Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 1.7e-48 195.7 98 100.0
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 6.9e-42 173.7 109 82.6
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 1.2e-33 146.4 89 79.8
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 4.5e-25 117.9 84 73.8
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 7.7e-25 117.1 77 79.2
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 2.9e-24 115.2 77 76.6
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 1.6e-22 109.4 77 71.4
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.1e-22 109.0 77 71.4
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.1e-22 109.0 77 71.4
CSS0045444 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 3.6e-22 108.2 77 68.8
CSS0003656 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.8e-21 105.9 77 67.5
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 1.5e-20 102.8 76 72.4
CiPaw.02G003300 Carya illinoinensis HOM05D007513 ORTHO05D008148 4.4e-20 101.3 82 64.6
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 1.3e-19 99.8 75 68.0
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 1.3e-19 99.8 68 72.1
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 2.2e-19 99.0 76 67.1
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 8.2e-19 97.1 75 66.7
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 4.1e-18 94.7 67 67.2
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 7.0e-18 94.0 77 62.3
MD15G1295400 Malus domestica HOM05D007513 ORTHO05D008148 7.0e-18 94.0 79 63.3
Eucgr.A01208 Eucalyptus grandis HOM05D007513 ORTHO05D008148 9.1e-18 93.6 79 64.6
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 9.1e-18 93.6 59 76.3
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 1.2e-17 93.2 77 62.3
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 2.0e-17 92.4 77 62.3
Ciclev10023109m.g Citrus clementina HOM05D007513 ORTHO05D008148 4.5e-17 91.3 74 66.2
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 7.7e-17 90.5 90 51.1
Cc04_g16170 Coffea canephora HOM05D007513 ORTHO05D008148 1.0e-16 90.1 83 56.6
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 1.3e-16 89.7 77 61.0
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 1.3e-16 89.7 78 59.0
MD02G1183800 Malus domestica HOM05D007513 ORTHO05D008148 1.7e-16 89.4 88 60.2
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 2.2e-16 89.0 74 62.2
SalBow6G0964 Salvia bowleyana HOM05D007513 ORTHO05D008148 2.2e-16 89.0 63 65.1
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 2.2e-16 89.0 75 58.7
Atru.chr3.153 Acer truncatum HOM05D007513 ORTHO05D008148 3.8e-16 88.2 77 58.4
Atru.chr3.182 Acer truncatum HOM05D007513 ORTHO05D008148 3.8e-16 88.2 74 62.2
Duzib264G1124 Durio zibethinus HOM05D007513 ORTHO05D008148 3.8e-16 88.2 59 71.2
Thecc.01G071100 Theobroma cacao HOM05D007513 ORTHO05D008148 8.5e-16 87.0 98 50.0
Sc16g0003000 Simmondsia chinensis HOM05D007513 ORTHO05D008148 1.1e-15 86.7 77 59.7
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 1.5e-15 86.3 90 48.9
Gohir.D03G027900 Gossypium hirsutum HOM05D007513 ORTHO05D008148 1.9e-15 85.9 64 64.1
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 1.9e-15 85.9 65 66.2
Rhsim01G0211300 Rhododendron simsii HOM05D007513 ORTHO05D008148 2.5e-15 85.5 82 56.1
ECA233G3995 Erigeron canadensis HOM05D007513 ORTHO05D008148 3.2e-15 85.1 83 54.2
MELO3C030975.2 Cucumis melo HOM05D007513 ORTHO05D008148 4.2e-15 84.7 67 67.2
Aqoxy7G03437 Aquilegia oxysepala HOM05D007513 ORTHO05D008148 7.2e-15 84.0 79 58.2
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 9.4e-15 83.6 74 58.1
SGA_v2.0_scaffold486G52374 Striga asiatica HOM05D007513 ORTHO05D008148 2.1e-14 82.4 77 53.2
CDE07G2080 Ceratophyllum demersum HOM05D007513 ORTHO05D008148 3.6e-14 81.6 73 56.2
AUR62016920 Chenopodium quinoa HOM05D007513 ORTHO05D008148 1.0e-13 80.1 75 58.7
Prupe.6G222400 Prunus persica HOM05D007513 ORTHO05D008148 1.0e-13 80.1 57 70.2
DCAR_017173 Daucus carota HOM05D007513 ORTHO05D008148 1.4e-13 79.7 62 66.1
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 1.4e-13 79.7 74 55.4
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 4.0e-13 78.2 96 47.9
Nitab4.5_0001417g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 4.0e-13 78.2 66 59.1
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 5.2e-13 77.8 96 47.9
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 5.2e-13 77.8 61 60.7
