Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 3.5e-113 411.8 225 100.0
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 2.3e-85 319.3 221 81.9
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 3.9e-56 222.2 220 62.7
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.4e-42 177.2 205 55.1
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 3.9e-40 169.1 146 68.5
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 2.1e-38 163.3 188 58.5
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.5e-36 157.1 196 56.1
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 3.8e-35 152.5 223 50.7
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 1.4e-34 150.6 203 51.2
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 2.5e-34 149.8 229 51.5
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.6e-33 147.1 198 52.5
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.1e-33 146.7 196 51.0
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 6.1e-33 145.2 123 65.9
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.3e-32 143.3 213 48.8
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 3.0e-32 142.9 171 50.3
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 6.7e-32 141.7 137 60.6
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 8.7e-32 141.4 173 52.0
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 8.7e-32 141.4 212 50.0
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 8.7e-32 141.4 190 53.7
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 1.9e-31 140.2 209 50.7
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 2.5e-31 139.8 124 63.7
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 7.4e-31 138.3 206 49.5
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 7.4e-31 138.3 157 53.5
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 7.4e-31 138.3 222 46.8
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 9.7e-31 137.9 196 49.5
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 2.8e-30 136.3 171 53.8
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 4.8e-30 135.6 133 60.9
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 1.1e-29 134.4 153 55.6
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 1.4e-29 134.0 167 51.5
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 1.8e-29 133.7 170 50.0
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 3.1e-29 132.9 144 55.6
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 5.3e-29 132.1 207 45.9
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 5.3e-29 132.1 133 59.4
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 5.3e-29 132.1 101 67.3
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 6.9e-29 131.7 167 52.7
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.9e-29 131.7 220 46.8
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 6.9e-29 131.7 220 46.8
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 9.0e-29 131.3 136 54.4
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.0e-28 130.2 170 52.9
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.0e-28 130.2 222 45.0
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.4e-28 129.4 161 54.7
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 3.4e-28 129.4 162 50.6
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 3.4e-28 129.4 197 49.7
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 5.9e-28 128.6 146 56.8
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 7.7e-28 128.3 179 50.8
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 1.0e-27 127.9 171 50.3
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 1.7e-27 127.1 169 53.3
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 1.7e-27 127.1 181 50.8
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 3.8e-27 125.9 187 49.7
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 3.8e-27 125.9 132 56.1
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 3.8e-27 125.9 132 56.1
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 5.0e-27 125.6 176 50.0
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 5.0e-27 125.6 182 48.9
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 6.5e-27 125.2 180 51.1
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.5e-27 125.2 218 46.3
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 1.1e-26 124.4 209 47.8
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 1.4e-26 124.0 155 52.3
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 5.5e-26 122.1 224 44.2
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 7.2e-26 121.7 146 52.7
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 1.2e-25 120.9 189 47.1
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 2.1e-25 120.2 192 47.9
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 2.1e-25 120.2 102 62.7
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 2.1e-25 120.2 152 50.7
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 2.7e-25 119.8 175 50.3
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 3.6e-25 119.4 130 56.2
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 4.6e-25 119.0 191 46.6
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 1.0e-24 117.9 177 46.3
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 1.0e-24 117.9 196 45.4
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 1.8e-24 117.1 163 49.7
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.8e-24 117.1 215 42.3
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 2.3e-24 116.7 131 58.0
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 3.9e-24 115.9 208 42.3
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 5.1e-24 115.5 150 48.0
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 1.5e-23 114.0 99 66.7
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 2.0e-23 113.6 166 44.0
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 2.0e-23 113.6 115 59.1
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 3.3e-23 112.8 209 43.1
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 7.4e-23 111.7 159 46.5
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.3e-22 110.9 109 56.0
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 2.2e-22 110.2 143 46.2
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 4.8e-22 109.0 191 45.0
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 4.8e-22 109.0 202 43.6
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.8e-22 109.0 134 53.0
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 6.3e-22 108.6 175 44.6
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 1.1e-21 107.8 201 42.3
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 4.1e-21 105.9 184 44.0
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 5.3e-21 105.5 163 47.2
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 5.3e-21 105.5 129 54.3
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 5.3e-21 105.5 169 45.0
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 6.9e-21 105.1 118 51.7
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.2e-20 104.4 193 43.0
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 1.5e-20 104.0 147 49.7
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 3.4e-20 102.8 74 70.3
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 4.5e-20 102.4 147 48.3
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 4.5e-20 102.4 91 58.2
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 1.0e-19 101.3 182 44.0
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 1.7e-19 100.5 93 59.1
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 2.2e-19 100.1 114 54.4
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 3.8e-19 99.4 202 41.1
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 3.8e-19 99.4 197 38.6
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 8.5e-19 98.2 187 39.6
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 1.4e-18 97.4 162 44.4
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.9e-18 97.1 204 40.7
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.9e-18 97.1 123 52.0
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 5.5e-18 95.5 96 58.3
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 5.5e-18 95.5 204 40.2
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 7.2e-18 95.1 132 50.8
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 9.4e-18 94.7 162 43.2
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 1.2e-17 94.4 107 54.2
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.6e-17 94.0 204 40.2
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 4.7e-17 92.4 139 46.0
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 6.1e-17 92.0 145 42.8
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.8e-16 90.5 95 53.7
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 2.0e-15 87.0 136 46.3
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.2e-14 83.6 124 41.1
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 8.2e-14 81.6 143 37.1
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 1.2e-12 77.8 168 40.5
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 1.6e-12 77.4 135 44.4
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 2.6e-12 76.6 136 39.0
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 2.2e-11 73.6 104 45.2
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 2.9e-11 73.2 69 59.4
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.5e-10 70.1 174 35.1
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 7.2e-10 68.6 105 48.6
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.2e-10 68.6 105 48.6
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 9.4e-10 68.2 103 49.5
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 9.4e-10 68.2 103 49.5
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 1.4e-08 64.3 67 50.7
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 8.8e-08 61.6 141 32.6
Actinidia09490 Actinidia chinensis HOM05D005884 ORTHO05D007282 5.7e-07 58.9 73 54.8


User provided reference genes

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