Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.8e-34 148.7 75 100.0
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 5.7e-28 127.1 86 80.2
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 1.2e-25 119.4 72 80.6
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 4.5e-25 117.5 72 76.4
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 1.3e-24 115.9 70 80.0
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 5.0e-24 114.0 70 77.1
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 8.5e-24 113.2 70 78.6
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 2.5e-23 111.7 72 72.2
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 5.5e-23 110.5 72 73.6
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 5.5e-23 110.5 72 73.6
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 1.2e-22 109.4 69 72.5
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 2.7e-22 108.2 72 72.2
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 4.7e-22 107.5 70 71.4
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 4.7e-22 107.5 70 75.7
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 4.7e-22 107.5 70 71.4
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 4.7e-22 107.5 72 72.2
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 6.1e-22 107.1 70 68.6
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 6.1e-22 107.1 72 72.2
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 6.1e-22 107.1 72 72.2
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 6.1e-22 107.1 65 78.5
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 6.1e-22 107.1 70 71.4
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 1.4e-21 105.9 72 70.8
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 1.4e-21 105.9 70 71.4
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 1.4e-21 105.9 70 71.4
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 1.8e-21 105.5 70 70.0
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.8e-21 105.5 70 68.6
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 1.8e-21 105.5 68 73.5
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 1.8e-21 105.5 70 71.4
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 2.3e-21 105.1 70 70.0
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 3.0e-21 104.8 66 75.8
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 3.0e-21 104.8 73 67.1
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 3.9e-21 104.4 68 72.1
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 3.9e-21 104.4 70 68.6
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 5.2e-21 104.0 70 71.4
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 5.2e-21 104.0 70 65.7
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 6.7e-21 103.6 70 71.4
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 6.7e-21 103.6 67 74.6
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 6.7e-21 103.6 68 73.5
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 6.7e-21 103.6 72 66.7
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 8.8e-21 103.2 64 75.0
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 1.1e-20 102.8 70 71.4
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 1.1e-20 102.8 62 79.0
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 1.5e-20 102.4 68 70.6
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.5e-20 102.4 67 74.6
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 1.5e-20 102.4 62 75.8
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 2.6e-20 101.7 70 70.0
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 4.4e-20 100.9 64 73.4
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 4.4e-20 100.9 62 77.4
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 5.7e-20 100.5 64 75.0
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 9.7e-20 99.8 62 75.8
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.3e-19 99.4 67 73.1
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 2.2e-19 98.6 64 70.3
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 2.2e-19 98.6 70 67.1
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 2.2e-19 98.6 70 67.1
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 2.8e-19 98.2 64 68.8
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 2.8e-19 98.2 70 68.6
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 3.7e-19 97.8 64 70.3
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 3.7e-19 97.8 64 70.3
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 3.7e-19 97.8 64 70.3
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 4.8e-19 97.4 66 69.7
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.1e-18 96.3 59 76.3
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 1.4e-18 95.9 64 68.8
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 1.4e-18 95.9 101 52.5
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 1.4e-18 95.9 59 74.6
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 1.8e-18 95.5 59 74.6
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 2.4e-18 95.1 64 67.2
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 3.1e-18 94.7 66 66.7
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 4.1e-18 94.4 53 83.0
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 4.1e-18 94.4 64 67.2
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 7.0e-18 93.6 62 72.6
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 9.1e-18 93.2 55 80.0
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 1.2e-17 92.8 64 65.6
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 2.0e-17 92.0 66 65.2
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 2.6e-17 91.7 69 65.2
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 3.5e-17 91.3 62 66.1
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 3.5e-17 91.3 62 66.1
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 5.9e-17 90.5 64 64.1
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 5.9e-17 90.5 64 64.1
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 7.7e-17 90.1 51 80.4
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.0e-16 89.7 50 84.0
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 2.2e-16 88.6 62 66.1
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 2.9e-16 88.2 66 63.6
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 2.9e-16 88.2 49 87.8
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 3.8e-16 87.8 70 65.7
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 3.8e-16 87.8 68 61.8
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 1.5e-15 85.9 53 71.7
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.9e-15 85.5 50 80.0
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 2.5e-15 85.1 71 62.0
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 2.5e-15 85.1 58 69.0
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 4.2e-15 84.3 53 75.5
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 7.2e-15 83.6 49 81.6
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 9.4e-15 83.2 49 79.6
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 1.6e-14 82.4 54 72.2
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 6.8e-13 77.0 56 71.4
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 1.2e-12 76.3 50 66.0
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.3e-11 72.8 51 64.7
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.8e-11 71.6 51 64.7
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 8.3e-11 70.1 46 63.0
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 7.7e-09 63.5 46 60.9
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 3.8e-08 61.2 54 55.6
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 3.2e-07 58.2 47 51.1


User provided reference genes

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