Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 8.2e-137 490.3 240 100.0
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 3.4e-98 362.1 240 76.7
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 2.7e-87 325.9 240 68.3
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 1.2e-79 300.4 233 63.5
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 1.5e-77 293.5 237 62.9
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 5.6e-77 291.6 224 65.6
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 9.5e-77 290.8 234 62.0
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 2.8e-76 289.3 237 61.6
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 4.7e-76 288.5 233 61.4
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 1.8e-75 286.6 236 60.6
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 1.5e-74 283.5 236 59.7
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 3.4e-74 282.3 236 59.7
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 7.5e-74 281.2 236 58.5
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 9.8e-74 280.8 236 59.7
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 2.2e-73 279.6 237 60.3
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 3.7e-73 278.9 238 60.1
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 3.7e-73 278.9 236 59.7
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 8.3e-73 277.7 236 59.3
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.1e-72 277.3 236 58.9
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 1.1e-72 277.3 234 59.4
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 1.1e-72 277.3 236 59.3
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 1.4e-72 276.9 229 58.5
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 1.4e-72 276.9 236 57.2
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 1.9e-72 276.6 236 58.5
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 1.9e-72 276.6 241 57.3
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 1.9e-72 276.6 236 57.2
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 2.4e-72 276.2 236 58.9
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 2.4e-72 276.2 236 57.2
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 2.4e-72 276.2 236 59.7
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 3.2e-72 275.8 238 58.8
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 4.1e-72 275.4 234 59.0
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 4.1e-72 275.4 234 58.5
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 7.1e-72 274.6 228 59.2
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 7.1e-72 274.6 227 59.5
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 1.2e-71 273.9 234 58.5
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 3.5e-71 272.3 236 58.1
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 3.5e-71 272.3 228 58.8
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 4.6e-71 271.9 230 57.4
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 6.0e-71 271.6 236 57.6
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 7.8e-71 271.2 228 59.2
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 7.8e-71 271.2 234 58.1
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 1.0e-70 270.8 238 58.0
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 1.3e-70 270.4 231 57.6
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 1.7e-70 270.0 241 56.4
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 1.7e-70 270.0 234 58.1
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 1.7e-70 270.0 236 57.2
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 2.3e-70 269.6 234 57.7
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 3.9e-70 268.9 236 57.6
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 5.1e-70 268.5 233 58.4
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 5.1e-70 268.5 234 57.3
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 5.1e-70 268.5 230 57.4
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 5.1e-70 268.5 230 57.4
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 6.6e-70 268.1 233 58.8
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 8.6e-70 267.7 239 56.9
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 1.5e-69 266.9 235 57.4
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 1.9e-69 266.5 241 56.8
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 1.9e-69 266.5 234 56.8
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 2.5e-69 266.2 230 56.5
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 3.3e-69 265.8 231 55.4
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 3.3e-69 265.8 236 56.4
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 9.5e-69 264.2 228 57.5
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 9.5e-69 264.2 236 55.5
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 9.5e-69 264.2 234 57.3
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 9.5e-69 264.2 238 55.5
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 1.6e-68 263.5 227 57.7
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 1.6e-68 263.5 227 57.3
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 1.6e-68 263.5 234 55.6
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 2.8e-68 262.7 232 55.6
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.8e-68 262.7 232 55.6
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 2.8e-68 262.7 234 55.6
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 2.8e-68 262.7 234 56.4
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.1e-67 260.8 229 56.3
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 1.4e-67 260.4 236 55.1
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.4e-67 260.4 229 55.9
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 1.8e-67 260.0 229 56.3
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 2.3e-67 259.6 229 56.8
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 2.3e-67 259.6 227 56.8
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 2.3e-67 259.6 227 56.8
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 4.0e-67 258.8 229 55.0
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 5.2e-67 258.5 239 54.0
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 5.2e-67 258.5 227 55.5
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 5.2e-67 258.5 230 55.7
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 5.2e-67 258.5 238 53.8
