Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14240 Vaccinium macrocarpon HOM05D005374 ORTHO05D006534 7.2e-72 273.9 144 100.0
Rhsim07G0140100 Rhododendron simsii HOM05D005374 ORTHO05D006534 3.3e-40 168.7 117 83.8
Glyma.01G154100 Glycine max HOM05D005374 ORTHO05D006534 3.4e-29 132.1 122 62.3
Glyma.11G090700 Glycine max HOM05D005374 ORTHO05D006534 1.4e-27 126.7 122 60.7
CSS0021507 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 5.4e-27 124.8 142 57.0
Lsat_1_v5_gn_6_17221 Lactuca sativa HOM05D005374 ORTHO05D006534 1.6e-26 123.2 114 62.3
GSVIVG01036874001 Vitis vinifera HOM05D005374 ORTHO05D006534 2.1e-26 122.9 116 63.8
Lj2g0008244 Lotus japonicus HOM05D005374 ORTHO05D006534 6.0e-26 121.3 126 55.6
Actinidia14732 Actinidia chinensis HOM05D005374 ORTHO05D006534 7.8e-26 120.9 149 55.0
Nn1g09345 Nelumbo nucifera HOM05D005374 ORTHO05D006534 7.8e-26 120.9 122 61.5
Prupe.1G353600 Prunus persica HOM05D005374 ORTHO05D006534 5.1e-25 118.2 120 60.0
arahy.Tifrunner.gnm1.ann1.B0SCIB Arachis hypogaea HOM05D005374 ORTHO05D006534 6.6e-25 117.9 126 54.8
arahy.Tifrunner.gnm1.ann1.BM6K92 Arachis hypogaea HOM05D005374 ORTHO05D006534 6.6e-25 117.9 126 54.8
Nn7g37386 Nelumbo nucifera HOM05D005374 ORTHO05D006534 8.7e-25 117.5 122 59.0
TPR.G8985 Trifolium pratense HOM05D005374 ORTHO05D006534 1.5e-24 116.7 132 54.5
TAR629G3354 Trochodendron aralioides HOM05D005374 ORTHO05D006534 1.5e-24 116.7 121 59.5
Dinv37427 Davidia involucrata HOM05D005374 ORTHO05D006534 1.9e-24 116.3 145 51.7
CSS0025693 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 3.3e-24 115.5 113 63.7
Ca_25046_v3 Cicer arietinum L. HOM05D005374 ORTHO05D006534 4.3e-24 115.2 124 54.8
Lalb_Chr16g0380381 Lupinus albus HOM05D005374 ORTHO05D006534 4.3e-24 115.2 123 55.3
Lj8A3T11 Lonicera japonica HOM05D005374 ORTHO05D006534 7.3e-24 114.4 128 53.9
Phvul.002G121600 Phaseolus vulgaris HOM05D005374 ORTHO05D006534 7.3e-24 114.4 122 56.6
ClCG11G016070 Citrullus lanatus HOM05D005374 ORTHO05D006534 1.2e-23 113.6 122 54.9
MELO3C010523.2 Cucumis melo HOM05D005374 ORTHO05D006534 1.2e-23 113.6 120 55.0
CsaV3_4G027900 Cucumis sativus L. HOM05D005374 ORTHO05D006534 1.2e-23 113.6 120 55.0
Psat2g145440 Pisum sativum HOM05D005374 ORTHO05D006534 3.6e-23 112.1 124 54.8
HanXRQChr17g0558081 Helianthus annuus HOM05D005374 ORTHO05D006534 4.7e-23 111.7 113 60.2
Sc22g0002240 Simmondsia chinensis HOM05D005374 ORTHO05D006534 8.1e-23 110.9 141 49.6
Cpa.g.c37165 Carica papaya HOM05D005374 ORTHO05D006534 1.4e-22 110.2 118 57.6
VMungo1215G0733 Vigna mungo HOM05D005374 ORTHO05D006534 3.1e-22 109.0 122 54.1
Sed0016570 Sechium edule HOM05D005374 ORTHO05D006534 4.0e-22 108.6 117 55.6
Dinv41805 Davidia involucrata HOM05D005374 ORTHO05D006534 5.2e-22 108.2 152 52.0
FvH4_2g37370 Fragaria vesca HOM05D005374 ORTHO05D006534 5.2e-22 108.2 133 49.6
