Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 4.6e-56 221.1 118 100.0
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 9.5e-46 186.8 108 95.4
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 3.9e-31 138.3 111 70.3
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 2.0e-27 125.9 116 62.1
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 3.5e-24 115.2 111 63.1
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 3.0e-23 112.1 101 63.4
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 6.6e-23 110.9 110 60.9
Actinidia35470 Actinidia chinensis HOM05D005110 ORTHO05D006074 1.9e-22 109.4 100 62.0
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.9e-22 109.4 110 60.0
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 2.5e-22 109.0 118 57.6
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 2.5e-22 109.0 99 63.6
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 7.3e-22 107.5 108 59.3
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 1.3e-21 106.7 98 63.3
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.8e-20 102.8 110 56.4
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 9.0e-20 100.5 110 54.5
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 9.0e-20 100.5 100 55.0
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.2e-19 100.1 115 52.2
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 1.5e-19 99.8 110 54.5
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 3.4e-19 98.6 107 53.3
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 4.5e-19 98.2 110 52.7
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 5.8e-19 97.8 116 50.0
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 7.6e-19 97.4 107 49.5
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 7.6e-19 97.4 110 52.7
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 1.3e-18 96.7 107 52.3
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 2.9e-18 95.5 105 52.4
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 3.8e-18 95.1 108 53.7
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 4.9e-18 94.7 104 50.0
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 8.4e-18 94.0 107 47.7
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 1.1e-17 93.6 104 51.0
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 1.4e-17 93.2 107 55.1
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 1.4e-17 93.2 111 48.6
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 1.9e-17 92.8 110 53.6
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 3.2e-17 92.0 100 50.0
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 4.2e-17 91.7 98 53.1
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 4.2e-17 91.7 101 50.5
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 5.4e-17 91.3 100 52.0
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 9.3e-17 90.5 110 48.2
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 9.3e-17 90.5 99 53.5
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 9.3e-17 90.5 111 50.5
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 2.1e-16 89.4 104 51.9
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 2.1e-16 89.4 104 51.9
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 2.1e-16 89.4 104 51.9
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 2.1e-16 89.4 104 51.9
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 2.7e-16 89.0 107 54.2
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 2.7e-16 89.0 96 51.0
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 3.5e-16 88.6 99 53.5
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 4.6e-16 88.2 101 51.5
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 6.0e-16 87.8 104 49.0
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 6.0e-16 87.8 106 50.9
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 6.0e-16 87.8 98 52.0
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 7.9e-16 87.4 107 48.6
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 1.0e-15 87.0 96 55.2
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 1.0e-15 87.0 105 47.6
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.3e-15 86.7 105 46.7
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 1.3e-15 86.7 95 53.7
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 1.8e-15 86.3 116 47.4
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 1.8e-15 86.3 110 48.2
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 1.8e-15 86.3 101 48.5
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 2.3e-15 85.9 104 45.2
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 3.9e-15 85.1 115 48.7
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 3.9e-15 85.1 99 50.5
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 5.1e-15 84.7 98 52.0
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 8.7e-15 84.0 115 45.2
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 8.7e-15 84.0 98 49.0
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 1.1e-14 83.6 110 48.2
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.1e-14 83.6 110 46.4
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 1.5e-14 83.2 107 43.9
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 1.9e-14 82.8 100 46.0
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 1.9e-14 82.8 104 43.3
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 2.5e-14 82.4 102 49.0
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 2.5e-14 82.4 105 44.8
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 3.3e-14 82.0 102 49.0
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 3.3e-14 82.0 115 46.1
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 4.3e-14 81.6 108 47.2
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 5.6e-14 81.3 94 51.1
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 9.6e-14 80.5 110 42.7
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 1.6e-13 79.7 107 48.6
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 1.6e-13 79.7 111 49.5
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 6.2e-13 77.8 110 47.3
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.1e-12 77.0 94 46.8
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 1.8e-12 76.3 100 44.0
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 1.8e-12 76.3 96 44.8
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 3.1e-12 75.5 92 48.9
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 4.0e-12 75.1 106 45.3
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 6.9e-12 74.3 106 44.3
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 6.9e-12 74.3 100 42.0
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 2.6e-11 72.4 108 38.9
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 2.6e-11 72.4 110 40.9
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 7.6e-11 70.9 108 38.9
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 7.6e-11 70.9 105 41.9
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 7.6e-11 70.9 105 41.9
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 9.9e-11 70.5 111 38.7
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.3e-10 70.1 108 38.9
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.3e-10 70.1 105 42.9
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.3e-10 70.1 112 38.4
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 1.7e-10 69.7 108 38.0
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 1.7e-10 69.7 105 41.0
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 1.7e-10 69.7 101 40.6
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 2.9e-10 68.9 108 37.0
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 2.9e-10 68.9 102 44.1
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 4.9e-10 68.2 99 41.4
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 4.9e-10 68.2 99 41.4
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 4.9e-10 68.2 102 43.1
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 6.4e-10 67.8 101 41.6
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 1.1e-09 67.0 108 37.0
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.4e-09 66.6 92 42.4
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.9e-09 66.2 104 38.5
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 2.4e-09 65.9 102 39.2
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 2.4e-09 65.9 108 38.9
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.4e-09 65.9 101 40.6
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 2.4e-09 65.9 108 38.9
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 5.5e-09 64.7 108 36.1
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 7.1e-09 64.3 102 39.2
unitig_746.g26607 Utricularia gibba HOM05D005110 ORTHO05D006074 7.1e-09 64.3 78 43.6
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 9.3e-09 63.9 99 42.4
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 2.1e-08 62.8 111 42.3
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.1e-08 62.8 94 38.3
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.1e-08 62.8 94 38.3
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 6.0e-08 61.2 108 35.2
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 6.0e-08 61.2 107 36.4
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 6.0e-08 61.2 99 39.4
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 6.7e-07 57.8 64 53.1
TPR.G4458 Trifolium pratense HOM05D005110 ORTHO05D006074 3.3e-06 55.5 59 50.8
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 3.3e-06 55.5 96 37.5


User provided reference genes

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