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 5.2e-67 258.5 229 56.3
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 6.8e-67 258.1 229 55.9
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 8.9e-67 257.7 239 54.0
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 8.9e-67 257.7 229 55.9
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 3.4e-66 255.8 235 54.5
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 5.8e-66 255.0 234 51.7
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 5.8e-66 255.0 234 54.3
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 7.6e-66 254.6 234 56.4
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 7.6e-66 254.6 231 55.0
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 9.9e-66 254.2 234 54.7
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 1.3e-65 253.8 233 54.9
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 2.2e-65 253.1 238 54.6
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 3.8e-65 252.3 229 53.7
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 4.9e-65 251.9 238 53.8
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 4.9e-65 251.9 231 55.4
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 6.4e-65 251.5 238 54.2
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 8.4e-65 251.1 233 53.6
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 1.1e-64 250.8 238 53.4
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 1.4e-64 250.4 238 54.2
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 1.9e-64 250.0 238 53.4
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 1.9e-64 250.0 225 55.1
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 7.1e-64 248.1 223 55.2
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 9.2e-64 247.7 236 54.2
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 9.2e-64 247.7 235 57.0
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 1.2e-63 247.3 238 51.3
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 1.6e-63 246.9 215 58.1
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 1.3e-62 243.8 236 51.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.7e-62 243.4 236 53.0
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.7e-62 243.4 236 53.0
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 2.3e-62 243.0 233 50.2
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 2.3e-62 243.0 227 56.8
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 3.0e-62 242.7 235 52.3
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 1.1e-61 240.7 238 52.5
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 1.1e-61 240.7 236 51.3
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 1.5e-61 240.4 236 50.0
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 1.5e-61 240.4 235 51.5
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 4.3e-61 238.8 225 54.7
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 4.3e-61 238.8 225 54.7
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 1.8e-59 233.4 239 49.4
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 6.9e-59 231.5 236 48.7
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 5.8e-58 228.4 225 51.1
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 2.2e-57 226.5 236 49.2
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 4.9e-57 225.3 220 54.1
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 6.4e-57 224.9 218 54.1
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 2.1e-55 219.9 230 49.1
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 4.6e-55 218.8 242 47.1
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 3.9e-54 215.7 236 46.6
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 7.3e-53 211.5 233 47.2
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 1.3e-52 210.7 228 47.4
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 2.9e-49 199.5 102 89.2
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 3.2e-48 196.1 229 43.7
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 1.0e-46 191.0 106 81.1
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 1.3e-46 190.7 225 42.7
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.1e-46 188.7 108 74.1
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 1.2e-42 177.6 101 77.2
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 2.0e-42 176.8 175 52.6
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 6.4e-41 171.8 101 75.2
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 1.1e-40 171.0 231 38.1
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 1.4e-40 170.6 107 72.0
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 9.3e-40 167.9 104 73.1
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 9.3e-40 167.9 108 69.4
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 9.3e-40 167.9 108 69.4
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 7.9e-39 164.9 177 49.7
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.8e-36 156.4 85 83.5
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 8.2e-36 154.8 231 37.7
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 1.3e-33 147.5 237 40.9
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 2.9e-33 146.4 227 37.4
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 1.1e-32 144.4 176 44.3
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 2.5e-29 133.3 236 35.6
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.9e-21 107.1 68 70.6
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 5.7e-21 105.5 76 67.1
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 7.4e-21 105.1 223 30.0
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 8.2e-20 101.7 205 35.6
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 2.0e-18 97.1 71 63.4
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 3.6e-15 86.3 67 56.7
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.0e-14 84.7 67 55.2
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 3.0e-14 83.2 124 40.3
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 2.0e-13 80.5 70 54.3
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 4.1e-11 72.8 45 75.6
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 1.5e-10 70.9 230 26.1
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.9e-09 66.6 48 68.8
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 6.5e-09 65.5 139 30.9


User provided reference genes

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