Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14446 Vaccinium macrocarpon HOM05D007207 ORTHO05D009041 5.3e-102 374.4 196 100.0
Actinidia20448 Actinidia chinensis HOM05D007207 ORTHO05D009041 1.4e-22 110.5 90 63.3
Rhsim01G0217900 Rhododendron simsii HOM05D007207 ORTHO05D009041 5.5e-22 108.6 128 50.0
Hma1.2p1_1030F.1_g249850 Hydrangea macrophylla HOM05D007207 ORTHO05D009041 6.0e-21 105.1 90 58.9
Cc01_g11290 Coffea canephora HOM05D007207 ORTHO05D009041 4.3e-19 99.0 63 74.6
Peaxi162Scf00686g00043 Petunia axillaris HOM05D007207 ORTHO05D009041 5.7e-19 98.6 104 50.0
Nn2g13070 Nelumbo nucifera HOM05D007207 ORTHO05D009041 7.4e-19 98.2 93 54.8
Dinv32761 Davidia involucrata HOM05D007207 ORTHO05D009041 9.7e-19 97.8 84 60.7
MSTRG.17815 Avicennia marina HOM05D007207 ORTHO05D009041 3.7e-18 95.9 88 53.4
Solyc06g016750.3 Solanum lycopersicum HOM05D007207 ORTHO05D009041 6.3e-18 95.1 100 46.0
Sopen06g007140 Solanum pennellii HOM05D007207 ORTHO05D009041 6.3e-18 95.1 100 46.0
CAN.G934.2 Capsicum annuum HOM05D007207 ORTHO05D009041 1.8e-17 93.6 104 47.1
MD03G1114400 Malus domestica HOM05D007207 ORTHO05D009041 1.8e-17 93.6 113 46.0
HanXRQChr01g0018341 Helianthus annuus HOM05D007207 ORTHO05D009041 2.4e-17 93.2 90 53.3
SalBow3G2981 Salvia bowleyana HOM05D007207 ORTHO05D009041 5.3e-17 92.0 113 46.0
CiPaw.13G111000 Carya illinoinensis HOM05D007207 ORTHO05D009041 9.0e-17 91.3 89 51.7
Lsat_1_v5_gn_1_65500 Lactuca sativa HOM05D007207 ORTHO05D009041 1.2e-16 90.9 158 39.9
CANSAT54G0517 Cannabis sativa HOM05D007207 ORTHO05D009041 3.4e-16 89.4 88 52.3
ECA248G1375 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.4e-16 89.4 85 55.3
Duzib170G0585 Durio zibethinus HOM05D007207 ORTHO05D009041 4.5e-16 89.0 89 50.6
Sed0024734 Sechium edule HOM05D007207 ORTHO05D009041 5.9e-16 88.6 153 38.6
TAR633G1504 Trochodendron aralioides HOM05D000656 ORTHO05D000871 1.7e-15 87.0 83 51.8
Gohir.A07G117400 Gossypium hirsutum HOM05D007207 ORTHO05D009041 2.2e-15 86.7 89 46.1
QL01p022653 Quercus lobata HOM05D007207 ORTHO05D009041 2.2e-15 86.7 89 50.6
Psat7g224520 Pisum sativum HOM05D007207 ORTHO05D009041 2.9e-15 86.3 83 51.8
Thecc.09G257600 Theobroma cacao HOM05D007207 ORTHO05D009041 5.0e-15 85.5 89 49.4
Gohir.D07G121800 Gossypium hirsutum HOM05D007207 ORTHO05D009041 8.5e-15 84.7 89 46.1
Gorai.001G131300 Gossypium raimondii HOM05D007207 ORTHO05D009041 8.5e-15 84.7 89 46.1
EL10Ac9g22498 Beta vulgaris HOM05D007207 ORTHO05D009041 1.1e-14 84.3 71 62.0
Duzib168G2405 Durio zibethinus HOM05D007207 ORTHO05D009041 1.1e-14 84.3 89 47.2
QL01p022696 Quercus lobata HOM05D007207 ORTHO05D009041 1.4e-14 84.0 89 49.4
