Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.9e-147 526.2 332 100.0
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.2e-93 347.4 321 70.7
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 1.6e-58 230.7 319 48.3
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.6e-58 230.7 346 49.1
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.4e-54 217.6 304 51.6
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 9.5e-51 204.9 344 45.9
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 3.0e-44 183.3 343 42.3
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 6.6e-44 182.2 315 47.9
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 4.7e-42 176.0 330 46.1
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 1.8e-41 174.1 271 41.7
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 1.3e-39 167.9 292 38.7
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 1.3e-39 167.9 282 42.9
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 2.2e-39 167.2 273 46.2
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 2.9e-39 166.8 321 38.6
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 1.1e-38 164.9 321 38.6
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 1.9e-38 164.1 141 58.2
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 7.1e-38 162.2 267 41.2
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.7e-37 160.2 268 48.9
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 6.0e-37 159.1 137 65.7
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 7.8e-37 158.7 146 61.0
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 1.0e-36 158.3 143 69.2
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.7e-36 157.5 286 40.9
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 3.0e-36 156.8 292 40.1
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.1e-35 154.8 275 40.4
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.1e-35 154.8 288 39.6
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.5e-35 153.7 289 40.8
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 3.3e-35 153.3 289 40.5
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 9.5e-35 151.8 311 49.2
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 2.8e-34 150.2 152 75.7
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.8e-34 150.2 143 71.3
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 3.6e-34 149.8 322 35.4
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 4.7e-34 149.4 270 45.2
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 3.1e-33 146.7 146 63.0
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 6.8e-33 145.6 296 39.9
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 8.9e-33 145.2 279 39.1
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 8.9e-33 145.2 260 48.8
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 1.5e-32 144.4 139 61.2
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 2.0e-32 144.1 289 38.8
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 2.0e-32 144.1 331 36.9
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 4.4e-32 142.9 132 61.4
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 7.6e-32 142.1 294 43.2
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 7.6e-32 142.1 296 37.2
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 7.6e-32 142.1 296 37.2
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 9.9e-32 141.7 140 69.3
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 2.2e-31 140.6 161 63.4
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 2.2e-31 140.6 161 63.4
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 2.2e-31 140.6 302 38.7
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 2.2e-31 140.6 151 63.6
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.9e-31 140.2 265 48.7
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 6.4e-31 139.0 148 60.8
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 6.4e-31 139.0 296 38.2
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 6.4e-31 139.0 150 65.3
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 8.4e-31 138.7 345 39.1
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 8.4e-31 138.7 148 54.1
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.1e-30 138.3 145 69.0
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.4e-30 137.9 160 60.0
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 1.4e-30 137.9 314 37.3
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.9e-30 137.5 158 65.2
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 7.1e-30 135.6 293 34.5
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 9.2e-30 135.2 274 36.1
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 1.2e-29 134.8 136 57.4
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 1.2e-29 134.8 139 57.6
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.2e-29 134.8 267 35.6
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 1.6e-29 134.4 144 63.9
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.6e-29 134.4 146 50.0
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.6e-29 134.4 291 41.6
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.1e-29 134.0 148 48.6
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 2.7e-29 133.7 139 51.1
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 2.7e-29 133.7 283 41.3
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 4.6e-29 132.9 279 44.8
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 7.8e-29 132.1 283 39.6
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.0e-28 131.7 137 50.4
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.3e-28 131.3 139 49.6
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 1.3e-28 131.3 139 49.6
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.7e-28 131.0 138 50.0
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 2.3e-28 130.6 140 55.7
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.3e-28 130.6 139 49.6
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 3.0e-28 130.2 149 50.3
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 5.1e-28 129.4 137 73.0
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 8.7e-28 128.6 137 59.1
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 1.9e-27 127.5 137 72.3
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 2.5e-27 127.1 305 38.7
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 4.3e-27 126.3 138 67.4
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 9.6e-27 125.2 264 42.0
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 9.6e-27 125.2 128 59.4
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 2.1e-26 124.0 137 71.5
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 2.1e-26 124.0 137 71.5
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.1e-26 124.0 342 40.1
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.4e-25 120.6 330 35.8
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 1.2e-24 118.2 128 50.8
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.2e-24 118.2 145 51.0
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.2e-24 118.2 123 77.2
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 1.2e-24 118.2 143 55.9
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 2.6e-24 117.1 145 56.6
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 2.6e-24 117.1 145 56.6
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 2.6e-24 117.1 145 56.6
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 2.6e-24 117.1 150 54.7
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 3.4e-24 116.7 139 66.9
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 3.4e-24 116.7 156 53.2
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 9.9e-24 115.2 151 62.9
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 2.2e-23 114.0 148 56.8
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 2.2e-23 114.0 145 55.9
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 4.9e-23 112.8 138 66.7
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 6.4e-23 112.5 145 55.9
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 1.1e-22 111.7 137 51.1
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.4e-22 111.3 123 53.7
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.4e-22 110.5 121 47.9
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 3.2e-22 110.2 143 63.6
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 3.2e-22 110.2 120 69.2
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.2e-21 108.2 121 47.1
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 1.6e-21 107.8 138 63.8
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 1.6e-21 107.8 145 60.7
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 6.6e-20 102.4 157 55.4
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 1.5e-19 101.3 128 44.5
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 7.3e-19 99.0 125 50.4
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 3.6e-18 96.7 121 52.1
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 6.2e-18 95.9 136 43.4
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 2.4e-17 94.0 136 48.5
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 5.8e-16 89.4 166 36.1
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 1.3e-15 88.2 149 39.6
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 1.9e-14 84.3 53 73.6
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 2.4e-14 84.0 112 45.5
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 1.2e-13 81.6 200 34.5
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 6.7e-12 75.9 112 49.1
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 8.7e-12 75.5 156 50.0
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 7.4e-11 72.4 58 56.9
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 4.8e-10 69.7 112 39.3
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 4.0e-09 66.6 111 45.9
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 4.0e-09 66.6 146 39.7
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 1.2e-08 65.1 151 51.7
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 1.1e-06 58.5 54 53.7
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 4.2e-06 56.6 29 75.9


User provided reference genes

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