Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14740 Vaccinium macrocarpon HOM05D002516 ORTHO05D002703 2.2e-117 425.6 214 100.0
Rhsim01G0254000 Rhododendron simsii HOM05D002516 ORTHO05D002703 1.7e-37 160.2 94 87.2
Dinv19179 Davidia involucrata HOM05D002516 ORTHO05D002703 2.6e-25 119.8 105 62.9
Hma1.2p1_0226F.1_g095436 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 9.8e-25 117.9 102 63.7
Dinv12654 Davidia involucrata HOM05D002516 ORTHO05D002703 1.7e-24 117.1 119 60.5
CSS0033368 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 2.2e-24 116.7 105 62.9
Rhsim13G0047300 Rhododendron simsii HOM05D002516 ORTHO05D002703 3.7e-24 115.9 108 58.3
Hma1.2p1_2668F.1_g326570 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 6.4e-24 115.2 102 62.7
vmacro02780 Vaccinium macrocarpon HOM05D002516 ORTHO05D002703 1.9e-23 113.6 108 58.3
Actinidia09470 Actinidia chinensis HOM05D002516 ORTHO05D002703 4.1e-23 112.5 105 65.7
CSS0005528 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 3.0e-21 106.3 107 61.7
Lj1C88T6 Lonicera japonica HOM05D002516 ORTHO05D002703 3.3e-20 102.8 118 52.5
Actinidia39434 Actinidia chinensis HOM05D002516 ORTHO05D002703 4.3e-20 102.4 105 58.1
Hma1.2p1_0149F.1_g066360 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 7.3e-20 101.7 104 57.7
Atru.chr2.3423 Acer truncatum HOM05D002516 ORTHO05D002703 2.8e-19 99.8 106 58.5
Atru.chr6.1421 Acer truncatum HOM05D002516 ORTHO05D002703 2.8e-19 99.8 106 58.5
Actinidia30057 Actinidia chinensis HOM05D002516 ORTHO05D002703 3.6e-19 99.4 105 58.1
Nitab4.5_0007846g0010 Nicotiana tabacum HOM05D002516 ORTHO05D002703 1.4e-18 97.4 105 56.2
AUR62001129 Chenopodium quinoa HOM05D002516 ORTHO05D002703 2.0e-17 93.6 107 53.3
Haze_15034 Corylus avellana HOM05D002516 ORTHO05D002703 2.0e-17 93.6 103 54.4
CiPaw.01G049600 Carya illinoinensis HOM05D002516 ORTHO05D002703 2.6e-17 93.2 100 58.0
Duzib211G0537 Durio zibethinus HOM05D002516 ORTHO05D002703 2.6e-17 93.2 101 61.4
Peaxi162Scf00238g00046 Petunia axillaris HOM05D002516 ORTHO05D002703 2.6e-17 93.2 105 54.3
Nitab4.5_0002641g0170 Nicotiana tabacum HOM05D002516 ORTHO05D002703 3.4e-17 92.8 105 56.2
Nitab4.5_0000045g0450 Nicotiana tabacum HOM05D002516 ORTHO05D002703 4.4e-17 92.4 105 54.3
TAR636G2916 Trochodendron aralioides HOM05D002516 ORTHO05D002703 4.4e-17 92.4 98 56.1
Eucgr.K02140 Eucalyptus grandis HOM05D002516 ORTHO05D002703 5.8e-17 92.0 106 52.8
Cfa004378 Carpinus fangiana HOM05D002516 ORTHO05D002703 1.7e-16 90.5 103 53.4
Hund05574 Selenicereus undatus HOM05D002516 ORTHO05D002703 2.2e-16 90.1 140 47.1
