Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 1.3e-211 739.6 404 100.0
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 8.4e-102 374.8 306 72.9
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 6.3e-97 358.6 304 73.4
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 1.1e-90 337.8 291 71.1
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 3.3e-90 336.3 290 67.6
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 4.3e-90 335.9 287 72.5
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 5.7e-90 335.5 295 72.2
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 9.7e-90 334.7 299 69.2
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 9.7e-90 334.7 290 67.2
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.7e-89 334.0 296 68.2
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 3.7e-89 332.8 299 68.2
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.1e-88 331.3 291 67.0
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 4.1e-88 329.3 296 72.3
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 4.5e-87 325.9 300 71.3
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 1.3e-86 324.3 304 64.1
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.2e-86 323.6 292 68.5
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 3.8e-86 322.8 288 68.8
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 6.5e-86 322.0 300 65.0
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 8.5e-86 321.6 294 68.4
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 1.4e-85 320.9 296 66.9
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.9e-85 320.5 296 67.2
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.9e-85 320.5 296 67.2
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 7.2e-85 318.5 293 71.3
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 7.2e-85 318.5 291 69.8
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 2.1e-84 317.0 304 68.1
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 4.7e-84 315.8 304 66.4
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.0e-83 314.7 294 66.3
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 3.9e-83 312.8 291 68.0
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 8.8e-83 311.6 315 63.5
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 1.1e-82 311.2 293 70.6
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.5e-82 310.8 283 70.0
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 3.3e-82 309.7 295 65.8
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 7.4e-82 308.5 282 70.2
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 1.3e-81 307.8 290 68.3
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 2.2e-81 307.0 292 65.4
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 2.8e-81 306.6 298 67.4
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 4.8e-81 305.8 284 61.3
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 8.2e-81 305.1 300 68.3
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 8.2e-81 305.1 290 69.3
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 1.8e-80 303.9 289 65.7
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.8e-80 303.9 290 70.7
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 4.1e-80 302.8 285 69.5
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 5.3e-80 302.4 288 71.9
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 5.3e-80 302.4 298 65.1
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 1.5e-79 300.8 290 63.4
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 2.0e-79 300.4 299 69.6
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 1.0e-78 298.1 301 66.1
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 1.7e-78 297.4 287 68.3
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 2.2e-78 297.0 288 65.6
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 2.9e-78 296.6 292 67.8
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.0e-78 295.8 318 65.1
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 8.5e-78 295.0 295 68.5
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 8.5e-78 295.0 315 63.5
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 1.1e-77 294.7 305 63.0
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.9e-77 293.9 289 67.1
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.5e-77 293.5 318 64.8
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 3.2e-77 293.1 303 66.0
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 5.5e-77 292.4 293 63.8
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 7.2e-77 292.0 286 64.7
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 1.2e-76 291.2 297 64.3
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 2.1e-76 290.4 294 65.6
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.0e-75 288.1 298 67.8
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 1.5e-74 284.3 309 65.0
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 1.5e-74 284.3 292 67.1
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 3.3e-74 283.1 313 57.8
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 5.7e-74 282.3 304 61.2
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 1.7e-73 280.8 285 61.8
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 2.2e-73 280.4 290 65.2
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 1.1e-72 278.1 289 67.5
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 1.8e-72 277.3 318 58.2
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 2.4e-72 276.9 297 61.3
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 3.1e-72 276.6 306 62.4
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 9.1e-72 275.0 301 65.4
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 1.2e-71 274.6 297 63.0
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 1.2e-71 274.6 297 63.0
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 3.5e-71 273.1 306 60.1
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 4.5e-71 272.7 310 64.2
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 4.5e-71 272.7 308 58.1
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 1.3e-70 271.2 300 63.3
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 3.8e-70 269.6 300 64.7
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 6.5e-70 268.9 294 62.6
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 8.5e-70 268.5 291 60.1
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 1.5e-69 267.7 299 63.9
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 1.5e-69 267.7 302 62.3
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 1.9e-69 267.3 302 61.9
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 4.2e-69 266.2 307 61.6
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 5.5e-69 265.8 296 63.5
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 7.2e-69 265.4 306 63.4
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 7.2e-69 265.4 297 59.9
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 9.4e-69 265.0 299 63.5
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 2.1e-68 263.8 300 63.3
