Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 3.3e-133 478.4 245 100.0
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 9.7e-85 317.4 246 72.4
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 5.2e-78 295.0 251 64.5
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 1.3e-76 290.4 249 63.9
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 2.2e-76 289.7 246 63.8
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 1.7e-73 280.0 246 63.0
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.1e-67 260.8 232 61.2
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 5.9e-66 255.0 224 63.8
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 8.5e-65 251.1 245 59.2
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 5.5e-64 248.4 232 59.1
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 9.4e-64 247.7 241 57.7
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 1.2e-63 247.3 231 58.4
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 3.6e-63 245.7 242 56.2
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 6.1e-63 245.0 234 57.3
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 1.8e-62 243.4 227 59.0
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 4.0e-62 242.3 231 58.0
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 6.8e-62 241.5 220 59.1
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 6.8e-62 241.5 247 55.5
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 8.8e-62 241.1 233 57.1
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 2.0e-61 240.0 245 55.9
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 3.4e-61 239.2 247 53.8
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 4.4e-61 238.8 244 56.6
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 4.4e-61 238.8 244 55.7
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 5.7e-61 238.4 247 54.7
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 5.7e-61 238.4 232 55.6
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 9.8e-61 237.7 234 56.4
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 9.8e-61 237.7 262 54.2
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 1.3e-60 237.3 246 55.7
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.3e-60 237.3 249 53.8
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 1.3e-60 237.3 234 55.1
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.7e-60 236.9 249 55.0
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.7e-60 236.9 247 53.4
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 2.8e-60 236.1 246 54.5
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 3.7e-60 235.7 248 54.4
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 4.8e-60 235.3 231 57.6
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.1e-59 234.2 248 53.2
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.4e-59 233.8 229 55.9
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 1.8e-59 233.4 246 53.7
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 7.0e-59 231.5 231 55.8
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 1.2e-58 230.7 231 57.6
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.6e-58 230.3 231 57.6
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 2.0e-58 229.9 231 58.0
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 3.5e-58 229.2 242 51.2
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 3.5e-58 229.2 231 56.7
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 7.7e-58 228.0 252 53.2
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 1.3e-57 227.3 245 51.0
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 2.3e-57 226.5 241 52.7
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 6.5e-57 224.9 242 56.6
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 6.5e-57 224.9 248 51.6
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 6.5e-57 224.9 255 51.8
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 1.1e-56 224.2 231 54.1
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.5e-56 223.8 253 51.0
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 5.5e-56 221.9 245 53.1
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 3.6e-55 219.2 234 53.8
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 3.6e-55 219.2 256 51.6
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 8.0e-55 218.0 229 54.1
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 2.3e-54 216.5 238 50.4
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 4.0e-54 215.7 241 49.8
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 4.0e-54 215.7 223 52.9
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 5.2e-54 215.3 233 50.6
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.2e-53 214.2 238 50.0
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 1.5e-53 213.8 231 50.2
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 3.4e-53 212.6 247 49.8
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 7.5e-53 211.5 229 51.5
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.7e-52 210.3 229 51.5
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 2.8e-52 209.5 245 51.4
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 3.1e-51 206.1 231 48.5
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 5.4e-51 205.3 236 50.4
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 7.0e-51 204.9 232 48.3
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 5.9e-50 201.8 238 49.2
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 5.9e-50 201.8 230 48.7
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 7.8e-50 201.4 237 48.5
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 1.3e-49 200.7 235 48.1
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 2.3e-49 199.9 247 46.2
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 2.3e-49 199.9 232 51.3
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 2.9e-49 199.5 233 49.4
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 4.3e-48 195.7 232 47.4
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 5.2e-46 188.7 232 49.6
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 7.5e-45 184.9 245 45.7
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 5.4e-43 178.7 235 45.5
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 7.0e-43 178.3 212 46.2
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 1.6e-42 177.2 237 46.4
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 1.3e-41 174.1 224 46.4
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 5.0e-41 172.2 230 42.6
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 8.6e-41 171.4 127 68.5
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 4.3e-40 169.1 232 44.4
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.6e-39 167.2 248 43.5
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 4.7e-39 165.6 124 69.4
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 8.0e-39 164.9 221 45.2
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 1.8e-38 163.7 221 44.8
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 1.2e-37 161.0 224 44.2
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 3.4e-37 159.5 224 43.3
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 4.4e-37 159.1 251 43.8
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 5.8e-37 158.7 233 43.3
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 9.8e-37 157.9 224 43.8
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 2.2e-36 156.8 224 43.8
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 2.9e-36 156.4 225 44.0
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 4.9e-36 155.6 237 41.8
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 6.4e-36 155.2 224 45.1
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 6.4e-36 155.2 225 43.6
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 1.4e-35 154.1 251 43.0
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 1.4e-35 154.1 251 43.0
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 1.9e-35 153.7 224 45.1
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 1.9e-35 153.7 224 45.1
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 4.6e-34 149.1 99 78.8
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 1.0e-33 147.9 213 40.8
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.4e-30 137.5 224 40.2
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 2.0e-29 133.7 152 51.3
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 2.9e-28 129.8 233 36.1
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.2e-26 124.4 214 39.7
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 1.7e-25 120.6 145 48.3
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 3.3e-16 89.7 234 32.5
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 1.4e-14 84.3 237 27.8
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 4.9e-12 75.9 238 28.2
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 7.3e-08 62.0 39 71.8
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 3.6e-07 59.7 168 30.4
CDE05G1628 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 8.1e-07 58.5 69 47.8


User provided reference genes

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