Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 9.6e-98 360.1 180 100.0
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 5.7e-66 254.6 177 75.7
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 6.9e-56 221.1 189 64.0
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 4.5e-55 218.4 193 62.7
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.3e-49 200.3 174 63.2
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.5e-45 186.8 181 58.6
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.0e-43 180.6 179 56.4
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.4e-43 180.3 179 56.4
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 3.3e-42 175.6 149 63.8
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 7.5e-42 174.5 142 60.6
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.4e-40 169.5 133 65.4
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 4.1e-40 168.7 137 63.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 4.1e-40 168.7 138 65.2
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 4.1e-40 168.7 139 62.6
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 5.3e-40 168.3 168 56.0
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 9.1e-40 167.5 176 54.0
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.2e-39 167.2 143 60.8
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.6e-39 166.8 137 61.3
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.0e-39 166.4 140 63.6
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.0e-39 166.4 136 61.8
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 2.0e-39 166.4 136 58.8
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 3.5e-39 165.6 175 54.9
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 4.5e-39 165.2 138 60.9
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 4.5e-39 165.2 136 59.6
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 5.9e-39 164.9 138 60.1
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 1.0e-38 164.1 127 66.9
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 1.0e-38 164.1 173 54.9
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 1.3e-38 163.7 139 58.3
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.3e-38 163.7 139 61.9
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.3e-38 163.7 139 61.9
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.7e-38 163.3 138 60.1
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 3.8e-38 162.2 141 59.6
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 3.8e-38 162.2 136 64.0
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 5.0e-38 161.8 139 59.7
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.5e-38 161.4 145 54.5
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.1e-37 160.6 145 56.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 1.1e-37 160.6 139 63.3
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.5e-37 160.2 137 57.7
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.5e-37 160.2 138 62.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.5e-37 160.2 145 53.8
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.9e-37 159.8 174 53.4
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.9e-37 159.8 139 59.7
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 2.5e-37 159.5 138 60.9
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.2e-37 158.7 152 53.3
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 4.2e-37 158.7 176 51.7
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 4.2e-37 158.7 138 59.4
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 4.2e-37 158.7 138 60.1
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 7.2e-37 157.9 139 59.7
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 9.4e-37 157.5 136 61.8
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 4.7e-36 155.2 133 65.4
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 4.7e-36 155.2 176 52.3
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 4.7e-36 155.2 180 51.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-35 153.7 147 53.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.4e-35 153.7 180 50.6
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.4e-35 153.7 180 50.6
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.8e-35 153.3 180 50.6
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 4.0e-35 152.1 135 57.8
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.2e-34 150.6 136 57.4
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.2e-34 150.6 147 53.1
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.5e-34 150.2 132 60.6
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 2.0e-34 149.8 132 62.9
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 2.0e-34 149.8 177 49.2
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 2.0e-34 149.8 132 57.6
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.6e-34 149.4 135 51.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 9.8e-34 147.5 138 50.7
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.3e-33 147.1 135 54.1
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 1.3e-33 147.1 124 62.1
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.3e-33 147.1 142 51.4
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.2e-33 146.4 132 58.3
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.4e-32 143.7 138 58.7
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 2.4e-32 142.9 144 49.3
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 3.1e-32 142.5 179 50.3
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 4.1e-32 142.1 136 52.2
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.2e-31 140.6 140 54.3
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.6e-31 140.2 122 59.0
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 2.0e-31 139.8 121 57.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 3.5e-31 139.0 172 48.3
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 4.5e-31 138.7 137 47.4
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 7.7e-31 137.9 184 43.5
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.3e-30 137.1 140 51.4
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.3e-30 137.1 144 48.6
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.7e-30 136.7 140 55.0
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.9e-30 136.0 138 52.9
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 5.0e-30 135.2 140 54.3
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.5e-29 133.7 136 47.8
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.5e-29 133.7 136 47.8
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.2e-29 132.1 141 56.7
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 7.2e-29 131.3 129 49.6
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 7.2e-29 131.3 126 48.4
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.2e-28 130.6 126 48.4
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.2e-28 130.6 126 48.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 2.8e-28 129.4 136 46.3
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.8e-28 129.4 136 44.9
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 6.1e-28 128.3 127 55.1
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.0e-27 127.5 126 46.8
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.0e-27 127.5 112 58.9
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.8e-27 126.7 136 43.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 3.0e-27 125.9 138 51.4
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 6.8e-27 124.8 126 46.8
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 6.8e-27 124.8 126 46.8
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 6.8e-27 124.8 136 44.1
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 6.8e-27 124.8 187 42.8
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 3.4e-26 122.5 136 44.9
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.4e-24 116.3 108 56.5
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 5.4e-24 115.2 152 46.1
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 9.2e-24 114.4 118 45.8
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 3.6e-20 102.4 77 59.7
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.0e-19 99.0 76 60.5
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 7.3e-13 78.2 129 35.7
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.1e-08 64.3 136 33.1
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.5e-07 59.3 37 70.3
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 6.0e-07 58.5 50 54.0


User provided reference genes

Program Settings