DCAR_013160 Daucus carota HOM05D007513 ORTHO05D008148 5.2e-13 77.8 78 57.7
Nitab4.5_0000714g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 5.2e-13 77.8 77 53.2
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 6.8e-13 77.4 75 52.0
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 8.8e-13 77.0 74 52.7
VMungo1080G1633 Vigna mungo HOM05D007513 ORTHO05D008148 8.8e-13 77.0 80 47.5
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 1.2e-12 76.6 56 62.5
PGR102G1378 Punica granatum HOM05D007513 ORTHO05D008148 1.5e-12 76.3 73 52.1
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 2.0e-12 75.9 74 51.4
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 2.6e-12 75.5 74 51.4
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 3.4e-12 75.1 80 46.2
Ah.14g088990 Amaranthus hybridus HOM05D007513 ORTHO05D008148 9.8e-12 73.6 59 61.0
Solyc03g044080.4 Solanum lycopersicum HOM05D007513 ORTHO05D008148 1.3e-11 73.2 57 57.9
HPP92_010626 Vanilla planifolia HOM05D007513 ORTHO05D008148 2.8e-11 72.0 60 58.3
HPP92_010652 Vanilla planifolia HOM05D007513 ORTHO05D008148 2.8e-11 72.0 60 58.3
Thhalv10027185m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 4.8e-11 71.2 79 41.8
Cpa.g.sc6.31 Carica papaya HOM05D007513 ORTHO05D008148 8.3e-11 70.5 72 55.6
PGSC0003DMG400014868 Solanum tuberosum HOM05D007513 ORTHO05D008148 8.3e-11 70.5 57 57.9
BcaNung02934 Brassica carinata HOM05D014277 ORTHO05D008148 3.1e-10 68.6 84 41.7
Aa31LG6G14500 Aethionema arabicum HOM05D007513 ORTHO05D008148 4.1e-10 68.2 62 53.2
THA.LOC104807627 Tarenaya hassleriana HOM05D007513 ORTHO05D008148 7.0e-10 67.4 90 43.3
EL10Ac8g20627 Beta vulgaris HOM05D007513 ORTHO05D008148 9.1e-10 67.0 51 60.8
Gohir.A02G152300 Gossypium hirsutum HOM05D045493 ORTHO05D008148 1.2e-09 66.6 113 38.1
C07p62480 Brassica napus HOM05D014277 ORTHO05D008148 2.7e-09 65.5 84 39.3
COL.COLO4_11560 Corchorus olitorius HOM05D007513 ORTHO05D008148 2.7e-09 65.5 61 52.5
Peaxi162Scf00118g02024 Petunia axillaris HOM05D007513 ORTHO05D008148 4.5e-09 64.7 62 56.5
Carub.0004s0224 Capsella rubella HOM05D007513 ORTHO05D008148 7.7e-09 63.9 97 38.1
A08p22690 Brassica napus HOM05D007513 ORTHO05D008148 1.0e-08 63.5 61 50.8
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 1.0e-08 63.5 58 50.0
BcaB03g12338 Brassica carinata HOM05D007513 ORTHO05D008148 1.3e-08 63.2 60 51.7
BcaC01g00397 Brassica carinata HOM05D007513 ORTHO05D008148 1.3e-08 63.2 60 51.7
C03p79260 Brassica napus HOM05D007513 ORTHO05D008148 1.3e-08 63.2 60 51.7
BolC3t20170H Brassica oleracea HOM05D007513 ORTHO05D008148 1.3e-08 63.2 60 51.7
BraA08t34236Z Brassica rapa HOM05D007513 ORTHO05D008148 1.3e-08 63.2 60 51.7
BcaNung02064 Brassica carinata HOM05D014277 ORTHO05D008148 2.9e-08 62.0 84 36.9
Thhalv10000379m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 2.9e-08 62.0 64 50.0
Lalb_Chr24g0403261 Lupinus albus HOM05D007513 ORTHO05D008148 3.8e-08 61.6 58 48.3
TPR.G16351 Trifolium pratense HOM05D007513 ORTHO05D008148 3.8e-08 61.6 112 34.8
PSO170G3772 Papaver somniferum HOM05D007513 ORTHO05D008148 1.1e-07 60.1 64 53.1
arahy.Tifrunner.gnm1.ann1.QIF42D Arachis hypogaea HOM05D007513 ORTHO05D008148 1.5e-07 59.7 63 50.8
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 1.9e-07 59.3 46 65.2
RcHm_v2.0_Chr5g0053551 Rosa chinensis HOM05D015974 ORTHO05D008148 1.9e-07 59.3 97 40.2
FAN19G1675 Fragaria x ananassa HOM05D015974 ORTHO05D008148 2.5e-07 58.9 97 39.2
FAN23G1252 Fragaria x ananassa HOM05D015974 ORTHO05D008148 2.5e-07 58.9 97 39.2
FAN28G2668 Fragaria x ananassa HOM05D015974 ORTHO05D008148 2.5e-07 58.9 97 39.2
FvH4_1g17450 Fragaria vesca HOM05D015974 ORTHO05D008148 4.2e-07 58.2 91 40.7
SEGI_38697 Sequoiadendron giganteum HOM05D007513 ORTHO05D008148 4.2e-07 58.2 100 38.0
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 1.2e-06 56.6 57 52.6
arahy.Tifrunner.gnm1.ann1.X3Z0KH Arachis hypogaea HOM05D003009 ORTHO05D008148 1.6e-06 56.2 53 52.8
RcHm_v2.0_Chr5g0053611 Rosa chinensis HOM05D015974 ORTHO05D008148 1.6e-06 56.2 57 52.6
Sopen03g007910 Solanum pennellii HOM05D007513 ORTHO05D008148 2.1e-06 55.8 46 56.5
Phvul.010G166000 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 2.7e-06 55.5 37 62.2
arahy.Tifrunner.gnm1.ann1.N7EVBW Arachis hypogaea HOM05D007513 ORTHO05D008148 6.1e-06 54.3 39 66.7
Lj6g0007185 Lotus japonicus HOM05D007513 ORTHO05D008148 8.0e-06 53.9 74 40.5


User provided reference genes

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