Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14332 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 0.0e+00 1302.7 687 100.0
vmacro05316 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 6.5e-187 658.3 347 99.7
vmacro07201 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.4e-173 614.0 338 96.4
vmacro23438 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 3.5e-124 449.9 517 53.8
vmacro12702 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 5.0e-78 296.6 153 96.7
vmacro17734 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.5e-77 294.3 155 95.5
vmacro05300 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.7e-76 290.8 154 95.5
vmacro09783 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 6.1e-76 289.7 147 99.3
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.6e-52 211.8 466 40.6
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 8.3e-49 199.5 441 39.2
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.1e-45 189.1 154 64.3
Actinidia04406 Actinidia chinensis HOM05D019269 ORTHO05D021073 3.3e-13 81.3 65 53.8
Rhsim01G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000034 4.7e-12 77.4 73 47.9
Rhsim11G0056300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.2e-11 73.9 82 39.0
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-10 72.0 81 43.2
CSS0004175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.6e-10 71.6 190 29.5
CSS0029205 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.6e-10 71.6 190 29.5
CSS0042827 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.6e-10 71.6 252 27.8
CSS0043832 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.4e-10 70.9 178 28.7
CSS0036809 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.9e-09 68.2 254 27.6
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-09 66.6 89 33.7
MBI18_g08811_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 8.4e-09 66.6 76 40.8
CSS0008160 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.4e-08 65.9 254 26.4
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-08 65.5 129 27.9
RcHm_v2.0_Chr1g0329421 Rosa chinensis HOM05D000004 ORTHO05D000034 3.2e-08 64.7 226 26.5
SHI49964 Sapria himalayana HOM05D010253 ORTHO05D000002 3.2e-08 64.7 68 47.1
SHI50618 Sapria himalayana HOM05D010253 ORTHO05D000002 3.2e-08 64.7 68 47.1
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.4e-08 63.9 89 32.6
CSS0016236 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 7.1e-08 63.5 260 26.9
CSS0046557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-07 62.4 84 32.1
CSS0046839 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-07 62.0 89 32.6
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 3.5e-07 61.2 66 45.5
SHI35866 Sapria himalayana HOM05D010253 ORTHO05D000034 4.6e-07 60.8 85 31.8
Ca_28406_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.0e-07 60.5 84 41.7
Medtr1g053380 Medicago truncatula HOM05D008853 ORTHO05D000224 6.0e-07 60.5 101 38.6
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 6.0e-07 60.5 81 38.3
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.0e-07 60.5 74 37.8
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.8e-07 60.1 142 31.0
Ca_27653_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 7.8e-07 60.1 66 48.5
CSS0010354 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.0e-06 59.7 150 31.3
Ca_11772_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.0e-06 59.7 101 33.7
Ca_26969_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.0e-06 59.7 83 36.1
PSO541G6359 Papaver somniferum HOM05D010253 ORTHO05D000224 1.0e-06 59.7 70 42.9
Rhsim12G0125400 Rhododendron simsii HOM05D010253 ORTHO05D000224 1.0e-06 59.7 114 34.2
CSS0009117 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.3e-06 59.3 60 38.3
MD02G1270400 Malus domestica HOM05D000004 ORTHO05D000224 1.3e-06 59.3 214 25.2
PSO782G5639 Papaver somniferum HOM05D010253 ORTHO05D000224 1.3e-06 59.3 71 40.8
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.3e-06 58.5 66 39.4
CSS0024446 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.0e-06 58.2 69 34.8
Cpa.g.sc1.420 Carica papaya HOM05D016211 ORTHO05D000224 3.0e-06 58.2 59 44.1
Ca_23986_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.0e-06 58.2 72 40.3
Ca_28422_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.0e-06 58.2 76 40.8
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 3.0e-06 58.2 72 41.7
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 3.9e-06 57.8 163 30.1
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.9e-06 57.8 87 28.7
CSS0048981 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.9e-06 57.8 59 39.0
Ca_04722_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.9e-06 57.8 83 36.1
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 3.9e-06 57.8 67 41.8
PSO832G2831 Papaver somniferum HOM05D000004 ORTHO05D000034 3.9e-06 57.8 87 32.2
Rhsim11G0064300 Rhododendron simsii HOM05D000004 ORTHO05D000034 3.9e-06 57.8 189 30.7
CSS0025121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.1e-06 57.4 72 38.9
Oeu054402.1 Olea europaea HOM05D000004 ORTHO05D000224 5.1e-06 57.4 68 41.2
PSO017G1849 Papaver somniferum HOM05D010253 ORTHO05D000224 5.1e-06 57.4 72 38.9
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 5.1e-06 57.4 72 40.3
PSO478G1068 Papaver somniferum HOM05D000004 ORTHO05D000224 5.1e-06 57.4 84 33.3
CSS0010782 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.6e-06 57.0 72 38.9
Ca_05649_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 6.6e-06 57.0 72 38.9
Oeu015918.1 Olea europaea HOM05D009054 ORTHO05D000034 6.6e-06 57.0 65 40.0
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 6.6e-06 57.0 68 39.7
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 6.6e-06 57.0 72 40.3
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 6.6e-06 57.0 61 42.6
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 6.6e-06 57.0 61 42.6
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 8.6e-06 56.6 151 29.1
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 8.6e-06 56.6 151 29.1
Ca_14466_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 8.6e-06 56.6 72 38.9
Ca_24073_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 8.6e-06 56.6 72 37.5
Ca_31179_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 8.6e-06 56.6 76 36.8
Lj3g0021191 Lotus japonicus HOM05D000004 ORTHO05D000002 8.6e-06 56.6 71 40.8
Oeu047631.1 Olea europaea HOM05D000004 ORTHO05D000224 8.6e-06 56.6 68 38.2


User provided reference genes

Program Settings