VMungo1127G1112 Vigna mungo HOM05D007207 ORTHO05D009041 1.4e-14 84.0 83 49.4
Ca_05249_v3 Cicer arietinum L. HOM05D007207 ORTHO05D009041 3.2e-14 82.8 83 50.6
Sc06g0010040 Simmondsia chinensis HOM05D007207 ORTHO05D009041 3.2e-14 82.8 88 52.3
Ciclev10030232m.g Citrus clementina HOM05D007207 ORTHO05D009041 4.2e-14 82.4 88 43.2
Phvul.011G077500 Phaseolus vulgaris HOM05D007207 ORTHO05D009041 4.2e-14 82.4 83 49.4
FvH4_3g32640 Fragaria vesca HOM05D007207 ORTHO05D009041 5.5e-14 82.0 83 49.4
FAN11G2184 Fragaria x ananassa HOM05D007207 ORTHO05D009041 5.5e-14 82.0 83 49.4
Manes.04G022800 Manihot esculenta HOM05D007207 ORTHO05D009041 5.5e-14 82.0 88 46.6
Potri.009G012300 Populus trichocarpa HOM05D007207 ORTHO05D009041 9.4e-14 81.3 89 48.3
Hund08142 Selenicereus undatus HOM05D007207 ORTHO05D009041 1.6e-13 80.5 86 48.8
Medtr4g059710 Medicago truncatula HOM05D007207 ORTHO05D009041 2.1e-13 80.1 83 49.4
Lj3g0024872 Lotus japonicus HOM05D007207 ORTHO05D009041 3.6e-13 79.3 85 48.2
TWI75G1762 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 3.6e-13 79.3 88 51.1
PSO339G6489 Papaver somniferum HOM05D007207 ORTHO05D009041 4.6e-13 79.0 90 47.8
FAN21G0351 Fragaria x ananassa HOM05D007207 ORTHO05D009041 6.1e-13 78.6 83 47.0
RcHm_v2.0_Chr5g0059711 Rosa chinensis HOM05D007207 ORTHO05D009041 7.9e-13 78.2 83 47.0
GSVIVG01025169001 Vitis vinifera HOM05D007207 ORTHO05D009041 7.9e-13 78.2 85 49.4
TPR.G17530 Trifolium pratense HOM05D007207 ORTHO05D009041 1.0e-12 77.8 86 47.7
PSO063G2032 Papaver somniferum HOM05D007207 ORTHO05D009041 1.4e-12 77.4 90 46.7
AUR62039621 Chenopodium quinoa HOM05D007207 ORTHO05D009041 1.8e-12 77.0 95 46.3
THA.LOC104815749 Tarenaya hassleriana HOM05D007207 ORTHO05D009041 2.3e-12 76.6 89 41.6
Glyma.12G069100 Glycine max HOM05D007207 ORTHO05D009041 3.0e-12 76.3 85 47.1
FAN25G0070 Fragaria x ananassa HOM05D007207 ORTHO05D009041 3.9e-12 75.9 148 36.5
MBI11_g23474_MAGBIO Magnolia biondii HOM05D007207 ORTHO05D009041 5.1e-12 75.5 102 41.2
BraA06t23713Z Brassica rapa HOM05D007207 ORTHO05D009041 6.7e-12 75.1 117 38.5
unitig_699.g19196 Utricularia gibba HOM05D007207 ORTHO05D009041 6.7e-12 75.1 63 60.3
A06p05070 Brassica napus HOM05D007207 ORTHO05D009041 8.8e-12 74.7 117 37.6
TWI79G0777 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 1.1e-11 74.3 170 34.1
AUR62024995 Chenopodium quinoa HOM05D007207 ORTHO05D009041 1.5e-11 73.9 63 61.9
Thhalv10008787m.g Eutrema salsugineum HOM05D007207 ORTHO05D009041 1.5e-11 73.9 93 44.1
BcaC05g24714 Brassica carinata HOM05D007207 ORTHO05D009041 2.5e-11 73.2 119 37.8
C05p06030 Brassica napus HOM05D007207 ORTHO05D009041 2.5e-11 73.2 119 37.8