FAN20G2320 Fragaria x ananassa HOM05D005374 ORTHO05D006534 5.2e-22 108.2 133 49.6
FAN27G3004 Fragaria x ananassa HOM05D005374 ORTHO05D006534 5.2e-22 108.2 133 49.6
Medtr5g025560 Medicago truncatula HOM05D005374 ORTHO05D006534 5.2e-22 108.2 124 54.8
FAN15G3753 Fragaria x ananassa HOM05D005374 ORTHO05D006534 6.9e-22 107.8 133 49.6
Sabra01G0180500 Salix brachista HOM05D005374 ORTHO05D006534 1.5e-21 106.7 120 55.0
CiPaw.11G074900 Carya illinoinensis HOM05D005374 ORTHO05D006534 2.0e-21 106.3 119 57.1
Atru.chr8.2626 Acer truncatum HOM05D005374 ORTHO05D006534 2.6e-21 105.9 113 57.5
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 2.6e-21 105.9 113 55.8
RcHm_v2.0_Chr6g0304341 Rosa chinensis HOM05D005374 ORTHO05D006534 4.4e-21 105.1 133 48.9
TAR629G2486 Trochodendron aralioides HOM05D005374 ORTHO05D006534 4.4e-21 105.1 116 58.6
Cfa012294 Carpinus fangiana HOM05D005374 ORTHO05D006534 5.8e-21 104.8 131 55.0
Migut.A00528 Erythranthe guttata HOM05D005374 ORTHO05D006534 5.8e-21 104.8 174 42.5
Hma1.2p1_1841F.1_g304960 Hydrangea macrophylla HOM05D005374 ORTHO05D006534 7.6e-21 104.4 137 48.9
Aqoxy3G00850 Aquilegia oxysepala HOM05D005374 ORTHO05D006534 1.3e-20 103.6 122 52.5
EL10Ac5g12585 Beta vulgaris HOM05D005374 ORTHO05D006534 2.9e-20 102.4 130 50.0
unitig_747.g21918 Utricularia gibba HOM05D005374 ORTHO05D006534 2.9e-20 102.4 178 42.1
Ciclev10012169m.g Citrus clementina HOM05D005374 ORTHO05D006534 6.4e-20 101.3 130 52.3
Ah.12g058460 Amaranthus hybridus HOM05D005374 ORTHO05D006534 8.4e-20 100.9 133 52.6
AL8G13440 Arabidopsis lyrata HOM05D005374 ORTHO05D006534 1.4e-19 100.1 117 51.3
AT5G45360 Arabidopsis thaliana HOM05D005374 ORTHO05D006534 3.2e-19 99.0 116 50.9
Oeu015544.1 Olea europaea HOM05D005374 ORTHO05D006534 3.2e-19 99.0 183 40.4
TWI18G0367 Tripterygium wilfordii HOM05D005374 ORTHO05D006534 7.1e-19 97.8 135 50.4
AUR62010482 Chenopodium quinoa HOM05D005374 ORTHO05D006534 9.3e-19 97.4 133 48.1
BcaB07g30892 Brassica carinata HOM05D005374 ORTHO05D006534 1.2e-18 97.1 113 50.4
COL.COLO4_16753 Corchorus olitorius HOM05D005374 ORTHO05D006534 1.6e-18 96.7 142 49.3
Thhalv10000968m.g Eutrema salsugineum HOM05D005374 ORTHO05D006534 1.6e-18 96.7 116 50.9
CAN.G884.8 Capsicum annuum HOM05D005374 ORTHO05D006534 2.1e-18 96.3 158 46.8
CDE02G3607 Ceratophyllum demersum HOM05D005374 ORTHO05D006534 3.5e-18 95.5 118 48.3
PGR031G1488 Punica granatum HOM05D005374 ORTHO05D006534 4.6e-18 95.1 124 51.6
Thecc.03G319500 Theobroma cacao HOM05D005374 ORTHO05D006534 4.6e-18 95.1 140 50.0
MD15G1000900 Malus domestica HOM05D005374 ORTHO05D006534 6.0e-18 94.7 136 44.1
QL12p004193 Quercus lobata HOM05D005374 ORTHO05D006534 6.0e-18 94.7 109 54.1
AUR62030411 Chenopodium quinoa HOM05D005374 ORTHO05D006534 7.8e-18 94.4 135 43.7
