Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14335 Vaccinium macrocarpon HOM05D002789 ORTHO05D036367 1.8e-41 172.2 89 100.0
CSS0027967 Camellia sinensis var. sinensis HOM05D002789 ORTHO05D003185 1.8e-09 65.9 47 78.7
CSS0031098 Camellia sinensis var. sinensis HOM05D002789 ORTHO05D003185 1.8e-09 65.9 47 78.7
Dinv22808 Davidia involucrata HOM05D002789 ORTHO05D003185 4.1e-09 64.7 47 78.7
TAR633G2089 Trochodendron aralioides HOM05D002789 ORTHO05D003185 4.1e-09 64.7 47 78.7
Gohir.D07G115200 Gossypium hirsutum HOM05D002789 ORTHO05D003185 5.4e-09 64.3 47 74.5
Gorai.001G123400 Gossypium raimondii HOM05D002789 ORTHO05D003185 5.4e-09 64.3 47 74.5
TAR633G2341 Trochodendron aralioides HOM05D002789 ORTHO05D003185 7.0e-09 63.9 47 78.7
AUR62001530 Chenopodium quinoa HOM05D002789 ORTHO05D003185 1.2e-08 63.2 49 75.5
AUR62020252 Chenopodium quinoa HOM05D002789 ORTHO05D003185 1.2e-08 63.2 49 75.5
Lj3g0016839 Lotus japonicus HOM05D002789 ORTHO05D003185 1.2e-08 63.2 50 74.0
Dinv22806 Davidia involucrata HOM05D002789 ORTHO05D003185 1.6e-08 62.8 47 76.6
Gohir.A07G111450 Gossypium hirsutum HOM05D002789 ORTHO05D003185 1.6e-08 62.8 47 72.3
Nitab4.5_0001135g0040 Nicotiana tabacum HOM05D002789 ORTHO05D003185 1.6e-08 62.8 48 75.0
Manes.11G164700 Manihot esculenta HOM05D002789 ORTHO05D003185 2.0e-08 62.4 50 78.0
Nitab4.5_0003516g0030 Nicotiana tabacum HOM05D002789 ORTHO05D003185 2.0e-08 62.4 48 72.9
Sabra04G0134800 Salix brachista HOM05D002789 ORTHO05D003185 2.0e-08 62.4 47 76.6
MD03G1150700 Malus domestica HOM05D002789 ORTHO05D003185 2.7e-08 62.0 47 78.7
Phvul.011G096700 Phaseolus vulgaris HOM05D002789 ORTHO05D003185 2.7e-08 62.0 49 71.4
Potri.004G199600 Populus trichocarpa HOM05D002789 ORTHO05D003185 2.7e-08 62.0 47 74.5
SGA_v2.0_scaffold7G03993 Striga asiatica HOM05D002789 ORTHO05D003185 2.7e-08 62.0 48 70.8
Lj2A971G35 Lonicera japonica HOM05D002789 ORTHO05D003185 3.5e-08 61.6 48 77.1
Nn7g36100 Nelumbo nucifera HOM05D002789 ORTHO05D003185 3.5e-08 61.6 47 72.3
Aqoxy4G02708 Aquilegia oxysepala HOM05D002789 ORTHO05D003185 4.5e-08 61.2 48 72.9
Rhsim01G0202900 Rhododendron simsii HOM05D002789 ORTHO05D003185 4.5e-08 61.2 47 80.9
arahy.Tifrunner.gnm1.ann1.FY23RQ Arachis hypogaea HOM05D002789 ORTHO05D003185 5.9e-08 60.8 39 79.5
arahy.Tifrunner.gnm1.ann1.JG5ZXS Arachis hypogaea HOM05D002789 ORTHO05D003185 5.9e-08 60.8 39 79.5
Potri.009G161001 Populus trichocarpa HOM05D002789 ORTHO05D036367 7.8e-08 60.5 62 62.9
Duzib150G0663 Durio zibethinus HOM05D002789 ORTHO05D003185 1.0e-07 60.1 47 74.5
Manes.04G000700 Manihot esculenta HOM05D002789 ORTHO05D003185 1.0e-07 60.1 47 74.5
Ah.08g223210 Amaranthus hybridus HOM05D002789 ORTHO05D003185 1.3e-07 59.7 53 67.9
Cpa.g.sc195.34 Carica papaya HOM05D002789 ORTHO05D003185 1.3e-07 59.7 48 75.0
Ciclev10028755m.g Citrus clementina HOM05D002789 ORTHO05D003185 1.3e-07 59.7 41 78.0
Ca_19445_v3 Cicer arietinum L. HOM05D002789 ORTHO05D003185 1.7e-07 59.3 39 79.5
Duzib170G0571 Durio zibethinus HOM05D002789 ORTHO05D003185 1.7e-07 59.3 47 70.2
Glyma.11G180900 Glycine max HOM05D002789 ORTHO05D003185 1.7e-07 59.3 39 76.9
Glyma.12G092300 Glycine max HOM05D002789 ORTHO05D003185 1.7e-07 59.3 39 76.9
