Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 0.0e+00 1225.3 615 100.0
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 6.5e-279 963.8 610 80.7
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 3.4e-272 941.4 618 77.5
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 5.0e-263 911.0 610 77.7
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 2.6e-243 845.5 577 73.8
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.1e-241 840.1 616 69.5
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 3.5e-240 835.1 598 72.4
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 1.3e-239 833.2 590 71.0
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 5.0e-239 831.2 551 78.8
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 8.6e-239 830.5 602 70.3
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 2.6e-235 818.9 584 72.6
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 2.4e-233 812.4 610 67.0
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 2.7e-232 808.9 597 68.8
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 1.3e-231 806.6 603 67.3
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 9.5e-230 800.4 590 68.1
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 1.2e-229 800.0 588 66.2
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 3.4e-227 792.0 589 69.8
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 7.5e-227 790.8 609 65.4
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 2.9e-226 788.9 603 68.2
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 3.7e-226 788.5 613 65.9
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 1.1e-225 786.9 604 68.2
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 7.0e-225 784.3 590 66.3
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 1.6e-224 783.1 589 69.3
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 2.7e-224 782.3 642 64.5
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 4.6e-224 781.6 589 69.1
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 1.0e-223 780.4 620 64.4
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.0e-223 780.4 610 64.8
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 1.3e-223 780.0 622 66.4
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 3.9e-223 778.5 616 65.4
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 8.6e-223 777.3 582 68.7
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 8.6e-223 777.3 616 65.6
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 3.3e-222 775.4 587 65.4
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 7.3e-222 774.2 622 65.0
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 1.6e-221 773.1 609 65.4
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 2.8e-221 772.3 619 65.1
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 2.8e-221 772.3 581 69.4
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 6.2e-221 771.2 612 64.7
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.1e-220 770.4 620 66.3
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 1.4e-220 770.0 621 66.3
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 5.2e-220 768.1 592 67.4
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 8.9e-220 767.3 570 69.1
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 5.8e-219 764.6 615 67.5
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 5.8e-219 764.6 614 64.8
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 1.3e-218 763.5 595 66.2
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 8.3e-218 760.8 534 72.1
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 1.4e-217 760.0 591 67.2
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 4.1e-217 758.4 616 63.5
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 9.2e-217 757.3 616 64.4
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 2.7e-216 755.7 625 67.5
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 2.7e-216 755.7 607 66.2
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 2.7e-216 755.7 586 66.9
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 6.0e-216 754.6 617 65.0
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 6.0e-216 754.6 593 66.8
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 2.8e-213 745.7 586 66.6
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 1.8e-212 743.0 614 63.0
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 3.1e-212 742.3 597 66.0
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 1.2e-211 740.3 622 61.4
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 1.2e-211 740.3 611 64.2
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.5e-211 740.0 611 62.4
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 1.5e-211 740.0 611 63.5
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 2.0e-211 739.6 597 63.1
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 3.4e-211 738.8 589 64.2
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 7.5e-211 737.6 612 63.4
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 9.9e-211 737.3 679 59.2
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 2.9e-210 735.7 602 64.6
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 8.3e-210 734.2 604 62.6
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 1.1e-209 733.8 583 65.5
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.4e-209 733.4 611 62.0
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 4.1e-209 731.9 579 64.9
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 2.1e-208 729.6 610 63.4
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 2.7e-208 729.2 583 64.8
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 7.8e-208 727.6 595 63.0
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 1.7e-207 726.5 615 62.1
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 2.3e-207 726.1 607 62.3
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 3.0e-207 725.7 618 61.7
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 1.5e-206 723.4 605 61.8
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 9.5e-206 720.7 618 60.4
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 2.1e-205 719.5 611 60.9
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.8e-204 716.5 591 62.3
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 6.8e-204 714.5 594 63.0
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 1.2e-203 713.8 594 62.6
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 1.5e-203 713.4 594 62.6
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 2.6e-203 712.6 595 62.5
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 2.6e-203 712.6 599 62.4
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 5.8e-203 711.4 612 62.3
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 9.9e-203 710.7 613 60.2
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 4.9e-202 708.4 607 62.8
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 3.2e-201 705.7 640 61.2
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 3.9e-199 698.7 599 61.6
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 6.6e-199 698.0 611 61.9
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 2.8e-197 692.6 541 64.1
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 4.0e-196 688.7 588 60.9
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 7.6e-195 684.5 609 58.8
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 4.2e-193 678.7 610 55.2
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 1.6e-189 666.8 618 58.9
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 2.1e-189 666.4 595 60.0
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 2.2e-186 656.4 587 58.1
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 5.4e-185 651.7 552 64.3
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 6.0e-184 648.3 602 56.3
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 5.3e-180 635.2 588 56.6
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.2e-179 634.0 609 56.0
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 2.6e-179 632.9 569 60.6
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 8.4e-178 627.9 444 71.4
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 1.4e-177 627.1 608 55.9
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 1.8e-175 620.2 606 55.0
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 5.3e-172 608.6 429 70.4
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 2.1e-168 596.7 570 57.7
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 7.4e-158 561.6 344 79.7
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 5.3e-156 555.4 454 61.2
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 2.2e-154 550.1 545 55.4
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.4e-153 547.4 602 50.2
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 2.5e-129 466.8 639 43.5
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 7.5e-118 428.7 611 38.6
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 1.9e-108 397.5 567 41.8
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 3.2e-108 396.7 515 44.3
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 3.0e-106 390.2 584 39.7
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 6.2e-96 355.9 353 52.4
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 5.6e-89 332.8 251 65.7
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 7.3e-89 332.4 376 48.7
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 3.2e-84 317.0 390 46.2
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 6.0e-75 286.2 247 59.5
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.8e-71 274.6 229 60.7
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 7.9e-67 259.2 443 33.9
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 5.8e-62 243.0 185 67.0
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 1.4e-60 238.4 204 59.3
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.0e-58 232.3 303 44.9
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 2.5e-36 157.9 270 40.7
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 4.2e-36 157.1 225 45.3
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 4.5e-30 137.1 147 46.9
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 5.7e-25 120.2 231 34.6
unitig_0.g371 Utricularia gibba HOM05D005553 ORTHO05D006866 1.8e-23 115.2 75 72.0
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 8.5e-21 106.3 224 37.5
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 8.5e-21 106.3 326 29.4
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 7.2e-20 103.2 429 24.9
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 3.4e-17 94.4 104 58.7
MCO09G019 Micromonas commoda HOM05D005553 ORTHO05D006866 2.7e-14 84.7 149 36.9
TPR.G39542 Trifolium pratense HOM05D005553 ORTHO05D006866 7.7e-14 83.2 47 70.2
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 4.8e-08 63.9 53 54.7


User provided reference genes

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