Nitab4.5_0002616g0040 Nicotiana tabacum HOM05D002516 ORTHO05D002703 3.8e-16 89.4 105 54.3
Ciclev10022263m.g Citrus clementina HOM05D002516 ORTHO05D002703 6.4e-16 88.6 105 55.2
QL09p051749 Quercus lobata HOM05D002516 ORTHO05D002703 6.4e-16 88.6 100 55.0
QL09p052462 Quercus lobata HOM05D002516 ORTHO05D002703 6.4e-16 88.6 100 55.0
Sopen06g002720 Solanum pennellii HOM05D002516 ORTHO05D002703 6.4e-16 88.6 109 51.4
Thecc.01G221100 Theobroma cacao HOM05D002516 ORTHO05D002703 6.4e-16 88.6 108 58.3
Gohir.D11G145700 Gossypium hirsutum HOM05D002516 ORTHO05D002703 8.4e-16 88.2 108 57.4
Gorai.007G156200 Gossypium raimondii HOM05D002516 ORTHO05D002703 8.4e-16 88.2 105 58.1
Solyc06g007870.3 Solanum lycopersicum HOM05D002516 ORTHO05D002703 8.4e-16 88.2 109 51.4
Nn1g07949 Nelumbo nucifera HOM05D002516 ORTHO05D002703 1.1e-15 87.8 108 48.1
TAR365G0852 Trochodendron aralioides HOM05D002516 ORTHO05D002703 1.1e-15 87.8 101 54.5
Duzib133G1084 Durio zibethinus HOM05D002516 ORTHO05D002703 1.9e-15 87.0 104 57.7
Duzib138G0225 Durio zibethinus HOM05D002516 ORTHO05D002703 1.9e-15 87.0 104 59.6
Potri.014G191400 Populus trichocarpa HOM05D002516 ORTHO05D002703 1.9e-15 87.0 103 54.4
AUR62016552 Chenopodium quinoa HOM05D002516 ORTHO05D002703 3.2e-15 86.3 108 50.9
Cpa.g.sc8.125 Carica papaya HOM05D002516 ORTHO05D002703 4.1e-15 85.9 106 56.6
Gohir.A11G139500 Gossypium hirsutum HOM05D002516 ORTHO05D002703 4.1e-15 85.9 105 57.1
Cc01_g16770 Coffea canephora HOM05D002516 ORTHO05D002703 7.1e-15 85.1 94 53.2
RcHm_v2.0_Chr6g0284181 Rosa chinensis HOM05D002516 ORTHO05D002703 1.6e-14 84.0 100 56.0
Solyc09g059450.4 Solanum lycopersicum HOM05D002516 ORTHO05D002703 1.6e-14 84.0 106 50.9
Sopen09g022610 Solanum pennellii HOM05D002516 ORTHO05D002703 1.6e-14 84.0 106 50.9
MSTRG.18838 Avicennia marina HOM05D002516 ORTHO05D002703 2.1e-14 83.6 82 57.3
Oeu007786.2 Olea europaea HOM05D002516 ORTHO05D002703 3.5e-14 82.8 89 53.9
Manes.13G049000 Manihot esculenta HOM05D002516 ORTHO05D002703 4.6e-14 82.4 112 54.5
Nn3g20050 Nelumbo nucifera HOM05D002516 ORTHO05D002703 7.8e-14 81.6 99 49.5
Ca_03039_v3 Cicer arietinum L. HOM05D002516 ORTHO05D002703 1.3e-13 80.9 112 48.2
Gorai.001G188100 Gossypium raimondii HOM05D002516 ORTHO05D002703 1.3e-13 80.9 104 57.7
Phvul.011G032000 Phaseolus vulgaris HOM05D002516 ORTHO05D002703 1.7e-13 80.5 104 51.0
PGSC0003DMG400003404 Solanum tuberosum HOM05D002516 ORTHO05D002703 1.7e-13 80.5 109 47.7
Gohir.A07G158100 Gossypium hirsutum HOM05D002516 ORTHO05D002703 2.3e-13 80.1 141 48.2
MBI07_g22277_MAGBIO Magnolia biondii HOM05D002516 ORTHO05D002703 3.0e-13 79.7 129 42.6
