Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.5e-58 229.2 106 100.0
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 3.1e-48 194.9 126 74.6
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 5.4e-48 194.1 106 82.1
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 2.0e-47 192.2 106 80.2
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 3.5e-47 191.4 105 81.0
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 4.5e-47 191.0 106 80.2
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.0e-46 187.6 106 81.1
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 1.9e-45 185.7 106 77.4
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 5.5e-45 184.1 103 79.6
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 9.5e-45 183.3 106 76.4
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 2.8e-44 181.8 104 77.9
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 1.4e-43 179.5 106 75.5
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.8e-43 179.1 107 72.9
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 3.0e-43 178.3 95 81.1
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 4.0e-43 177.9 106 76.4
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 5.2e-43 177.6 105 74.3
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 6.8e-43 177.2 106 76.4
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 1.2e-42 176.4 106 74.5
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 2.6e-42 175.3 106 73.6
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 2.6e-42 175.3 103 72.8
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 7.5e-42 173.7 100 78.0
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 1.3e-41 172.9 107 72.9
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 2.2e-41 172.2 106 73.6
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 2.2e-41 172.2 106 71.7
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.9e-41 171.0 105 71.4
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 6.3e-41 170.6 101 73.3
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 8.3e-41 170.2 103 71.8
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 8.3e-41 170.2 106 70.8
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 1.1e-40 169.9 104 74.0
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.8e-40 169.1 91 82.4
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.4e-40 168.7 103 74.8
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 3.1e-40 168.3 106 70.8
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 3.1e-40 168.3 104 71.2
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 4.1e-40 167.9 103 74.8
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 5.4e-40 167.5 94 76.6
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.2e-39 166.4 103 73.8
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 2.7e-39 165.2 104 73.1
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.0e-38 163.3 103 70.9
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.0e-38 163.3 103 73.8
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.3e-38 162.9 95 75.8
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 3.8e-38 161.4 106 68.9
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 6.6e-38 160.6 104 70.2
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 2.5e-37 158.7 109 67.9
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 3.3e-37 158.3 107 68.2
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.6e-37 157.5 100 70.0
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 5.6e-37 157.5 100 70.0
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 7.3e-37 157.1 113 67.3
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 1.6e-36 156.0 107 66.4
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 2.1e-36 155.6 95 70.5
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 2.8e-36 155.2 103 66.0
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 2.8e-36 155.2 106 65.1
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 2.8e-36 155.2 106 67.0
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 3.6e-36 154.8 107 68.2
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.1e-36 154.1 102 69.6
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.0e-35 153.3 100 68.0
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 2.3e-35 152.1 108 63.0
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 3.0e-35 151.8 107 67.3
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.0e-35 151.4 100 68.0
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 6.8e-35 150.6 106 61.3
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 8.9e-35 150.2 104 65.4
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.2e-34 149.8 97 69.1
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.2e-34 149.8 100 67.0
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.2e-34 149.8 104 65.4
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.0e-34 149.1 104 65.4
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 5.7e-34 147.5 112 61.6
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 7.5e-34 147.1 105 61.9
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 7.5e-34 147.1 105 60.0
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.7e-33 146.0 104 64.4
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 2.2e-33 145.6 105 61.0
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.9e-33 145.2 101 65.3
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.9e-33 145.2 101 65.3
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 2.9e-33 145.2 103 65.0
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 1.8e-32 142.5 105 59.0
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.4e-32 142.1 104 62.5
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.1e-32 141.4 100 64.0
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 7.0e-32 140.6 105 60.0
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 7.0e-32 140.6 75 82.7
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 9.2e-32 140.2 79 78.5
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 9.2e-32 140.2 173 42.8
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.2e-31 139.8 105 61.9
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.2e-31 139.8 108 61.1
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 1.6e-31 139.4 105 59.0
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 1.6e-31 139.4 105 56.2
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.6e-31 139.4 75 82.7
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 4.6e-31 137.9 124 52.4
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 7.8e-31 137.1 108 59.3
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 2.3e-30 135.6 105 55.2
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 6.6e-30 134.0 78 79.5
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.6e-30 133.7 97 61.9
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 2.5e-29 132.1 98 61.2
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 7.3e-29 130.6 100 56.0
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 9.5e-29 130.2 118 52.5
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.2e-28 129.8 130 50.0
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 1.6e-28 129.4 122 50.8
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 2.8e-28 128.6 127 48.0
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 2.8e-28 128.6 77 71.4
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 3.6e-28 128.3 122 50.0
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 3.6e-28 128.3 122 50.0
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 3.6e-28 128.3 90 63.3
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 4.7e-28 127.9 103 61.2
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 6.2e-28 127.5 122 47.5
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 6.2e-28 127.5 103 53.4
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.0e-27 126.7 103 60.2
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.8e-27 125.9 88 61.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 4.0e-27 124.8 74 77.0
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 4.0e-27 124.8 75 74.7
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 6.8e-27 124.0 98 52.0
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.2e-26 123.2 78 71.8
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 5.8e-26 120.9 78 71.8
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 4.9e-25 117.9 73 75.3
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.1e-24 116.7 70 77.1
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.4e-24 116.3 70 71.4
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 7.0e-24 114.0 69 73.9
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 9.2e-24 113.6 99 46.5
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 2.7e-23 112.1 78 64.1
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.3e-22 109.0 69 72.5
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 3.0e-22 108.6 73 67.1
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 4.0e-19 98.2 77 55.8
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 4.0e-19 98.2 73 63.0
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 2.0e-18 95.9 122 41.8
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 3.4e-18 95.1 74 60.8
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 3.7e-17 91.7 51 78.4
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 4.9e-17 91.3 103 38.8
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.2e-12 76.6 40 85.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 4.0e-11 71.6 50 64.0
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 4.0e-11 71.6 90 38.9
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 6.8e-11 70.9 40 72.5
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 6.0e-07 57.8 61 47.5
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 1.0e-06 57.0 52 51.9


User provided reference genes

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