BolC5t29362H Brassica oleracea HOM05D007207 ORTHO05D009041 2.5e-11 73.2 119 37.8
Actinidia03739 Actinidia chinensis HOM05D007207 ORTHO05D009041 5.7e-11 72.0 69 52.2
Ah.01g015070 Amaranthus hybridus HOM05D007207 ORTHO05D009041 5.7e-11 72.0 102 42.2
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 7.4e-11 71.6 93 43.0
PGR102G0648 Punica granatum HOM05D007207 ORTHO05D009041 9.7e-11 71.2 69 52.2
TAR636G0495 Trochodendron aralioides HOM05D007207 ORTHO05D009041 9.7e-11 71.2 90 46.7
A09p66080 Brassica napus HOM05D007207 ORTHO05D009041 1.3e-10 70.9 143 35.7
BcaC07g42510 Brassica carinata HOM05D007207 ORTHO05D009041 1.7e-10 70.5 87 43.7
SGA_v2.0_scaffold80G25756 Striga asiatica HOM05D007207 ORTHO05D009041 1.7e-10 70.5 148 32.4
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 2.2e-10 70.1 89 41.6
arahy.Tifrunner.gnm1.ann1.F7CTDZ Arachis hypogaea HOM05D007207 ORTHO05D009041 2.8e-10 69.7 81 43.2
BraA09t41946Z Brassica rapa HOM05D007207 ORTHO05D009041 2.8e-10 69.7 153 34.6
CARHR007760 Cardamine hirsuta HOM05D007207 ORTHO05D009041 3.7e-10 69.3 87 43.7
CDE06G2547 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 3.7e-10 69.3 60 51.7
BcaB02g06697 Brassica carinata HOM05D007207 ORTHO05D009041 1.1e-09 67.8 108 37.0
Lalb_Chr01g0004241 Lupinus albus HOM05D007207 ORTHO05D009041 1.1e-09 67.8 87 43.7
Carub.0001s0733 Capsella rubella HOM05D007207 ORTHO05D009041 1.4e-09 67.4 175 26.9
CDE07G0349 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 1.8e-09 67.0 60 48.3
Atru.chr3.3663 Acer truncatum HOM05D007207 ORTHO05D009041 3.1e-09 66.2 115 36.5
arahy.Tifrunner.gnm1.ann1.KZS5BJ Arachis hypogaea HOM05D007207 ORTHO05D009041 5.3e-09 65.5 167 32.3
MELO3C025765.2 Cucumis melo HOM05D007207 ORTHO05D009041 9.1e-09 64.7 139 32.4
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 1.5e-08 63.9 87 40.2
HPP92_012669 Vanilla planifolia HOM05D007207 ORTHO05D009041 2.0e-08 63.5 68 50.0
C08p50230 Brassica napus HOM05D007207 ORTHO05D009041 3.4e-08 62.8 153 32.0
BolC8t52552H Brassica oleracea HOM05D007207 ORTHO05D009041 3.4e-08 62.8 153 32.0
Aa31LG2G9300 Aethionema arabicum HOM05D007207 ORTHO05D009041 5.9e-08 62.0 141 32.6
ClCG02G021080 Citrullus lanatus HOM05D007207 ORTHO05D009041 1.7e-07 60.5 151 29.8
Os03g0852300 Oryza sativa ssp. japonica HOM05D007207 ORTHO05D009041 3.8e-07 59.3 81 37.0
Glyma.11G148000 Glycine max HOM05D007207 ORTHO05D009041 1.1e-06 57.8 89 41.6
SEGI_13018 Sequoiadendron giganteum HOM05D007207 ORTHO05D009041 9.4e-06 54.7 105 33.3


User provided reference genes

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