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 2.7e-68 263.5 326 58.6
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 2.7e-68 263.5 296 62.8
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 2.7e-68 263.5 290 60.7
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 4.7e-68 262.7 308 61.4
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 4.7e-68 262.7 293 59.4
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 4.7e-68 262.7 293 59.4
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 8.0e-68 261.9 326 58.3
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 8.0e-68 261.9 297 62.0
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 2.3e-67 260.4 293 62.1
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 8.8e-67 258.5 291 63.6
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 2.0e-66 257.3 298 59.1
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 2.0e-66 257.3 298 59.1
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 2.0e-66 257.3 299 59.5
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 5.7e-66 255.8 305 61.6
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 5.7e-66 255.8 296 59.8
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 3.7e-65 253.1 300 61.7
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 1.1e-64 251.5 288 60.4
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 1.8e-64 250.8 346 55.8
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.4e-64 250.4 218 72.5
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 2.4e-64 250.4 288 61.1
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 7.0e-64 248.8 296 58.4
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 3.5e-63 246.5 349 53.9
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 5.9e-63 245.7 298 55.7
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 5.9e-63 245.7 290 60.0
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 1.0e-62 245.0 291 59.5
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 1.7e-62 244.2 297 63.0
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 2.2e-62 243.8 304 59.9
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 6.5e-62 242.3 311 60.5
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 1.9e-61 240.7 299 57.5
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 7.2e-61 238.8 289 60.9
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 1.6e-60 237.7 306 59.5
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 1.6e-60 237.7 263 58.9
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 2.1e-60 237.3 300 56.7
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 2.3e-59 233.8 232 62.1
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 4.0e-59 233.0 346 55.5
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 5.2e-59 232.6 310 58.7
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 5.7e-58 229.2 287 56.8
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 5.7e-58 229.2 300 59.3
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 7.5e-58 228.8 299 57.2
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 1.3e-57 228.0 289 56.7
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 1.3e-57 228.0 391 48.1
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 1.3e-57 228.0 290 58.3
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 1.7e-57 227.6 299 56.5
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 1.1e-56 224.9 314 54.8
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 1.4e-56 224.6 290 54.5
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.7e-55 220.3 298 56.4
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 5.9e-55 219.2 217 72.8
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 8.6e-54 215.3 306 52.9
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 1.9e-53 214.2 286 56.6
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.6e-52 211.1 311 56.3
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 4.4e-50 203.0 288 54.2
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 1.3e-49 201.4 289 49.8
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 2.2e-49 200.7 211 68.2
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 7.3e-45 185.7 212 61.8
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 5.2e-43 179.5 225 55.6
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 2.2e-41 174.1 277 49.5
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 4.1e-40 169.9 132 64.4
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 4.6e-39 166.4 196 60.2
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 1.0e-38 165.2 233 57.9
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 3.9e-38 163.3 244 56.6
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 1.1e-37 161.8 293 47.4
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 1.1e-35 155.2 100 73.0
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 1.2e-31 141.7 328 46.3
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 2.1e-31 141.0 165 62.4
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 4.6e-31 139.8 79 88.6
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 3.9e-30 136.7 99 67.7
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 3.9e-30 136.7 317 47.9
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 4.7e-28 129.8 80 81.2
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 3.1e-27 127.1 200 62.0
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 3.1e-27 127.1 328 43.9
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.9e-25 120.6 244 46.3
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 2.9e-25 120.6 204 47.1
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 4.9e-25 119.8 99 68.7
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 7.1e-24 115.9 308 43.2
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 8.6e-22 109.0 75 73.3
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 5.6e-21 106.3 83 72.3
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 8.1e-20 102.4 80 73.8
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 5.8e-18 96.3 68 70.6
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 9.9e-18 95.5 96 54.2
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 6.4e-17 92.8 167 52.1
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.4e-16 91.7 63 73.0
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 3.5e-15 87.0 109 46.8
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.1e-13 82.0 108 53.7
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.3e-13 80.5 47 83.0
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 1.2e-10 72.0 298 38.3
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 4.4e-10 70.1 80 57.5
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.9e-09 67.4 138 50.0
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 1.4e-08 65.1 298 38.6
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 2.1e-07 61.2 78 51.3
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 2.1e-07 61.2 259 44.4


User provided reference genes

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