PGSC0003DMG400027947 Solanum tuberosum HOM05D002516 ORTHO05D002703 3.0e-13 79.7 106 50.0
SGA_v2.0_scaffold6G03500 Striga asiatica HOM05D002516 ORTHO05D002703 3.0e-13 79.7 89 53.9
DCAR_004734 Daucus carota HOM05D002516 ORTHO05D002703 5.1e-13 79.0 107 51.4
Glyma.11G103800 Glycine max HOM05D002516 ORTHO05D002703 5.1e-13 79.0 104 51.0
Glyma.12G028700 Glycine max HOM05D002516 ORTHO05D002703 6.6e-13 78.6 104 50.0
CiPaw.02G023100 Carya illinoinensis HOM05D002516 ORTHO05D002703 1.9e-12 77.0 100 48.0
TWI18G0693 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 2.5e-12 76.6 104 51.0
PGR044G0119 Punica granatum HOM05D002516 ORTHO05D002703 4.3e-12 75.9 101 49.5
TWI75G1449 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 4.3e-12 75.9 104 49.0
VMungo1127G1407 Vigna mungo HOM05D002516 ORTHO05D002703 4.3e-12 75.9 100 49.0
Migut.D02502 Erythranthe guttata HOM05D002516 ORTHO05D002703 5.6e-12 75.5 80 56.2
Manes.12G046900 Manihot esculenta HOM05D002516 ORTHO05D002703 5.6e-12 75.5 112 47.3
TWI36G0113 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 9.6e-12 74.7 138 41.3
EL10Ac7g17892 Beta vulgaris HOM05D002516 ORTHO05D002703 1.2e-11 74.3 101 48.5
Psat7g174120 Pisum sativum HOM05D002516 ORTHO05D002703 1.2e-11 74.3 110 47.3
Sc17g0002160 Simmondsia chinensis HOM05D002516 ORTHO05D002703 1.2e-11 74.3 120 45.8
CANSAT01G2920 Cannabis sativa HOM05D002516 ORTHO05D002703 1.6e-11 73.9 107 49.5
Peaxi162Scf00372g01213 Petunia axillaris HOM05D002516 ORTHO05D002703 2.1e-11 73.6 98 49.0
CANSAT01G0325 Cannabis sativa HOM05D002516 ORTHO05D002703 3.6e-11 72.8 107 49.5
unitig_899.g15409 Utricularia gibba HOM05D002516 ORTHO05D002703 4.7e-11 72.4 92 47.8
Oeu051536.1 Olea europaea HOM05D002516 ORTHO05D002703 6.2e-11 72.0 81 48.1
Prupe.8G199600 Prunus persica HOM05D002516 ORTHO05D002703 6.2e-11 72.0 104 50.0
TPR.G21567 Trifolium pratense HOM05D002516 ORTHO05D002703 6.2e-11 72.0 115 46.1
Lalb_Chr19g0139301 Lupinus albus HOM05D002516 ORTHO05D002703 1.1e-10 71.2 128 44.5
PGR083G1441 Punica granatum HOM05D002516 ORTHO05D002703 1.4e-10 70.9 101 46.5
unitig_746.g26592 Utricularia gibba HOM05D002516 ORTHO05D002703 2.4e-10 70.1 78 52.6
Gorai.001G231800 Gossypium raimondii HOM05D002516 ORTHO05D002703 3.1e-10 69.7 113 48.7
Gohir.A07G199400 Gossypium hirsutum HOM05D002516 ORTHO05D002703 4.0e-10 69.3 113 48.7
Gohir.D07G205800 Gossypium hirsutum HOM05D002516 ORTHO05D002703 5.2e-10 68.9 109 49.5
Sabra02G0186800 Salix brachista HOM05D002516 ORTHO05D002703 8.9e-10 68.2 109 54.1
