Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15028 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 1.9e-167 592.4 294 100.0
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 6.5e-128 461.1 274 84.7
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 6.5e-120 434.5 274 79.9
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 4.2e-119 431.8 274 79.2
Dinv30672 Davidia involucrata HOM05D002969 ORTHO05D003308 8.5e-112 407.5 274 74.5
Dinv34332 Davidia involucrata HOM05D002969 ORTHO05D003308 8.5e-112 407.5 274 74.5
Dinv04036 Davidia involucrata HOM05D002969 ORTHO05D003308 1.2e-110 403.7 274 73.7
vmacro15025 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 2.7e-110 402.5 278 76.3
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 1.0e-101 374.0 274 68.6
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 6.8e-101 371.3 275 69.1
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 2.8e-94 349.4 276 64.9
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 1.0e-93 347.4 274 66.1
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 2.3e-93 346.3 274 63.9
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 6.4e-91 338.2 275 64.4
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 3.2e-90 335.9 269 63.6
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 5.4e-90 335.1 269 62.8
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 4.6e-89 332.0 269 63.9
PSO210G6259 Papaver somniferum HOM05D002969 ORTHO05D003308 6.0e-89 331.6 286 61.2
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 7.8e-89 331.3 269 62.5
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 1.0e-88 330.9 274 63.1
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 1.0e-88 330.9 269 62.8
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 1.3e-88 330.5 278 59.7
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 2.3e-88 329.7 274 63.1
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 7.3e-87 324.7 278 59.4
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 2.1e-86 323.2 274 60.9
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 2.8e-86 322.8 274 60.2
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 1.8e-85 320.1 274 60.2
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 4.4e-84 315.5 274 58.4
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 5.8e-84 315.1 269 62.1
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 7.5e-84 314.7 274 58.0
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 2.9e-83 312.8 274 58.0
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 3.7e-83 312.4 274 57.7
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 4.9e-83 312.0 274 58.0
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 1.4e-82 310.5 272 57.4
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 2.4e-82 309.7 276 58.3
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 5.4e-82 308.5 274 59.9
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 7.1e-82 308.1 274 57.7
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 1.2e-81 307.4 273 58.2
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 7.8e-81 304.7 275 60.4
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 1.0e-80 304.3 274 57.7
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.3e-80 303.9 273 59.0
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 3.0e-80 302.8 273 56.0
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 8.6e-80 301.2 273 56.4
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 3.3e-79 299.3 273 56.0
SEGI_24599 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 9.5e-79 297.7 276 55.8
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 9.5e-79 297.7 272 56.2
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.2e-78 297.4 269 59.1
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.2e-78 297.4 277 57.8
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.8e-78 296.2 277 58.1
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 2.8e-78 296.2 272 57.4
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 3.6e-78 295.8 276 57.2
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 8.1e-78 294.7 277 57.8
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 8.1e-78 294.7 277 57.8
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 8.1e-78 294.7 281 56.6
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 1.1e-77 294.3 274 57.3
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 1.1e-77 294.3 274 56.2
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 1.1e-77 294.3 274 55.8
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 5.2e-77 292.0 272 55.5
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 5.2e-77 292.0 272 55.5
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 8.9e-77 291.2 273 56.8
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 8.9e-77 291.2 277 57.0
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 1.5e-76 290.4 272 55.1
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 1.5e-76 290.4 272 55.1
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 2.0e-76 290.0 272 55.1
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 2.0e-76 290.0 278 56.5
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 7.6e-76 288.1 273 56.8
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 7.6e-76 288.1 274 55.8
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 9.9e-76 287.7 272 54.8
