
Hund09619 Selenicereus undatus HOM05D004995 ORTHO05D006034 1.5e-27 126.3 76 71.1
Sed0026389 Sechium edule HOM05D004995 ORTHO05D006034 2.0e-27 125.9 77 68.8
BcaB01g02426 Brassica carinata HOM05D004995 ORTHO05D006034 3.4e-27 125.2 77 70.1
A03p31220 Brassica napus HOM05D004995 ORTHO05D006034 3.4e-27 125.2 77 70.1
CANSAT25G2589 Cannabis sativa HOM05D004995 ORTHO05D006034 3.4e-27 125.2 77 72.7
CAN.G362.42 Capsicum annuum HOM05D004995 ORTHO05D006034 3.4e-27 125.2 76 75.0
Peaxi162Scf00058g03010 Petunia axillaris HOM05D004995 ORTHO05D006034 3.4e-27 125.2 77 72.7
TPR.G19766 Trifolium pratense HOM05D004995 ORTHO05D006034 3.4e-27 125.2 77 68.8
Glyma.10G014100 Glycine max HOM05D004995 ORTHO05D006034 4.4e-27 124.8 77 71.4
Thhalv10028365m.g Eutrema salsugineum HOM05D004995 ORTHO05D006034 5.8e-27 124.4 77 70.1
Glyma.02G013500 Glycine max HOM05D004995 ORTHO05D006034 5.8e-27 124.4 77 70.1
arahy.Tifrunner.gnm1.ann1.KJ11SU Arachis hypogaea HOM05D004995 ORTHO05D006034 7.5e-27 124.0 77 68.8
arahy.Tifrunner.gnm1.ann1.SI6M6S Arachis hypogaea HOM05D004995 ORTHO05D006034 7.5e-27 124.0 77 68.8
Sc24g0003210 Simmondsia chinensis HOM05D004995 ORTHO05D006034 7.5e-27 124.0 77 66.2
Solyc06g009680.4 Solanum lycopersicum HOM05D004995 ORTHO05D006034 9.8e-27 123.6 77 70.1
Sopen06g004320 Solanum pennellii HOM05D004995 ORTHO05D006034 9.8e-27 123.6 77 70.1
BraA03t12302Z Brassica rapa HOM05D004995 ORTHO05D006034 1.3e-26 123.2 77 68.8
Aa31LG5G1780 Aethionema arabicum HOM05D004995 ORTHO05D006034 1.7e-26 122.9 76 71.1
Nitab4.5_0000363g0330 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.7e-26 122.9 77 71.4
VMungo0720G1458 Vigna mungo HOM05D004995 ORTHO05D006034 1.7e-26 122.9 77 70.1
BolC3t16092H Brassica oleracea HOM05D004995 ORTHO05D006034 2.2e-26 122.5 77 68.8
C03p38070 Brassica napus HOM05D004995 ORTHO05D006034 2.9e-26 122.1 77 68.8
BcaC01g06775 Brassica carinata HOM05D004995 ORTHO05D006034 3.7e-26 121.7 77 68.8
Haze_05025 Corylus avellana HOM05D004995 ORTHO05D006034 4.9e-26 121.3 109 55.0
CAN.G1280.22 Capsicum annuum HOM05D004995 ORTHO05D006034 1.1e-25 120.2 77 67.5
Phvul.007G215300 Phaseolus vulgaris HOM05D004995 ORTHO05D006034 1.9e-25 119.4 77 67.5
Psat6g162360 Pisum sativum HOM05D004995 ORTHO05D006034 3.2e-25 118.6 77 68.8
Lj5g0006877 Lotus japonicus HOM05D004995 ORTHO05D006034 9.2e-25 117.1 77 64.9
CARHR250290 Cardamine hirsuta HOM05D004995 ORTHO05D006034 2.0e-24 115.9 74 68.9
PSO170G6821 Papaver somniferum HOM05D004995 ORTHO05D006034 2.0e-24 115.9 77 63.6
AT4G02110 Arabidopsis thaliana HOM05D004995 ORTHO05D006034 2.7e-24 115.5 77 68.8
PSO357G0286 Papaver somniferum HOM05D004995 ORTHO05D006034 2.7e-24 115.5 77 63.6
Carub.0006s3511 Capsella rubella HOM05D004995 ORTHO05D006034 3.5e-24 115.2 77 64.9
Nitab4.5_0006144g0040 Nicotiana tabacum HOM05D004995 ORTHO05D006034 3.5e-24 115.2 77 67.5
THA.LOC104825943 Tarenaya hassleriana HOM05D004995 ORTHO05D006034 3.5e-24 115.2 77 66.2
Ca_10292_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 4.6e-24 114.8 77 67.5
RcHm_v2.0_Chr7g0241761 Rosa chinensis HOM05D004995 ORTHO05D006034 7.8e-24 114.0 77 62.3
