Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 5.8e-186 654.1 324 100.0
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 5.8e-186 654.1 324 100.0
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 4.3e-133 478.4 385 67.5
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 4.5e-114 415.2 330 66.4
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 2.0e-109 399.8 325 64.6
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.3e-97 360.5 333 56.8
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 8.9e-94 347.8 330 54.2
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.6e-93 346.3 333 57.1
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 4.4e-93 345.5 330 54.8
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 5.7e-93 345.1 300 59.3
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 2.2e-92 343.2 275 62.5
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 7.0e-91 338.2 323 56.7
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 2.0e-90 336.7 329 55.6
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.3e-89 334.0 275 60.4
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 3.9e-89 332.4 300 59.7
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 5.0e-89 332.0 251 66.1
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.5e-88 330.5 319 53.9
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 2.5e-88 329.7 312 57.1
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.1e-87 326.6 278 60.1
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 3.6e-87 325.9 330 54.8
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 4.7e-87 325.5 284 58.5
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 8.0e-87 324.7 328 54.3
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 8.0e-87 324.7 280 59.6
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 1.0e-86 324.3 266 61.7
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.4e-86 323.9 303 56.1
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 3.1e-86 322.8 335 53.4
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 4.0e-86 322.4 330 53.6
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 6.8e-86 321.6 273 60.4
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.2e-85 320.9 303 57.8
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 1.5e-85 320.5 330 55.5
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.5e-85 320.5 320 52.5
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 2.6e-85 319.7 307 56.4
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 7.5e-85 318.2 294 55.4
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 9.8e-85 317.8 328 55.2
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 9.8e-85 317.8 251 62.9
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.3e-84 317.4 254 62.2
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.7e-84 317.0 254 61.8
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.7e-84 317.0 254 61.8
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 3.7e-84 315.8 332 50.3
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 3.7e-84 315.8 334 50.9
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 4.9e-84 315.5 252 63.5
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.4e-83 313.9 334 51.5
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.9e-83 313.5 327 52.3
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 1.9e-83 313.5 329 53.5
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.9e-83 313.5 254 62.6
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.4e-83 313.2 327 52.3
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 2.4e-83 313.2 331 54.1
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 3.2e-83 312.8 248 62.9
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 3.2e-83 312.8 248 62.9
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 3.2e-83 312.8 241 64.3
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 4.1e-83 312.4 248 62.5
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 4.1e-83 312.4 270 57.8
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 5.4e-83 312.0 329 52.6
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 7.0e-83 311.6 249 60.6
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.2e-82 310.8 236 63.6
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.2e-82 310.8 229 65.9
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.6e-82 310.5 331 52.6
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 2.7e-82 309.7 309 51.8
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 1.0e-81 307.8 324 54.3
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.0e-81 307.8 264 58.3
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.3e-81 307.4 329 49.8
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.7e-81 307.0 331 50.2
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 1.7e-81 307.0 329 49.8
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 2.3e-81 306.6 258 58.9
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.3e-81 306.6 303 55.8
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 3.0e-81 306.2 272 57.4
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.9e-81 305.8 329 49.8
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 3.9e-81 305.8 271 55.7
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 3.9e-81 305.8 228 64.9
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 8.6e-81 304.7 310 52.6
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.1e-80 304.3 249 62.7
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 1.5e-80 303.9 337 50.4
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.5e-80 303.9 251 59.4
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 4.3e-80 302.4 272 55.9
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 5.6e-80 302.0 306 54.6
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 5.6e-80 302.0 330 48.8
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.3e-80 301.6 317 51.1
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 7.3e-80 301.6 334 50.0
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 2.8e-79 299.7 260 60.8
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.8e-79 299.7 307 51.5
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 6.2e-79 298.5 271 55.4
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 8.0e-79 298.1 321 50.8
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 1.1e-78 297.7 230 62.2
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 6.8e-78 295.0 235 61.7
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 6.8e-78 295.0 273 55.7
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 6.8e-78 295.0 252 57.9
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 8.9e-78 294.7 231 64.1
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 8.9e-78 294.7 324 51.5
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.0e-77 293.5 273 55.7
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.4e-77 292.4 297 54.5
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 5.8e-77 292.0 334 49.4
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 3.2e-75 286.2 232 60.3
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 4.6e-74 282.3 305 52.5
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 6.6e-73 278.5 325 48.3
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 1.1e-72 277.7 250 54.0
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.0e-69 266.9 245 56.7
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 5.8e-69 265.4 219 59.8
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 1.9e-67 260.4 232 56.0
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.8e-63 246.5 234 53.4
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 7.8e-58 228.4 226 53.1
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 8.1e-55 218.4 218 53.2
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.8e-52 209.5 162 61.7
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.9e-52 209.1 158 68.4
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 5.4e-51 205.7 142 69.0
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 4.8e-47 192.6 244 44.3
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.4e-46 191.0 212 44.8
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 3.4e-45 186.4 243 44.0
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 2.1e-42 177.2 166 53.6
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 3.5e-42 176.4 269 38.7
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 6.0e-42 175.6 139 63.3
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 7.9e-42 175.3 139 61.2
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 2.3e-41 173.7 238 40.8
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.8e-39 166.0 199 46.2
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.1e-38 164.9 133 62.4
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.3e-36 157.9 138 55.1
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.2e-36 157.1 161 54.7
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 6.5e-36 155.6 141 53.2
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 1.1e-35 154.8 109 69.7
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 4.6e-34 149.4 120 55.0
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 2.4e-30 137.1 129 55.8
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 1.9e-24 117.5 110 54.5
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 7.4e-24 115.5 175 40.6
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.2e-15 87.4 64 65.6
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 1.7e-12 77.8 74 54.1
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.9e-12 77.0 73 52.1


User provided reference genes

Program Settings