Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14260 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.2e-191 672.9 335 100.0
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.8e-41 174.1 235 47.2
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 6.7e-28 129.0 286 32.5
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 5.3e-25 119.4 120 44.2
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 4.5e-24 116.3 322 26.4
vmacro17223 Vaccinium macrocarpon HOM05D002941 ORTHO05D007802 3.2e-22 110.2 238 32.4
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 2.3e-20 104.0 150 40.7
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 5.3e-17 92.8 220 30.5
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 2.0e-16 90.9 353 23.8
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 1.6e-13 81.3 157 33.1
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.1e-13 79.3 123 34.1
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.9e-13 79.0 143 28.7
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 7.9e-13 79.0 312 27.2
vmacro03671 Vaccinium macrocarpon HOM05D000178 ORTHO05D000229 1.0e-12 78.6 85 50.6
Phvul.002G096200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.7e-12 75.9 134 27.6
Rhsim06G0189900 Rhododendron simsii HOM05D208184 ORTHO05D009356 1.1e-11 75.1 69 52.2
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.6e-11 73.9 116 31.0
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.3e-11 73.6 110 30.0
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.4e-11 73.2 117 31.6
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.7e-11 72.8 116 30.2
vmacro05076 Vaccinium macrocarpon HOM05D002132 ORTHO05D002168 7.4e-11 72.4 296 26.7
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.7e-11 72.0 110 28.2
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 3.7e-10 70.1 118 32.2
Phvul.007G108700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.7e-10 70.1 107 29.9
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 3.7e-10 70.1 132 29.5
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 3.7e-10 70.1 132 29.5
Lj3g0017258 Lotus japonicus HOM05D002777 ORTHO05D001516 4.8e-10 69.7 112 28.6
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 4.8e-10 69.7 438 25.8
Lj2g0007640 Lotus japonicus HOM05D002777 ORTHO05D001516 8.2e-10 68.9 116 28.4
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.2e-10 68.9 111 27.0
Lj5g0007202 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-09 68.2 124 27.4
Phvul.010G078700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-09 68.2 120 30.0
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.4e-09 68.2 106 30.2
Lj1g0017175 Lotus japonicus HOM05D002777 ORTHO05D001516 1.8e-09 67.8 116 28.4
Lj5g0003150 Lotus japonicus HOM05D002777 ORTHO05D001516 1.8e-09 67.8 198 24.2
Atru.chr2.3312 Acer truncatum HOM05D016018 ORTHO05D017146 2.4e-09 67.4 118 30.5
Lj6g0012162 Lotus japonicus HOM05D002777 ORTHO05D001516 3.1e-09 67.0 123 28.5
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 4.1e-09 66.6 131 30.5
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 4.1e-09 66.6 104 32.7
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 5.3e-09 66.2 108 29.6
Lj2g0011303 Lotus japonicus HOM05D002777 ORTHO05D001516 9.1e-09 65.5 107 31.8
EL10Ac4g10257 Beta vulgaris HOM05D008976 ORTHO05D011121 1.5e-08 64.7 117 33.3
Phvul.011G184000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.5e-08 64.7 112 27.7
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.0e-08 64.3 190 27.4
Lj2g0021049 Lotus japonicus HOM05D002777 ORTHO05D001516 2.0e-08 64.3 129 29.5
RhsimUnG0173600 Rhododendron simsii HOM05D008219 ORTHO05D030892 2.0e-08 64.3 82 37.8
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.4e-08 63.5 127 29.9
Actinidia12328 Actinidia chinensis HOM05D008219 ORTHO05D009356 4.5e-08 63.2 117 30.8
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.5e-08 63.2 106 31.1
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.5e-08 63.2 106 32.1
COL.COLO4_36343 Corchorus olitorius HOM05D009258 ORTHO05D009583 5.9e-08 62.8 106 31.1
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.9e-08 62.8 155 27.7
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 5.9e-08 62.8 106 31.1
Lj3g0019514 Lotus japonicus HOM05D002777 ORTHO05D001516 7.7e-08 62.4 104 30.8
vmacro07030 Vaccinium macrocarpon HOM05D028517 ORTHO05D030532 7.7e-08 62.4 313 25.2
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 7.7e-08 62.4 322 23.9
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 1.0e-07 62.0 240 23.8
Lj2g0018575 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-07 62.0 105 28.6
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.3e-07 61.6 239 24.3
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.3e-07 61.6 218 25.2
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.3e-07 61.6 196 28.1
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-07 61.2 106 26.4
Phvul.003G023200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-07 61.2 117 27.4
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.2e-07 60.8 243 23.5
Lj6g0028179 Lotus japonicus HOM05D002777 ORTHO05D001516 2.2e-07 60.8 129 29.5
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.2e-07 60.8 104 30.8
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 2.9e-07 60.5 109 30.3
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.9e-07 60.5 112 29.5
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.9e-07 60.5 71 35.2
Rhsim02G0177400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-07 60.1 39 61.5
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 5.0e-07 59.7 113 31.9
EL10Ac3g05379 Beta vulgaris HOM05D008976 ORTHO05D011121 5.0e-07 59.7 136 32.4
EL10Ac4g09831 Beta vulgaris HOM05D008976 ORTHO05D011121 5.0e-07 59.7 137 29.9
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 5.0e-07 59.7 108 29.6
COL.COLO4_37719 Corchorus olitorius HOM05D008263 ORTHO05D009583 5.0e-07 59.7 186 28.5
Lj4g0011576 Lotus japonicus HOM05D002777 ORTHO05D001516 5.0e-07 59.7 114 26.3
Lalb_Chr01g0012751 Lupinus albus HOM05D002777 ORTHO05D001516 5.0e-07 59.7 105 27.6
Lj3g0016954 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-06 58.5 123 27.6
EL10Ac1g00331 Beta vulgaris HOM05D008976 ORTHO05D011121 1.4e-06 58.2 107 29.9
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-06 57.8 121 24.8
Lj3g0022675 Lotus japonicus HOM05D002777 ORTHO05D001516 1.9e-06 57.8 98 30.6
Ah.03g144970 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.5e-06 57.4 238 21.8
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.5e-06 57.4 186 24.2
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-06 57.4 121 24.8
Lj2g0014793 Lotus japonicus HOM05D002777 ORTHO05D001516 3.2e-06 57.0 116 25.9
EL10Ac4g09899 Beta vulgaris HOM05D008976 ORTHO05D011121 4.2e-06 56.6 125 26.4
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.2e-06 56.6 198 23.7
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 4.2e-06 56.6 251 22.3
vmacro03674 Vaccinium macrocarpon HOM05D002950 ORTHO05D006701 4.2e-06 56.6 65 35.4
Potri.003G014056 Populus trichocarpa HOM05D002777 ORTHO05D001516 5.5e-06 56.2 110 25.5
HanXRQChr10g0309431 Helianthus annuus HOM05D003915 ORTHO05D005386 7.2e-06 55.8 116 30.2
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 7.2e-06 55.8 121 24.0
LjContig00081g0007509 Lotus japonicus HOM05D002777 ORTHO05D001516 9.4e-06 55.5 104 26.9


User provided reference genes

Program Settings