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 1.3e-75 287.3 271 56.5
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 1.7e-75 287.0 270 55.6
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 2.2e-75 286.6 275 52.7
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 2.9e-75 286.2 273 54.2
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 4.9e-75 285.4 275 52.7
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 2.4e-74 283.1 272 54.8
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 4.1e-74 282.3 272 54.4
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 9.2e-74 281.2 271 55.4
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 1.6e-73 280.4 273 53.8
CSS0047313 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 1.0e-72 277.7 179 77.7
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 1.0e-72 277.7 273 54.2
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 1.3e-72 277.3 272 54.0
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 1.3e-72 277.3 276 54.0
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 2.3e-72 276.6 271 53.1
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 3.9e-72 275.8 272 52.6
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 5.1e-72 275.4 280 53.6
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 1.1e-71 274.2 276 54.3
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 1.5e-71 273.9 271 53.9
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 1.5e-71 273.9 271 53.5
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 2.5e-71 273.1 276 55.1
MELO3C006797.2 Cucumis melo HOM05D002969 ORTHO05D003308 2.5e-71 273.1 280 53.2
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 2.5e-71 273.1 271 52.8
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 5.6e-71 271.9 278 51.8
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 7.3e-71 271.6 275 54.2
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 8.1e-70 268.1 272 53.7
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 1.8e-69 266.9 275 53.1
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 1.8e-69 266.9 275 54.2
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 5.2e-69 265.4 280 52.1
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 6.9e-69 265.0 275 52.7
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 1.2e-68 264.2 271 52.4
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 1.2e-68 264.2 272 53.7
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 1.3e-67 260.8 286 50.3
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 6.4e-67 258.5 272 52.2
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 6.4e-67 258.5 277 50.2
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 1.1e-66 257.7 272 52.2
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 4.2e-66 255.8 273 50.9
Ah.01g018180 Amaranthus hybridus HOM05D002969 ORTHO05D003308 2.1e-65 253.4 275 50.5
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.3e-62 244.2 274 46.4
SHI10580 Sapria himalayana HOM05D002969 ORTHO05D000023 1.8e-61 240.4 294 46.3
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 2.7e-57 226.5 280 47.9
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 8.7e-56 221.5 280 47.5
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 2.6e-52 209.9 275 45.8
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 5.8e-52 208.8 277 43.3
HPP92_011313 Vanilla planifolia HOM05D002969 ORTHO05D003308 5.8e-52 208.8 271 43.2
Zm00001eb254660 Zea mays HOM05D002969 ORTHO05D003308 9.9e-52 208.0 293 39.9
Zm00001eb254680 Zea mays HOM05D002969 ORTHO05D003308 9.9e-52 208.0 293 39.9
Zm00001eb247960 Zea mays HOM05D002969 ORTHO05D003308 6.4e-51 205.3 284 40.5
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 8.4e-51 204.9 196 56.1
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 8.4e-51 204.9 282 42.9
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 1.9e-50 203.8 287 37.3
Zm00001eb254750 Zea mays HOM05D002969 ORTHO05D003308 1.9e-50 203.8 275 40.4
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 2.1e-49 200.3 289 39.1
AT1G59460 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 1.3e-48 197.6 207 53.1
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.1e-45 188.0 278 41.4
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 4.0e-45 186.0 278 41.7
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 4.5e-44 182.6 289 37.4
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.3e-43 181.0 278 41.0
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 4.6e-41 172.6 282 36.2
PSO017G1278 Papaver somniferum HOM05D002969 ORTHO05D003308 3.3e-39 166.4 178 52.2
Glyma.12G000400 Glycine max HOM05D002969 ORTHO05D003308 7.4e-39 165.2 179 49.2
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.4e-29 134.4 286 31.5
COL.COLO4_30698 Corchorus olitorius HOM05D002969 ORTHO05D003308 4.2e-26 122.9 147 44.9
Ah.01g009880 Amaranthus hybridus HOM05D002969 ORTHO05D003308 4.5e-20 102.8 102 54.9
Lalb_Chr10g0094391 Lupinus albus HOM05D002969 ORTHO05D003308 1.8e-16 90.9 126 42.9
SEGI_24169 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 1.1e-10 71.6 91 41.8
CARHR117350 Cardamine hirsuta HOM05D002969 ORTHO05D003308 7.2e-10 68.9 81 44.4
unitig_26.g8927 Utricularia gibba HOM05D002969 ORTHO05D003308 3.7e-06 56.6 85 44.7


User provided reference genes

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