Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 0.0e+00 2584.7 1342 100.0
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 0.0e+00 1868.2 1320 78.2
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 0.0e+00 1447.6 1079 73.8
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1327.4 1226 60.4
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1323.9 1218 61.6
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1321.6 1218 61.5
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1296.2 1192 61.1
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1293.9 1230 60.0
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1280.0 1222 60.2
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1278.5 1222 60.1
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1268.4 1231 59.7
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 0.0e+00 1267.3 1232 58.0
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1264.6 1209 59.2
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1259.6 1225 58.6
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1251.9 1219 58.7
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 0.0e+00 1248.4 1230 58.0
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1247.3 1232 57.0
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1246.5 1231 57.2
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1243.8 1188 59.0
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 0.0e+00 1239.9 1239 58.2
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1238.0 1230 57.6
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 0.0e+00 1227.2 1250 55.8
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1224.9 1280 55.9
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1224.5 1177 59.0
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1219.5 1232 56.2
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 0.0e+00 1218.8 1248 55.8
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 0.0e+00 1217.2 1280 55.0
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1213.0 1291 55.1
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 0.0e+00 1213.0 1238 55.7
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 0.0e+00 1210.7 1240 55.9
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 0.0e+00 1208.0 1235 57.0
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1200.3 1259 55.0
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1198.0 1223 56.4
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1196.8 1223 56.5
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 0.0e+00 1195.3 1221 57.3
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 0.0e+00 1195.3 1179 57.8
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 1194.9 1181 57.3
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 0.0e+00 1187.6 1219 55.9
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 0.0e+00 1184.1 1243 55.9
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 0.0e+00 1183.7 1221 56.0
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 0.0e+00 1179.9 1187 56.4
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 0.0e+00 1177.2 1244 55.2
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 0.0e+00 1175.2 1170 56.2
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 0.0e+00 1171.8 1232 55.5
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 0.0e+00 1163.3 1172 56.3
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 0.0e+00 1156.7 1149 57.5
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1153.7 1213 56.1
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 0.0e+00 1153.3 1220 54.6
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 0.0e+00 1143.3 1019 63.3
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 0.0e+00 1140.2 1269 54.4
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 0.0e+00 1125.5 1233 53.3
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 0.0e+00 1123.2 1188 54.5
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 0.0e+00 1123.2 1299 52.3
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 0.0e+00 1106.7 1241 53.0
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 0.0e+00 1105.9 1241 52.5
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 0.0e+00 1105.5 1271 50.7
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 1088.9 1240 53.1
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 0.0e+00 1087.0 1234 53.9
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 1078.9 1229 53.0
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 0.0e+00 1077.4 1222 51.2
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 0.0e+00 1076.2 1179 53.5
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 9.2e-312 1073.5 1183 53.8
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 7.0e-310 1067.8 1254 51.8
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 1.9e-307 1059.7 1226 53.1
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 2.0e-304 1049.7 1183 52.2
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 1.8e-302 1043.1 1218 50.8
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 5.3e-302 1041.6 1163 51.7
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 1.0e-300 1037.3 1235 50.6
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 1.4e-297 1026.9 1215 50.4
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 2.6e-296 1022.7 1179 52.7
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 7.5e-296 1021.1 1211 51.0
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 1.0e-289 1000.7 843 69.5
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 1.2e-285 987.3 1230 49.0
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 2.7e-285 986.1 1230 48.8
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 4.5e-285 985.3 1198 49.7
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 1.1e-275 954.1 1230 49.4
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 4.6e-269 932.2 1043 53.1
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.3e-268 930.6 1102 51.0
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 2.3e-268 929.9 1223 46.9
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 3.7e-263 912.5 1058 51.1
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 1.6e-250 870.5 1274 45.5
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 4.0e-233 812.8 731 61.7
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 3.2e-230 803.1 1055 46.8
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 7.1e-230 802.0 1216 42.5
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 4.8e-226 789.3 1236 41.9
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 5.3e-209 732.6 1207 42.9
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 6.5e-207 725.7 981 44.3
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 1.4e-206 724.5 779 54.6
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 1.2e-173 615.1 614 53.9
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 2.6e-171 607.4 1167 38.6
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 2.8e-162 577.4 1205 36.6
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 3.1e-132 477.6 1128 35.2
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 5.2e-132 476.9 1225 33.1
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 3.8e-122 444.1 629 45.6
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 4.9e-122 443.7 387 62.3
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 2.2e-106 391.7 445 55.3
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 6.2e-101 373.6 394 51.8
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.7e-85 322.4 507 41.0
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 2.0e-67 262.3 1273 27.0
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.1e-64 252.3 387 40.6
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.4e-44 185.7 202 52.5
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 7.8e-43 180.6 163 65.0
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 3.2e-36 158.7 197 51.8
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 9.5e-33 147.1 271 35.4
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.8e-31 142.9 86 75.6
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 6.8e-31 141.0 254 36.6
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 3.4e-30 138.7 200 46.5
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 2.7e-27 129.0 96 62.5
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 8.6e-26 124.0 76 73.7
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 3.1e-23 115.5 144 48.6
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 5.8e-22 111.3 92 59.8
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 3.0e-18 99.0 83 61.4
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 3.1e-15 89.0 98 53.1
TAR629G2211 Trochodendron aralioides HOM05D002089 ORTHO05D022294 9.0e-07 60.8 81 44.4
Cre07.g347700 Chlamydomonas reinhardtii HOM05D006963 ORTHO05D141144 1.2e-06 60.5 139 28.8


User provided reference genes

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