Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 3.6e-194 681.4 347 100.0
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.3e-87 327.4 210 81.0
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 1.3e-66 257.7 208 67.8
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 1.3e-63 247.7 216 66.2
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 2.9e-58 229.9 212 63.7
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 4.2e-57 226.1 214 61.2
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 8.7e-55 218.4 257 51.0
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 1.3e-53 214.5 214 59.8
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 5.3e-52 209.1 158 69.0
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 3.8e-50 203.0 208 56.2
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 3.8e-50 203.0 213 59.2
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 1.1e-49 201.4 226 58.0
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 1.4e-49 201.1 221 58.4
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.4e-49 201.1 244 51.6
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.2e-49 199.9 213 54.5
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 3.2e-49 199.9 212 52.4
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 3.2e-49 199.9 218 56.9
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 5.4e-49 199.1 206 58.7
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 9.3e-49 198.4 221 56.1
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 6.0e-48 195.7 219 58.0
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 6.0e-48 195.7 221 54.8
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 1.3e-47 194.5 221 55.7
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 1.3e-47 194.5 223 52.0
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 2.3e-47 193.7 225 52.9
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 3.0e-47 193.4 212 52.8
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 3.0e-47 193.4 213 53.1
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 3.9e-47 193.0 222 55.9
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 5.1e-47 192.6 222 52.3
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 6.7e-47 192.2 210 55.2
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.1e-46 191.4 209 55.5
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.1e-46 191.4 217 54.8
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 1.1e-46 191.4 217 54.8
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 1.5e-46 191.0 211 54.0
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.5e-46 191.0 217 54.8
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.9e-46 190.7 207 53.1
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 1.9e-46 190.7 224 51.3
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.3e-46 189.5 218 57.3
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 4.3e-46 189.5 218 57.3
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 5.6e-46 189.1 214 54.7
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 5.6e-46 189.1 204 53.9
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 9.6e-46 188.3 219 54.3
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 9.6e-46 188.3 208 56.7
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 2.8e-45 186.8 226 54.9
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 3.7e-45 186.4 211 53.1
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 3.7e-45 186.4 206 55.8
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 6.2e-45 185.7 228 51.3
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 8.1e-45 185.3 209 53.1
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.4e-44 184.5 217 53.0
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 1.8e-44 184.1 218 54.1
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 1.8e-44 184.1 224 54.0
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 2.4e-44 183.7 214 55.1
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 2.4e-44 183.7 216 53.2
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 2.4e-44 183.7 214 53.3
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 3.1e-44 183.3 212 55.2
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 4.0e-44 183.0 216 54.2
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 4.0e-44 183.0 208 55.8
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 4.0e-44 183.0 218 51.4
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 5.3e-44 182.6 212 53.8
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.3e-44 182.6 217 54.4
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 1.2e-43 181.4 204 52.5
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 1.2e-43 181.4 210 54.8
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.5e-43 181.0 209 56.0
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.5e-43 181.0 215 54.0
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 7.6e-43 178.7 219 50.7
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 1.3e-42 177.9 216 54.2
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 1.7e-42 177.6 202 53.0
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 2.2e-42 177.2 217 51.2
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 4.9e-42 176.0 217 52.5
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.9e-42 176.0 210 56.2
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 4.9e-42 176.0 205 53.7
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 8.4e-42 175.3 206 54.9
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 3.2e-41 173.3 207 51.2
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 7.1e-41 172.2 216 53.7
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 7.1e-41 172.2 220 51.4
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 7.1e-41 172.2 207 53.6
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 9.3e-41 171.8 204 50.0
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.2e-40 171.4 217 50.7
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 1.2e-40 171.4 215 52.1
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 4.6e-40 169.5 213 49.3
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.6e-40 169.5 217 52.1
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 1.0e-39 168.3 204 49.0
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 1.3e-39 167.9 220 49.1
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.8e-39 167.5 216 50.9
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 2.3e-39 167.2 220 47.7
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 2.3e-39 167.2 210 50.5
