Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 0.0e+00 1095.9 659 100.0
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.0e-60 238.0 161 78.3
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 1.6e-57 228.4 161 74.5
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.1e-53 215.7 159 69.2
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 2.0e-52 211.5 159 65.4
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.0e-52 211.5 158 67.7
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 3.4e-52 210.7 159 66.0
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 3.4e-52 210.7 159 66.0
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 4.5e-52 210.3 159 67.9
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 4.5e-52 210.3 156 67.3
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 4.5e-52 210.3 159 66.7
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.0e-51 209.1 159 66.7
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.3e-51 208.8 159 66.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.3e-51 208.8 159 65.4
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.7e-51 208.4 159 66.7
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.7e-51 208.4 159 66.0
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.7e-51 208.4 159 66.0
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 2.2e-51 208.0 159 66.7
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 2.2e-51 208.0 156 67.9
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.9e-51 207.6 159 66.0
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 6.5e-51 206.5 159 64.2
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 8.5e-51 206.1 159 65.4
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 8.5e-51 206.1 156 67.3
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 8.5e-51 206.1 159 65.4
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.4e-50 205.3 156 66.0
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.9e-50 204.9 156 65.4
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 2.5e-50 204.5 161 64.0
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.5e-50 204.5 159 64.2
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.5e-50 204.5 158 65.2
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 3.2e-50 204.1 159 64.2
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 3.2e-50 204.1 159 63.5
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 3.2e-50 204.1 159 63.5
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 4.2e-50 203.8 159 64.8
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 4.2e-50 203.8 159 65.4
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 5.5e-50 203.4 156 64.7
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 5.5e-50 203.4 156 64.7
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 7.2e-50 203.0 156 64.1
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 9.4e-50 202.6 158 65.2
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.2e-49 202.2 161 64.6
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.6e-49 201.8 159 63.5
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 2.7e-49 201.1 159 62.9
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 2.7e-49 201.1 159 61.6
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 3.6e-49 200.7 159 63.5
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 3.6e-49 200.7 161 62.7
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 4.6e-49 200.3 156 62.8
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 7.9e-49 199.5 159 63.5
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.0e-48 199.1 152 67.8
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 1.4e-48 198.7 150 68.0
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.4e-48 198.7 156 64.1
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.8e-48 198.4 156 66.0
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.8e-48 198.4 156 66.0
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 3.0e-48 197.6 159 61.6
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 3.0e-48 197.6 161 63.4
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 3.9e-48 197.2 161 62.1
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 3.9e-48 197.2 160 64.4
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.9e-48 197.2 161 63.4
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 5.1e-48 196.8 161 61.5
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 5.1e-48 196.8 159 62.9
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 5.1e-48 196.8 161 63.4
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 1.1e-47 195.7 161 62.1
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 1.1e-47 195.7 156 63.5
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 1.5e-47 195.3 159 61.6
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 2.0e-47 194.9 161 62.1
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 2.5e-47 194.5 160 63.8
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 5.7e-47 193.4 160 62.5
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 7.4e-47 193.0 155 63.2
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 7.4e-47 193.0 160 61.9
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 3.7e-46 190.7 150 65.3
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 4.8e-46 190.3 159 60.4
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 4.8e-46 190.3 159 61.0
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 1.1e-45 189.1 160 60.0
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.4e-45 188.7 160 60.0
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.4e-45 188.7 160 60.0
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.8e-45 188.3 159 61.0
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 2.4e-45 188.0 160 60.6
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 2.4e-45 188.0 160 60.6
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.4e-45 188.0 159 60.4
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 3.1e-45 187.6 161 59.0
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 3.1e-45 187.6 156 62.2
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 5.3e-45 186.8 160 59.4
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 6.9e-45 186.4 160 59.4
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 1.5e-44 185.3 160 58.8
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 3.4e-44 184.1 157 60.5
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 5.0e-43 180.3 159 59.7
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.4e-42 178.7 159 57.2
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.2e-42 177.6 270 49.6
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 5.5e-42 176.8 156 58.3
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 6.1e-41 173.3 155 56.8
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 1.4e-40 172.2 149 58.4
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 6.7e-40 169.9 154 56.5
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.4e-37 161.4 130 63.8
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 2.0e-36 158.3 126 64.3
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.1e-34 152.5 112 65.2
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.5e-31 142.1 109 70.6
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 9.7e-31 139.4 151 47.7
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 5.9e-28 130.2 138 50.7
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 9.4e-26 122.9 183 39.9
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.5e-23 115.5 113 61.1
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.7e-22 112.1 183 38.3
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.1e-21 109.4 170 37.6
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.4e-21 108.2 152 42.1
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 7.0e-21 106.7 150 39.3
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.8e-19 100.9 256 43.8
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 8.5e-19 99.8 91 60.4
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 1.1e-18 99.4 105 50.5
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.2e-17 95.9 71 57.7
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.2e-17 95.9 92 58.7
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 3.6e-17 94.4 147 39.5
vmacro18395 Vaccinium macrocarpon HOM05D007742 ORTHO05D004072 4.7e-17 94.0 114 53.5
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 6.1e-17 93.6 260 48.1
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.8e-16 92.0 94 54.3
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.0e-16 90.9 92 54.3
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 8.8e-16 89.7 253 33.6
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 1.4e-13 82.4 52 69.2
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.3e-11 75.9 72 58.3
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 6.1e-09 67.0 95 43.2
Rhsim09G0035500 Rhododendron simsii HOM05D057533 ORTHO05D339599 6.8e-08 63.5 40 82.5
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 6.8e-08 63.5 69 50.7
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 1.5e-07 62.4 151 31.1
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 2.6e-07 61.6 75 44.0
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.6e-07 61.6 81 46.9


User provided reference genes

Program Settings