Aqoxy5G04290 Aquilegia oxysepala HOM05D004995 ORTHO05D006034 1.0e-23 113.6 77 63.6
Ah.11g049350 Amaranthus hybridus HOM05D004995 ORTHO05D006034 1.7e-23 112.8 79 60.8
ECA236G3500 Erigeron canadensis HOM05D004995 ORTHO05D006034 2.3e-23 112.5 74 67.6
DCAR_005771 Daucus carota HOM05D004995 ORTHO05D006034 5.0e-23 111.3 77 63.6
AL6G51110 Arabidopsis lyrata HOM05D004995 ORTHO05D006034 8.6e-23 110.5 77 63.6
FAN04G1561 Fragaria x ananassa HOM05D004995 ORTHO05D006034 8.6e-23 110.5 77 58.4
FAN13G2181 Fragaria x ananassa HOM05D004995 ORTHO05D006034 8.6e-23 110.5 77 58.4
EL10As5g23507 Beta vulgaris HOM05D004995 ORTHO05D006034 1.1e-22 110.2 77 63.6
FvH4_5g39450 Fragaria vesca HOM05D004995 ORTHO05D006034 3.3e-22 108.6 77 57.1
FAN18G1671 Fragaria x ananassa HOM05D004995 ORTHO05D006034 3.3e-22 108.6 77 57.1
HPP92_002051 Vanilla planifolia HOM05D004995 ORTHO05D006034 2.8e-21 105.5 76 57.9
MBI18_g28452_MAGBIO Magnolia biondii HOM05D004995 ORTHO05D006034 8.0e-21 104.0 76 59.2
FAN08G3258 Fragaria x ananassa HOM05D004995 ORTHO05D006034 3.4e-19 98.6 92 47.8
Os03g0304400 Oryza sativa ssp. japonica HOM05D004995 ORTHO05D006034 3.4e-19 98.6 77 58.4
Ca_30263_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 9.8e-19 97.1 77 59.7
AUR62024673 Chenopodium quinoa HOM05D004995 ORTHO05D006034 6.4e-18 94.4 77 51.9
AUR62011830 Chenopodium quinoa HOM05D004995 ORTHO05D006034 1.4e-17 93.2 81 54.3
Mapoly0010s0152 Marchantia polymorpha HOM05D004995 ORTHO05D006034 1.9e-17 92.8 82 54.9
ATR0706G147 Amborella trichopoda HOM05D004995 ORTHO05D006034 3.2e-17 92.0 74 51.4
Zm00001eb014460 Zea mays HOM05D004995 ORTHO05D006034 3.2e-17 92.0 76 51.3
Duzib138G1673 Durio zibethinus HOM05D004995 ORTHO05D006034 1.6e-16 89.7 46 84.8
Zm00001eb331400 Zea mays HOM05D004995 ORTHO05D006034 6.0e-16 87.8 74 51.4
AagrBONN_evm.TU.Sc2ySwM_368.2357 Anthoceros agrestis HOM05D004995 ORTHO05D006034 7.8e-16 87.4 74 52.7
Gohir.D12G129700 Gossypium hirsutum HOM05D004995 ORTHO05D006034 1.0e-15 87.0 46 82.6
HanXRQChr15g0473761 Helianthus annuus HOM05D004995 ORTHO05D006034 3.0e-15 85.5 54 68.5
Dinv33107 Davidia involucrata HOM05D004995 ORTHO05D006034 5.1e-15 84.7 46 78.3
SMO367G0571 Selaginella moellendorffii HOM05D004995 ORTHO05D006034 4.3e-14 81.6 69 56.5
ECA233G6055 Erigeron canadensis HOM05D008775 ORTHO05D000004 7.3e-14 80.9 53 69.8
Lsat_1_v5_gn_4_70341 Lactuca sativa HOM05D004995 ORTHO05D011291 1.1e-12 77.0 75 50.7
Gohir.A12G126200 Gossypium hirsutum HOM05D004995 ORTHO05D006034 1.2e-11 73.6 38 81.6
unitig_90.g27435 Utricularia gibba HOM05D004995 ORTHO05D006034 1.2e-11 73.6 55 60.0
CAN.G224.3 Capsicum annuum HOM05D003804 ORTHO05D004350 4.9e-10 68.2 47 63.8
SHI20084 Sapria himalayana HOM05D004995 ORTHO05D006034 1.6e-08 63.2 38 71.1
CAN.G74.2 Capsicum annuum HOM05D004995 ORTHO05D002292 3.5e-08 62.0 37 75.7
MD11G1233500 Malus domestica HOM05D004995 ORTHO05D006034 7.8e-08 60.8 40 62.5
RcHm_v2.0_Chr3g0497341 Rosa chinensis HOM05D004995 ORTHO05D006034 1.0e-07 60.5 39 66.7


User provided reference genes

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