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 3.9e-39 166.4 218 50.0
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 5.1e-39 166.0 208 48.6
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 8.7e-39 165.2 214 51.9
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.5e-38 163.7 214 51.4
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 4.3e-38 162.9 217 47.0
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 5.7e-38 162.5 216 50.0
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 7.4e-38 162.2 220 50.5
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 7.4e-38 162.2 219 51.1
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 6.2e-37 159.1 217 47.5
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.4e-36 157.9 214 51.9
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 2.4e-36 157.1 207 50.2
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 3.1e-36 156.8 205 47.3
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 3.1e-36 156.8 210 48.1
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 4.1e-36 156.4 214 46.7
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 5.3e-36 156.0 213 49.3
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 6.9e-36 155.6 177 54.2
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 2.6e-35 153.7 243 46.1
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.6e-35 153.7 204 50.0
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 1.0e-34 151.8 211 49.3
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 1.0e-34 151.8 211 49.3
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.0e-34 151.8 205 50.2
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 2.2e-34 150.6 208 47.6
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 2.2e-34 150.6 206 46.6
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 2.2e-34 150.6 216 47.2
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 2.9e-34 150.2 217 49.3
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 3.8e-34 149.8 220 47.7
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 3.8e-34 149.8 190 48.4
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 3.8e-34 149.8 213 48.8
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 6.5e-34 149.1 210 50.5
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 1.1e-33 148.3 210 47.6
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.1e-33 148.3 207 48.3
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 1.4e-33 147.9 235 46.4
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 2.5e-33 147.1 205 48.3
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 3.2e-33 146.7 245 43.3
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 9.3e-33 145.2 212 47.2
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 9.3e-33 145.2 206 44.7
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 1.6e-32 144.4 212 47.2
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 2.1e-32 144.1 212 47.2
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 6.1e-32 142.5 212 46.7
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 5.1e-31 139.4 213 45.1
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 5.1e-31 139.4 216 43.1
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 6.7e-31 139.0 190 50.0
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 8.7e-31 138.7 196 48.0
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 4.3e-30 136.3 198 48.5
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 1.3e-29 134.8 232 40.9
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 1.8e-28 131.0 201 45.3
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 6.9e-28 129.0 209 43.1
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 6.9e-28 129.0 209 43.1
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 2.6e-27 127.1 201 43.3
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 1.0e-26 125.2 201 42.8
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.3e-26 124.8 206 42.2
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 1.3e-26 124.8 219 45.7
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 1.3e-26 124.8 203 42.4
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 6.5e-26 122.5 299 33.4
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 5.5e-25 119.4 159 50.3
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 9.4e-25 118.6 210 40.5
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 7.9e-24 115.5 210 41.9
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 1.0e-23 115.2 201 42.8
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 1.8e-23 114.4 199 42.7
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 3.0e-23 113.6 219 42.0
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 6.7e-23 112.5 210 40.0
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 1.7e-21 107.8 179 45.3
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 3.7e-21 106.7 212 39.2
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 1.1e-20 105.1 195 40.5
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 9.1e-20 102.1 149 45.0
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 1.2e-19 101.7 281 35.2
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 4.5e-19 99.8 179 40.2
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 3.8e-18 96.7 161 41.6
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 5.0e-18 96.3 130 48.5
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 2.1e-16 90.9 192 39.1
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 3.6e-16 90.1 192 39.1
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 1.4e-15 88.2 209 37.8
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 3.0e-15 87.0 89 58.4
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 3.1e-12 77.0 102 45.1
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 1.5e-11 74.7 97 46.4
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 2.9e-10 70.5 98 44.9
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 8.5e-10 68.9 70 58.6
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 1.2e-08 65.1 85 50.6
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 1.6e-08 64.7 85 44.7
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 6.1e-08 62.8 45 71.1
VMungo0540G2292 Vigna mungo HOM05D004016 ORTHO05D004732 2.6e-06 57.4 79 44.3
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 3.3e-06 57.0 95 41.1
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 7.5e-06 55.8 92 40.2


User provided reference genes

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