Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 0.0e+00 1139.8 599 100.0
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 6.3e-170 601.7 450 74.4
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 1.9e-150 537.0 450 69.1
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 7.2e-150 535.0 460 65.9
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.2e-147 527.7 317 76.0
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 8.9e-140 501.5 406 70.9
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 9.2e-137 491.5 328 70.4
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.7e-135 487.3 280 79.3
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 2.9e-135 486.5 280 78.6
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 5.0e-135 485.7 280 78.6
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 5.0e-135 485.7 280 78.2
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 4.3e-134 482.6 280 77.5
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 4.3e-134 482.6 280 77.5
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 2.1e-133 480.3 280 77.5
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 3.6e-133 479.6 430 68.6
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 4.7e-133 479.2 280 77.1
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 4.7e-133 479.2 280 77.1
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 4.0e-132 476.1 255 82.0
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 6.8e-132 475.3 280 77.5
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 3.4e-131 473.0 280 78.2
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 4.4e-131 472.6 280 76.8
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 5.8e-131 472.2 255 81.6
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 9.8e-131 471.5 280 76.1
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 9.8e-131 471.5 280 76.1
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 1.7e-130 470.7 280 75.7
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 2.2e-130 470.3 280 74.6
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 2.9e-130 469.9 327 67.9
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 2.9e-130 469.9 283 75.3
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 3.7e-130 469.5 280 74.6
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 6.4e-130 468.8 255 81.6
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 8.3e-130 468.4 280 75.4
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.1e-129 468.0 280 74.6
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 1.1e-129 468.0 327 68.5
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 1.1e-129 468.0 280 76.1
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 1.1e-129 468.0 294 71.8
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 1.1e-129 468.0 280 76.1
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 1.4e-129 467.6 280 75.7
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 4.1e-129 466.1 283 75.3
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 5.4e-129 465.7 280 73.9
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 5.4e-129 465.7 284 75.4
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 1.2e-128 464.5 256 79.7
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 2.7e-128 463.4 255 81.6
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 2.7e-128 463.4 255 81.6
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 6.0e-128 462.2 252 79.4
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 6.0e-128 462.2 280 73.9
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 6.0e-128 462.2 325 66.8
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.3e-127 461.1 280 74.3
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 1.7e-127 460.7 255 80.8
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 2.3e-127 460.3 325 66.5
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 3.0e-127 459.9 252 79.0
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 3.9e-127 459.5 280 74.3
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 5.0e-127 459.1 255 80.8
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 5.0e-127 459.1 401 68.3
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 8.6e-127 458.4 280 74.3
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 1.1e-126 458.0 252 79.4
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 1.5e-126 457.6 255 80.4
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 7.3e-126 455.3 280 72.1
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 7.3e-126 455.3 255 79.2
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 7.3e-126 455.3 417 57.3
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 9.5e-126 454.9 280 72.9
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 9.5e-126 454.9 259 77.2
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 9.5e-126 454.9 280 73.9
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 9.5e-126 454.9 288 71.9
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 2.8e-125 453.4 251 81.7
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 3.6e-125 453.0 255 78.4
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 6.2e-125 452.2 259 76.8
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 8.1e-125 451.8 280 74.3
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 8.1e-125 451.8 464 58.4
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 1.8e-124 450.7 280 73.6
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 1.8e-124 450.7 303 69.0
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 2.3e-124 450.3 280 71.4
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 2.3e-124 450.3 312 68.9
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 4.0e-124 449.5 280 73.9
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 5.2e-124 449.1 280 73.2
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 6.8e-124 448.7 255 78.8
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 1.2e-123 448.0 265 78.1
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 1.5e-123 447.6 284 73.9
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 1.5e-123 447.6 280 72.9
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 2.0e-123 447.2 262 76.3
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 2.0e-123 447.2 255 78.8
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 2.6e-123 446.8 279 71.7
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 2.6e-123 446.8 282 73.8
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 2.6e-123 446.8 280 70.7