Lalb_Chr03g0028301 Lupinus albus HOM05D002789 ORTHO05D003185 1.7e-07 59.3 39 76.9
Actinidia37069 Actinidia chinensis HOM05D002789 ORTHO05D003185 2.3e-07 58.9 42 78.6
CiPaw.13G132500 Carya illinoinensis HOM05D002789 ORTHO05D003185 2.3e-07 58.9 48 75.0
PGR119G2521 Punica granatum HOM05D002789 ORTHO05D003185 2.3e-07 58.9 52 69.2
Peaxi162Scf00224g00516 Petunia axillaris HOM05D002789 ORTHO05D003185 3.9e-07 58.2 48 72.9
Solyc11g068730.2 Solanum lycopersicum HOM05D002789 ORTHO05D003185 3.9e-07 58.2 48 72.9
Sopen11g027440 Solanum pennellii HOM05D002789 ORTHO05D003185 3.9e-07 58.2 48 72.9
PGSC0003DMG400026329 Solanum tuberosum HOM05D002789 ORTHO05D003185 3.9e-07 58.2 48 70.8
Migut.D02426 Erythranthe guttata HOM05D002789 ORTHO05D003185 5.0e-07 57.8 48 68.8
Nn2g15500 Nelumbo nucifera HOM05D002789 ORTHO05D003185 5.0e-07 57.8 47 74.5
RcHm_v2.0_Chr5g0047031 Rosa chinensis HOM05D002789 ORTHO05D003185 5.0e-07 57.8 49 69.4
MSTRG.21025 Avicennia marina HOM05D002789 ORTHO05D003185 6.6e-07 57.4 48 70.8
MBI17_g34508_MAGBIO Magnolia biondii HOM05D002789 ORTHO05D003185 6.6e-07 57.4 48 75.0
Medtr4g052390 Medicago truncatula HOM05D002789 ORTHO05D003185 6.6e-07 57.4 39 76.9
Hund18781 Selenicereus undatus HOM05D002789 ORTHO05D003185 6.6e-07 57.4 47 72.3
TPR.G17206 Trifolium pratense HOM05D002789 ORTHO05D003185 6.6e-07 57.4 39 74.4
MD11G1170100 Malus domestica HOM05D002789 ORTHO05D003185 1.1e-06 56.6 49 71.4
QL01p011767 Quercus lobata HOM05D002789 ORTHO05D003185 1.1e-06 56.6 47 70.2
Atru.chr3.3159 Acer truncatum HOM05D002789 ORTHO05D003185 1.5e-06 56.2 41 73.2
CAN.G745.22 Capsicum annuum HOM05D002789 ORTHO05D003185 1.5e-06 56.2 47 70.2
CDE04G3244 Ceratophyllum demersum HOM05D002789 ORTHO05D003185 1.5e-06 56.2 47 68.1
Cc01_g08760 Coffea canephora HOM05D002789 ORTHO05D003185 1.5e-06 56.2 51 64.7
ECA240G0368 Erigeron canadensis HOM05D002789 ORTHO05D003185 1.5e-06 56.2 47 66.0
MBI17_g11951_MAGBIO Magnolia biondii HOM05D002789 ORTHO05D003185 1.5e-06 56.2 54 66.7
Thecc.09G277600 Theobroma cacao HOM05D002789 ORTHO05D003185 1.5e-06 56.2 50 70.0
VMungo1127G1590 Vigna mungo HOM05D002789 ORTHO05D003185 1.5e-06 56.2 39 71.8
Haze_23339 Corylus avellana HOM05D002789 ORTHO05D003185 1.9e-06 55.8 47 72.3
TWI79G0289 Tripterygium wilfordii HOM05D002789 ORTHO05D003185 2.5e-06 55.5 47 72.3
Lsat_1_v5_gn_3_117240 Lactuca sativa HOM05D002789 ORTHO05D003185 3.3e-06 55.1 47 63.8
CANSAT25G2714 Cannabis sativa HOM05D002789 ORTHO05D003185 4.3e-06 54.7 40 72.5
HanXRQChr03g0091481 Helianthus annuus HOM05D002789 ORTHO05D003185 4.3e-06 54.7 47 66.0
FAN25G2876 Fragaria x ananassa HOM05D002789 ORTHO05D003185 5.6e-06 54.3 47 66.0
CiPaw.13G132600 Carya illinoinensis HOM05D002789 ORTHO05D003185 7.3e-06 53.9 48 70.8
MELO3C025585.2 Cucumis melo HOM05D002789 ORTHO05D003185 7.3e-06 53.9 48 70.8
FvH4_3g25810 Fragaria vesca HOM05D002789 ORTHO05D003185 7.3e-06 53.9 47 63.8
FAN11G3565 Fragaria x ananassa HOM05D002789 ORTHO05D003185 7.3e-06 53.9 47 63.8
Os02g0635000 Oryza sativa ssp. japonica HOM05D002789 ORTHO05D003185 7.3e-06 53.9 49 61.2
Psat7g186680 Pisum sativum HOM05D002789 ORTHO05D003185 7.3e-06 53.9 39 71.8


User provided reference genes

Program Settings