Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 1.6e-75 286.2 159 100.0
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 1.1e-60 236.9 159 81.1
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 4.0e-55 218.4 158 75.9
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 5.2e-55 218.0 157 75.2
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 2.0e-51 206.1 158 74.1
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 6.2e-48 194.5 157 69.4
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 3.4e-46 188.7 157 62.4
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 5.8e-46 188.0 157 68.2
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 5.8e-46 188.0 157 63.7
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 7.5e-46 187.6 158 62.7
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 9.8e-46 187.2 157 64.3
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 2.2e-45 186.0 157 61.8
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 2.2e-45 186.0 157 63.1
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 2.2e-45 186.0 157 63.1
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 6.4e-45 184.5 158 69.6
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 1.6e-43 179.9 158 60.8
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 4.6e-43 178.3 156 60.9
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.0e-42 177.2 139 65.5
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.3e-42 176.0 138 65.9
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 3.9e-42 175.3 149 61.7
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 6.6e-42 174.5 159 59.7
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 1.1e-41 173.7 130 69.2
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.1e-41 173.7 157 58.6
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 1.5e-41 173.3 159 63.5
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 1.5e-41 173.3 158 65.2
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 1.9e-41 172.9 197 52.3
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 4.3e-41 171.8 132 68.2
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 7.3e-41 171.0 157 63.1
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 7.3e-41 171.0 157 63.7
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 1.2e-40 170.2 160 61.2
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 2.8e-40 169.1 157 64.3
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.4e-39 166.8 158 62.7
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 5.2e-39 164.9 156 64.1
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 8.9e-39 164.1 139 66.2
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.2e-38 163.7 159 61.0
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.2e-38 163.7 159 61.0
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 2.6e-38 162.5 157 58.6
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 4.4e-38 161.8 152 61.8
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.3e-37 160.2 139 62.6
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.3e-37 160.2 129 64.3
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 2.2e-37 159.5 99 87.9
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 2.9e-37 159.1 128 64.8
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.9e-37 159.1 129 63.6
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 2.9e-37 159.1 159 54.1
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 2.9e-37 159.1 158 62.7
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.7e-37 158.7 129 63.6
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 3.7e-37 158.7 130 63.8
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 8.3e-37 157.5 159 61.0
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 1.1e-36 157.1 158 58.2
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 1.1e-36 157.1 129 64.3
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 1.9e-36 156.4 187 48.1
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 2.7e-35 152.5 162 54.3
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 6.0e-35 151.4 157 52.2
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 1.0e-34 150.6 160 60.6
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 1.3e-34 150.2 132 59.8
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.5e-33 146.7 152 56.6
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 1.9e-33 146.4 130 59.2
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 2.5e-33 146.0 140 55.7
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 2.5e-33 146.0 140 55.7
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 2.5e-33 146.0 158 53.2
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 3.3e-33 145.6 140 55.7
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 3.3e-33 145.6 158 57.6
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 5.6e-33 144.8 142 55.6
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 9.5e-33 144.1 140 55.0
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.2e-32 143.7 140 55.0
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 2.1e-32 142.9 140 54.3
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 6.2e-32 141.4 159 53.5
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 1.8e-31 139.8 142 54.2
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 5.2e-31 138.3 125 59.2
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 6.8e-31 137.9 151 49.7
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.5e-30 136.7 131 56.5
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 1.5e-30 136.7 159 52.8
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 2.6e-30 136.0 116 61.2
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 5.8e-30 134.8 155 51.0
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 1.3e-29 133.7 153 51.0
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 2.9e-29 132.5 156 48.1
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 4.9e-29 131.7 159 47.8
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 4.1e-28 128.6 163 48.5
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 7.1e-28 127.9 134 59.0
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.6e-27 126.7 156 48.1
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 2.1e-27 126.3 164 46.3
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 6.0e-27 124.8 133 60.2
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 1.3e-26 123.6 161 47.2
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 5.1e-26 121.7 161 43.5
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 1.5e-25 120.2 115 58.3
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 4.3e-25 118.6 127 52.8
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 7.3e-25 117.9 150 46.7
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 1.2e-24 117.1 158 47.5
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.6e-24 116.7 137 52.6
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 1.6e-24 116.7 161 45.3
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 2.1e-24 116.3 137 52.6
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 2.1e-24 116.3 150 46.0
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 4.7e-24 115.2 134 46.3
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 4.7e-24 115.2 134 46.3
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 2.4e-23 112.8 151 43.7
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 8.9e-23 110.9 132 48.5
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.2e-22 110.5 100 62.0
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 2.0e-22 109.8 99 61.6
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 3.4e-22 109.0 150 48.7
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.3e-21 107.1 90 68.9
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 2.2e-21 106.3 139 43.2
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 9.3e-20 100.9 122 45.9
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 2.7e-19 99.4 100 60.0
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 3.3e-17 92.4 87 58.6
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.6e-16 90.1 114 45.6
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.6e-16 90.1 171 38.6
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 2.1e-16 89.7 91 51.6
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 2.1e-16 89.7 106 48.1
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 1.4e-15 87.0 84 60.7
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 3.1e-15 85.9 106 47.2
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 5.3e-15 85.1 116 44.8
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 5.3e-15 85.1 82 62.2
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.2e-14 84.0 76 57.9
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.2e-14 84.0 83 59.0
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.5e-14 83.6 74 59.5
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 2.0e-14 83.2 105 51.4
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 3.4e-14 82.4 74 63.5
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 2.2e-13 79.7 121 43.0
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 3.8e-13 79.0 113 48.7
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 4.9e-13 78.6 114 41.2
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 8.4e-13 77.8 81 60.5
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 1.1e-12 77.4 74 60.8
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 5.4e-12 75.1 79 51.9
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 9.3e-12 74.3 144 35.4
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 2.7e-11 72.8 121 40.5
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 3.5e-11 72.4 79 58.2
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 4.6e-11 72.0 88 48.9
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 1.3e-10 70.5 129 44.2
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 4.3e-09 65.5 107 40.2
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 1.1e-07 60.8 91 45.1
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 2.4e-07 59.7 68 61.8


User provided reference genes

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