Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 8.3e-260 899.8 444 100.0
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 8.8e-153 544.3 443 65.0
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.8e-150 536.6 448 64.1
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.4e-142 510.4 445 62.7
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 4.3e-139 498.8 443 60.0
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 2.8e-138 496.1 429 64.6
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.1e-126 457.6 447 56.2
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 3.0e-124 449.5 444 54.7
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 9.5e-123 444.5 482 51.7
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 1.4e-121 440.7 444 52.3
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 4.0e-121 439.1 448 52.5
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 8.3e-119 431.4 444 53.2
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 5.1e-116 422.2 444 52.0
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 6.6e-116 421.8 446 53.1
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 4.3e-115 419.1 445 51.5
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 6.2e-114 415.2 448 50.7
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 5.8e-112 408.7 448 48.4
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 7.6e-112 408.3 447 48.5
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 7.6e-112 408.3 448 48.4
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 2.2e-111 406.8 448 48.7
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 3.8e-111 406.0 447 49.7
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.1e-110 404.4 448 48.2
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 2.4e-110 403.3 447 49.7
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.6e-109 399.1 448 48.2
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 1.1e-107 394.4 448 48.4
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 1.3e-106 391.0 448 46.4
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 2.8e-106 389.8 451 49.4
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 4.8e-106 389.0 446 47.3
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 1.1e-105 387.9 448 49.6
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 5.3e-105 385.6 447 47.7
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 9.0e-105 384.8 445 48.1
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 9.0e-105 384.8 448 47.8
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 1.2e-104 384.4 442 48.4
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 1.7e-103 380.6 448 48.4
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 2.2e-103 380.2 448 45.3
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 2.2e-103 380.2 448 48.2
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 3.2e-102 376.3 446 47.1
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 1.2e-101 374.4 448 45.8
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 4.6e-101 372.5 444 48.0
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 6.0e-101 372.1 445 46.7
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 6.0e-101 372.1 448 47.5
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.3e-100 370.9 448 46.9
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 3.9e-100 369.4 448 47.1
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 3.9e-100 369.4 447 45.2
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 6.6e-100 368.6 448 46.4
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 4.3e-99 365.9 448 47.3
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 7.3e-99 365.2 460 45.7
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 1.6e-98 364.0 442 44.6
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 2.8e-98 363.2 448 47.1
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 3.6e-98 362.8 447 44.5
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.4e-97 360.9 448 47.5
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 1.4e-97 360.9 447 43.8
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 3.1e-97 359.8 448 45.5
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.2e-96 357.8 445 45.4
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.5e-96 357.5 440 46.6
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 2.6e-96 356.7 441 46.3
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 5.8e-96 355.5 442 43.9
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 7.6e-96 355.1 442 44.8
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 2.9e-95 353.2 449 45.7
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 3.8e-95 352.8 447 43.6
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 4.9e-95 352.4 450 44.7
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.9e-94 350.5 443 44.0
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 2.1e-93 347.1 442 43.2
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 2.7e-93 346.7 448 44.9
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 1.8e-92 344.0 447 42.7
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 3.0e-92 343.2 447 43.6
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 5.1e-92 342.4 442 42.5
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 8.7e-92 341.7 447 42.3
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.3e-91 339.7 449 44.5
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 7.4e-91 338.6 446 41.3
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 9.6e-91 338.2 447 41.8
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 9.6e-91 338.2 500 40.0
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 2.1e-90 337.0 444 42.1
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 1.8e-89 334.0 443 42.7
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 2.0e-88 330.5 440 42.0
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 2.6e-88 330.1 447 41.6
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 2.6e-88 330.1 447 41.6
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.3e-87 327.8 442 41.2
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.3e-87 327.8 442 41.2
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 1.7e-87 327.4 447 41.4
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 2.2e-87 327.0 447 40.9
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 2.9e-87 326.6 447 41.2
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 2.5e-86 323.6 448 40.4
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 5.1e-84 315.8 446 40.8
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 1.6e-82 310.8 473 39.1
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.8e-81 307.4 447 40.9
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 4.0e-81 306.2 398 43.0
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 9.0e-81 305.1 335 51.6
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 2.0e-80 303.9 448 40.0
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 1.7e-79 300.8 507 36.7
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 4.2e-78 296.2 433 39.0
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 3.5e-77 293.1 241 64.3
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.2e-74 283.9 361 45.7
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 3.2e-70 270.0 454 37.9
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 2.2e-66 257.3 445 36.9
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 5.9e-64 249.2 442 34.6
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 1.2e-61 241.5 450 35.1
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 2.6e-59 233.8 446 35.4
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.5e-56 224.6 447 33.1
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 7.7e-56 222.2 442 33.3
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 3.8e-55 219.9 368 39.9
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 3.8e-55 219.9 418 34.9
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 6.5e-55 219.2 445 33.0
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 8.5e-55 218.8 440 33.0
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 2.0e-51 207.6 376 36.2
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 9.4e-38 162.2 244 45.5
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 2.7e-37 160.6 436 28.9
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 4.9e-34 149.8 275 35.6
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 2.8e-29 134.0 385 25.7
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 2.6e-27 127.5 116 52.6
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.3e-23 115.2 125 47.2
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 4.7e-21 106.7 243 29.6
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 2.2e-18 97.8 155 37.4
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 7.0e-17 92.8 79 53.2
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 8.6e-15 85.9 71 54.9
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 3.3e-14 84.0 96 44.8
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 8.9e-12 75.9 182 30.2
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 3.9e-07 60.5 139 28.8
SEGI_15616 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 9.5e-06 55.8 74 40.5


User provided reference genes

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