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 3.4e-123 446.4 383 63.4
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 9.8e-123 444.9 260 78.5
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 3.7e-122 443.0 252 77.4
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 4.9e-122 442.6 252 79.0
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 2.4e-121 440.3 253 79.1
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 2.4e-121 440.3 252 77.4
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 3.2e-121 439.9 254 78.7
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 4.1e-121 439.5 255 78.0
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 2.1e-120 437.2 280 71.4
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 4.6e-120 436.0 286 71.3
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 1.0e-119 434.9 316 64.9
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 3.0e-119 433.3 268 74.6
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 1.1e-118 431.4 255 76.5
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 2.5e-118 430.3 265 74.0
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 3.3e-118 429.9 229 83.0
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 4.3e-118 429.5 275 71.3
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 2.8e-117 426.8 280 68.9
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 3.6e-117 426.4 295 70.8
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 6.8e-116 422.2 229 82.1
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 8.9e-116 421.8 295 70.2
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 1.5e-115 421.0 282 69.9
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 6.4e-114 415.6 251 74.5
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 1.2e-112 411.4 254 74.0
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 6.6e-111 405.6 380 57.4
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 1.6e-109 401.0 280 66.8
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 1.8e-108 397.5 305 62.6
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 2.0e-107 394.0 240 75.4
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 1.7e-106 391.0 238 72.7
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 2.4e-105 387.1 240 73.3
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 1.3e-103 381.3 280 63.9
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 2.3e-103 380.6 210 78.6
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 8.7e-103 378.6 277 65.7
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 6.2e-101 372.5 251 69.3
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 3.6e-93 346.7 297 57.6
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 8.1e-93 345.5 199 79.4
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 6.9e-92 342.4 287 57.5
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 2.2e-90 337.4 299 52.2
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 3.5e-88 330.1 176 81.2
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 3.0e-87 327.0 279 57.7
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 1.7e-82 311.2 176 81.2
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 4.2e-81 306.6 249 58.6
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 5.5e-81 306.2 173 80.3
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 5.5e-81 306.2 173 80.3
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 9.3e-81 305.4 179 76.5
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 2.1e-80 304.3 276 54.3
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 1.9e-78 297.7 173 78.0
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 4.8e-77 293.1 205 68.3
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 6.3e-77 292.7 188 72.3
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 5.9e-75 286.2 272 53.3
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 1.0e-74 285.4 270 56.7
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 2.4e-68 264.2 257 52.1
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 2.9e-66 257.3 283 48.1
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 6.1e-64 249.6 188 63.8
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.4e-63 248.4 231 53.7
vmacro10636 Vaccinium macrocarpon HOM05D003041 ORTHO05D003400 5.1e-63 246.5 140 82.1
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 3.1e-60 237.3 250 48.4
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 4.1e-60 236.9 191 59.7
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.5e-54 218.4 208 55.3
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 4.4e-54 216.9 139 72.7
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 5.7e-54 216.5 139 72.7
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 9.7e-54 215.7 156 68.6
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 5.3e-52 209.9 179 54.7
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 2.5e-49 201.1 228 46.5
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 3.0e-47 194.1 230 44.8
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 2.6e-46 191.0 249 44.6
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 8.2e-45 186.0 185 51.4
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 3.7e-37 160.6 128 60.2
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 6.3e-37 159.8 124 59.7
Psat7g172360 Pisum sativum HOM05D004797 ORTHO05D005752 5.9e-35 153.3 84 75.0
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 3.6e-32 144.1 81 81.5
Migut.L00818 Erythranthe guttata HOM05D004797 ORTHO05D005752 5.2e-31 140.2 111 58.6
Rhsim07G0122700 Rhododendron simsii HOM05D012502 ORTHO05D338760 1.2e-22 112.5 114 46.5
unitig_60.g25645 Utricularia gibba HOM05D004797 ORTHO05D005752 2.6e-14 84.7 48 72.9
QL06p032345 Quercus lobata HOM05D004797 ORTHO05D050637 2.9e-13 81.3 42 71.4
QL93p0275_0020 Quercus lobata HOM05D004797 ORTHO05D050637 2.9e-13 81.3 42 71.4
Rhsim01G0085100 Rhododendron simsii HOM05D012502 ORTHO05D340087 2.9e-13 81.3 178 31.5
Rhsim01G0137600 Rhododendron simsii HOM05D012502 ORTHO05D340378 1.2e-11 75.9 137 33.6
Rhsim13G0060800 Rhododendron simsii HOM05D012502 ORTHO05D340135 1.1e-09 69.3 93 43.0
vmacro18677 Vaccinium macrocarpon HOM05D000127 ORTHO05D000243 4.3e-09 67.4 40 75.0
Cfa024013 Carpinus fangiana HOM05D040201 ORTHO05D034153 1.4e-07 62.4 146 28.1
Pp3c19_1530 Physcomitrium patens HOM05D003906 ORTHO05D004776 5.8e-06 57.0 159 26.4


User provided reference genes

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