CsaV3_3G030010 Cucumis sativus L. HOM05D002516 ORTHO05D002703 1.2e-09 67.8 103 49.5
Potri.002G245500 Populus trichocarpa HOM05D002516 ORTHO05D002703 1.2e-09 67.8 116 49.1
MELO3C022715.2 Cucumis melo HOM05D002516 ORTHO05D002703 1.5e-09 67.4 103 49.5
HanXRQChr07g0189501 Helianthus annuus HOM05D002516 ORTHO05D002703 2.6e-09 66.6 109 45.9
Lsat_1_v5_gn_9_15241 Lactuca sativa HOM05D002516 ORTHO05D002703 3.4e-09 66.2 107 47.7
Lalb_Chr03g0024911 Lupinus albus HOM05D002516 ORTHO05D002703 3.4e-09 66.2 120 44.2
Hund18428 Selenicereus undatus HOM05D002516 ORTHO05D002703 3.4e-09 66.2 90 45.6
ClCG07G002050 Citrullus lanatus HOM05D002516 ORTHO05D002703 4.4e-09 65.9 104 47.1
PSO017G5490 Papaver somniferum HOM05D002516 ORTHO05D002703 4.4e-09 65.9 104 40.4
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 5.8e-09 65.5 69 56.5
TAR362G0418 Trochodendron aralioides HOM05D002516 ORTHO05D002703 5.8e-09 65.5 99 46.5
FAN24G0368 Fragaria x ananassa HOM05D002516 ORTHO05D002703 9.9e-09 64.7 101 48.5
FAN27G2188 Fragaria x ananassa HOM05D002516 ORTHO05D002703 9.9e-09 64.7 106 47.2
Sed0020045 Sechium edule HOM05D002516 ORTHO05D002703 9.9e-09 64.7 103 45.6
Lsat_1_v5_gn_8_89640 Lactuca sativa HOM05D002516 ORTHO05D002703 1.7e-08 63.9 105 41.9
FvH4_2g18620 Fragaria vesca HOM05D002516 ORTHO05D002703 4.9e-08 62.4 101 46.5
PSO017G0701 Papaver somniferum HOM05D002516 ORTHO05D002703 4.9e-08 62.4 184 31.0
CDE05G1738 Ceratophyllum demersum HOM05D002516 ORTHO05D002703 1.1e-07 61.2 74 47.3
DCAR_012667 Daucus carota HOM05D002516 ORTHO05D002703 1.1e-07 61.2 125 43.2
FAN15G3756 Fragaria x ananassa HOM05D002516 ORTHO05D002703 1.1e-07 61.2 101 46.5
Lj3g0007155 Lotus japonicus HOM05D002516 ORTHO05D002703 1.4e-07 60.8 124 40.3
THA.LOC104818971 Tarenaya hassleriana HOM05D002516 ORTHO05D002703 3.2e-07 59.7 97 48.5
ECA247G3682 Erigeron canadensis HOM05D002516 ORTHO05D002703 1.6e-06 57.4 109 43.1
arahy.Tifrunner.gnm1.ann1.7060PQ Arachis hypogaea HOM05D002516 ORTHO05D002703 2.1e-06 57.0 114 43.9
arahy.Tifrunner.gnm1.ann1.WSZ24T Arachis hypogaea HOM05D002516 ORTHO05D002703 2.1e-06 57.0 114 43.9
Glyma.09G281300 Glycine max HOM05D002516 ORTHO05D002703 2.1e-06 57.0 110 41.8
PSO063G1979 Papaver somniferum HOM05D002516 ORTHO05D002703 2.1e-06 57.0 111 36.0
AT5G48655 Arabidopsis thaliana HOM05D002516 ORTHO05D002703 4.6e-06 55.8 86 48.8
Medtr4g074240 Medicago truncatula HOM05D002516 ORTHO05D002703 7.8e-06 55.1 48 68.8
SHI14525 Sapria himalayana HOM05D002516 ORTHO05D002703 7.8e-06 55.1 103 45.6


User provided reference genes

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