Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15025 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 1.3e-174 616.3 310 100.0
vmacro15028 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 3.8e-110 402.1 278 76.3
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 1.3e-102 377.1 261 75.1
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 7.7e-95 351.3 261 69.3
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 1.8e-91 340.1 261 68.6
Dinv30672 Davidia involucrata HOM05D002969 ORTHO05D003308 3.3e-90 335.9 261 66.7
Dinv34332 Davidia involucrata HOM05D002969 ORTHO05D003308 3.3e-90 335.9 261 66.7
Dinv04036 Davidia involucrata HOM05D002969 ORTHO05D003308 4.8e-89 332.0 261 65.9
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 1.4e-83 313.9 262 64.1
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 1.4e-80 303.9 261 61.7
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 5.5e-77 292.0 261 59.4
PSO210G6259 Papaver somniferum HOM05D002969 ORTHO05D003308 4.7e-76 288.9 280 57.5
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 8.0e-76 288.1 261 60.2
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 1.8e-75 287.0 261 57.9
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 8.8e-75 284.6 260 57.7
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 1.5e-74 283.9 261 58.6
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 2.2e-73 280.0 261 58.6
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 3.7e-73 279.3 261 57.9
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 2.0e-71 273.5 261 55.2
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 4.5e-71 272.3 261 57.9
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 4.5e-71 272.3 261 55.2
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 1.0e-70 271.2 261 55.6
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 2.2e-70 270.0 264 53.0
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 2.2e-70 270.0 261 55.6
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 9.4e-69 264.6 261 54.0
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 1.2e-68 264.2 263 54.0
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 2.1e-68 263.5 258 53.9
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 6.1e-68 261.9 261 54.0
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.0e-67 261.2 261 55.2
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 1.4e-67 260.8 264 52.3
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.8e-67 260.4 261 53.6
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 1.8e-67 260.4 271 53.9
SEGI_24599 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 3.0e-67 259.6 261 53.6
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 6.8e-67 258.5 261 53.3
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 2.0e-66 256.9 261 54.4
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 5.7e-66 255.4 261 52.9
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 7.5e-66 255.0 261 51.7
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 9.8e-66 254.6 261 52.1
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 1.7e-65 253.8 261 52.5
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 1.7e-65 253.8 261 54.0
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 2.2e-65 253.4 261 52.5
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 2.8e-65 253.1 261 52.1
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 6.3e-65 251.9 260 53.8
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 3.1e-64 249.6 262 55.3
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 3.1e-64 249.6 261 51.7
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 7.0e-64 248.4 262 52.7
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.2e-63 247.7 261 51.7
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 1.2e-63 247.7 261 51.7
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 1.2e-63 247.7 261 52.9
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.6e-63 247.3 261 53.3
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.6e-63 247.3 261 51.7
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 7.7e-63 245.0 262 51.5
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 7.7e-63 245.0 262 51.5
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.0e-62 244.6 262 53.4
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 1.3e-62 244.2 261 51.3
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 2.3e-62 243.4 261 50.6
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.3e-62 243.4 262 53.8
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 2.9e-62 243.0 262 52.3
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 6.5e-62 241.9 262 53.4
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 6.5e-62 241.9 262 53.4
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 1.9e-61 240.4 260 51.2
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 2.5e-61 240.0 262 53.1
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 3.3e-61 239.6 261 51.0
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 7.2e-61 238.4 262 52.7
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 9.5e-61 238.0 261 50.2
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 2.1e-60 236.9 261 49.8
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 2.8e-60 236.5 261 51.7
