Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 1.1e-37 159.5 82 100.0
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 6.4e-33 143.7 82 89.0
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 2.9e-25 118.2 82 70.7
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.9e-24 115.5 86 72.1
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 3.2e-24 114.8 83 73.5
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 2.1e-23 112.1 86 66.3
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 4.6e-23 110.9 86 66.3
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 6.0e-23 110.5 86 67.4
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 7.9e-23 110.2 85 70.6
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 1.0e-22 109.8 82 68.3
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 1.8e-22 109.0 82 65.9
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 1.8e-22 109.0 82 68.3
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 3.9e-22 107.8 82 67.1
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 2.5e-21 105.1 86 64.0
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 3.3e-21 104.8 79 67.1
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 1.3e-20 102.8 81 65.4
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 1.3e-20 102.8 82 63.4
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 1.3e-20 102.8 86 65.1
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 1.6e-20 102.4 82 62.2
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 2.1e-20 102.1 86 61.6
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.1e-20 102.1 86 64.0
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 2.8e-20 101.7 87 59.8
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 2.8e-20 101.7 82 64.6
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 3.7e-20 101.3 91 59.3
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.7e-20 101.3 86 61.6
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 4.8e-20 100.9 86 62.8
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 8.1e-20 100.1 83 61.4
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 8.1e-20 100.1 82 63.4
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 1.1e-19 99.8 87 58.6
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 61.6
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 62.8
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 61.6
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.4e-19 99.4 86 61.6
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.4e-19 99.4 86 62.8
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 1.4e-19 99.4 86 61.6
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.8e-19 99.0 82 61.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.8e-19 99.0 86 61.6
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 2.4e-19 98.6 86 59.3
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 3.1e-19 98.2 86 58.1
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 4.0e-19 97.8 84 63.1
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 4.0e-19 97.8 86 59.3
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 5.3e-19 97.4 85 58.8
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 6.9e-19 97.1 80 61.2
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 9.0e-19 96.7 86 59.3
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 9.0e-19 96.7 86 59.3
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 61.6
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 2.0e-18 95.5 86 59.3
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 2.0e-18 95.5 83 60.2
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 2.6e-18 95.1 87 57.5
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 2.6e-18 95.1 87 57.5
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 2.6e-18 95.1 87 57.5
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 2.6e-18 95.1 87 57.5
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 2.6e-18 95.1 87 57.5
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 2.6e-18 95.1 82 61.0
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 3.4e-18 94.7 86 59.3
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 7.6e-18 93.6 74 62.2
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 1.3e-17 92.8 84 60.7
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 1.7e-17 92.4 86 57.0
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.7e-17 92.4 87 57.5
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.7e-17 92.4 80 60.0
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.2e-17 92.0 82 61.0
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.9e-17 91.7 82 61.0
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.9e-17 91.7 82 57.3
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 3.8e-17 91.3 86 57.0
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 4.9e-17 90.9 86 58.1
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 4.9e-17 90.9 86 58.1
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 8.4e-17 90.1 86 52.3
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 8.4e-17 90.1 80 57.5
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 8.4e-17 90.1 78 59.0
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 1.4e-16 89.4 86 58.1
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.4e-16 89.4 84 58.3
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 1.9e-16 89.0 86 57.0
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.9e-16 89.0 86 55.8
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.9e-16 89.0 86 55.8
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 2.5e-16 88.6 87 55.2
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 3.2e-16 88.2 82 54.9
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 3.2e-16 88.2 86 53.5
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 3.2e-16 88.2 80 58.8
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.2e-16 87.8 82 59.8
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 4.2e-16 87.8 87 55.2
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 5.5e-16 87.4 85 56.5
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 7.1e-16 87.0 83 51.8
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 9.3e-16 86.7 88 52.3
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 1.2e-15 86.3 77 57.1
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.6e-15 85.9 86 54.7
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 2.7e-15 85.1 86 51.2
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 2.7e-15 85.1 86 52.3
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 2.7e-15 85.1 86 52.3
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 3.5e-15 84.7 86 52.3
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 1.0e-14 83.2 87 51.7
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 1.0e-14 83.2 84 54.8
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 1.8e-14 82.4 85 50.6
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 6.7e-14 80.5 85 48.2
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.9e-13 79.0 75 60.0
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.7e-13 77.4 79 50.6
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 7.4e-13 77.0 82 47.6
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 7.4e-13 77.0 84 51.2
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.6e-12 75.9 82 47.6
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 2.1e-12 75.5 84 50.0
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 8.2e-12 73.6 82 48.8
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 3.1e-11 71.6 65 53.8
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 2.6e-10 68.6 174 31.0
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 1.0e-09 66.6 89 43.8
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 1.9e-08 62.4 56 66.1
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 5.5e-08 60.8 84 47.6
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.6e-07 59.3 49 59.2
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 2.7e-07 58.5 59 52.5
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 6.1e-07 57.4 92 42.4
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 1.0e-06 56.6 91 38.5
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.3e-06 55.5 55 54.5
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 3.0e-06 55.1 42 57.1


User provided reference genes

Program Settings