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 8.0e-60 235.0 261 51.0
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 8.0e-60 235.0 261 51.0
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 1.0e-59 234.6 261 51.0
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 1.0e-59 234.6 261 51.0
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 1.0e-59 234.6 261 51.0
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 1.8e-59 233.8 261 51.0
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.8e-59 233.8 260 50.4
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 6.8e-59 231.9 261 50.6
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 6.8e-59 231.9 261 50.6
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 6.8e-59 231.9 261 51.0
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 2.6e-58 229.9 267 50.6
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 5.7e-58 228.8 261 50.2
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 5.7e-58 228.8 261 49.4
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 7.5e-58 228.4 261 49.8
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 9.8e-58 228.0 261 50.6
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 1.3e-57 227.6 261 49.4
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 1.7e-57 227.3 262 49.2
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 1.7e-57 227.3 263 49.4
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 3.7e-57 226.1 261 52.5
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 4.9e-57 225.7 261 52.1
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 6.3e-57 225.3 261 52.5
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 8.3e-57 224.9 261 50.2
MELO3C006797.2 Cucumis melo HOM05D002969 ORTHO05D003308 9.2e-56 221.5 267 49.4
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 1.6e-55 220.7 262 48.9
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 2.7e-55 219.9 262 48.9
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 3.5e-55 219.5 261 47.9
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 7.8e-55 218.4 262 49.2
CSS0047313 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 2.9e-54 216.5 122 85.2
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 6.6e-54 215.3 260 48.5
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 5.6e-53 212.2 261 47.5
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 7.3e-53 211.8 265 47.9
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 7.3e-53 211.8 267 47.9
Ah.01g018180 Amaranthus hybridus HOM05D002969 ORTHO05D003308 1.2e-52 211.1 262 46.6
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 1.2e-52 211.1 263 46.0
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 1.6e-52 210.7 262 48.9
SHI10580 Sapria himalayana HOM05D002969 ORTHO05D000023 2.8e-52 209.9 262 45.4
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 1.8e-51 207.2 260 49.2
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 1.8e-51 207.2 262 48.1
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 6.4e-49 198.7 262 45.0
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.2e-47 194.5 260 42.3
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 1.6e-47 194.1 268 43.7
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 6.6e-46 188.7 268 43.7
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 7.3e-45 185.3 122 73.8
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 1.2e-44 184.5 261 40.2
AT1G59460 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 6.2e-44 182.2 251 44.2
Zm00001eb247960 Zea mays HOM05D002969 ORTHO05D003308 1.8e-43 180.6 261 38.7
Zm00001eb254660 Zea mays HOM05D002969 ORTHO05D003308 4.0e-43 179.5 261 38.7
Zm00001eb254680 Zea mays HOM05D002969 ORTHO05D003308 4.0e-43 179.5 261 38.7
Zm00001eb254750 Zea mays HOM05D002969 ORTHO05D003308 4.0e-43 179.5 261 38.7
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 4.9e-41 172.6 259 40.5
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 1.1e-40 171.4 258 41.9
HPP92_011313 Vanilla planifolia HOM05D002969 ORTHO05D003308 1.9e-40 170.6 263 40.7
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 9.2e-40 168.3 262 35.5
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 4.6e-39 166.0 268 39.6
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 7.8e-39 165.2 268 39.2
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 2.5e-37 160.2 268 38.8
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 2.5e-37 160.2 259 38.2
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 3.4e-34 149.8 269 34.6
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 9.9e-34 148.3 268 34.3
PSO017G1278 Papaver somniferum HOM05D002969 ORTHO05D003308 3.2e-32 143.3 123 62.6
Glyma.12G000400 Glycine max HOM05D002969 ORTHO05D003308 5.1e-30 136.0 123 57.7
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.9e-24 117.5 269 30.9
COL.COLO4_30698 Corchorus olitorius HOM05D002969 ORTHO05D003308 2.5e-21 107.1 92 53.3
Ah.01g009880 Amaranthus hybridus HOM05D002969 ORTHO05D003308 3.1e-19 100.1 98 53.1
Lalb_Chr10g0094391 Lupinus albus HOM05D002969 ORTHO05D003308 3.9e-14 83.2 70 61.4
SEGI_24169 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 1.6e-12 77.8 50 70.0
CARHR117350 Cardamine hirsuta HOM05D002969 ORTHO05D003308 6.7e-06 55.8 42 64.3


User provided reference genes

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