BcaC06g34439 Brassica carinata HOM05D005374 ORTHO05D006534 1.0e-17 94.0 118 49.2
C07p28440 Brassica napus HOM05D005374 ORTHO05D006534 1.0e-17 94.0 118 49.2
Aa31LG9G7650 Aethionema arabicum HOM05D005374 ORTHO05D006534 1.7e-17 93.2 121 47.9
Carub.0008s0275 Capsella rubella HOM05D005374 ORTHO05D006534 2.3e-17 92.8 118 50.8
Manes.15G191300 Manihot esculenta HOM05D005374 ORTHO05D006534 2.3e-17 92.8 131 45.8
CARHR176710 Cardamine hirsuta HOM05D005374 ORTHO05D006534 3.0e-17 92.4 123 48.0
Sp2g10310 Schrenkiella parvula HOM05D005374 ORTHO05D006534 3.0e-17 92.4 116 51.7
THA.LOC104811099 Tarenaya hassleriana HOM05D005374 ORTHO05D006534 3.0e-17 92.4 155 43.2
MSTRG.11863 Avicennia marina HOM05D005374 ORTHO05D006534 3.9e-17 92.0 182 38.5
ATR0568G167 Amborella trichopoda HOM05D005374 ORTHO05D006534 5.1e-17 91.7 147 46.3
Hund14303 Selenicereus undatus HOM05D005374 ORTHO05D006534 5.1e-17 91.7 157 41.4
BolC7t43384H Brassica oleracea HOM05D005374 ORTHO05D006534 6.6e-17 91.3 118 48.3
Gohir.D12G204500 Gossypium hirsutum HOM05D005374 ORTHO05D006534 6.6e-17 91.3 139 46.8
SGA_v2.0_scaffold89G27377 Striga asiatica HOM05D005374 ORTHO05D006534 6.6e-17 91.3 181 39.2
Duzib084G1112 Durio zibethinus HOM05D005374 ORTHO05D006534 1.1e-16 90.5 136 48.5
Eucgr.E01146 Eucalyptus grandis HOM05D005374 ORTHO05D006534 1.5e-16 90.1 115 50.4
Oeu046780.1 Olea europaea HOM05D005374 ORTHO05D006534 2.5e-16 89.4 187 36.9
BraA06t27536Z Brassica rapa HOM05D005374 ORTHO05D006534 9.6e-16 87.4 119 48.7
Potri.004G236200 Populus trichocarpa HOM05D005374 ORTHO05D006534 1.3e-15 87.0 128 45.3
Gorai.008G219400 Gossypium raimondii HOM05D005374 ORTHO05D006534 1.6e-15 86.7 128 47.7
Gohir.A12G201800 Gossypium hirsutum HOM05D005374 ORTHO05D006534 2.1e-15 86.3 129 47.3
PGSC0003DMG400018477 Solanum tuberosum HOM05D005374 ORTHO05D006534 2.1e-15 86.3 186 39.8
DCAR_004533 Daucus carota HOM05D005374 ORTHO05D006534 2.8e-15 85.9 139 43.2
Nitab4.5_0006438g0020 Nicotiana tabacum HOM05D005374 ORTHO05D006534 2.8e-15 85.9 186 38.7
BcaC04g21776 Brassica carinata HOM05D005374 ORTHO05D006534 4.8e-15 85.1 119 48.7
C09p27770 Brassica napus HOM05D005374 ORTHO05D006534 4.8e-15 85.1 119 48.7
Actinidia26790 Actinidia chinensis HOM05D005374 ORTHO05D006534 1.1e-14 84.0 117 53.0
A09p21700 Brassica napus HOM05D005374 ORTHO05D006534 1.4e-14 83.6 121 44.6
BcaC06g31556 Brassica carinata HOM05D005374 ORTHO05D006534 2.4e-14 82.8 118 46.6
Cc08_g05810 Coffea canephora HOM05D005374 ORTHO05D006534 2.4e-14 82.8 50 78.0
Nitab4.5_0001175g0180 Nicotiana tabacum HOM05D005374 ORTHO05D006534 3.1e-14 82.4 183 38.3
Peaxi162Scf00045g00731 Petunia axillaris HOM05D005374 ORTHO05D006534 6.9e-14 81.3 50 72.0
THA.LOC104811124 Tarenaya hassleriana HOM05D005374 ORTHO05D006534 9.0e-14 80.9 91 53.8
Zm00001eb227600 Zea mays HOM05D005374 ORTHO05D006534 9.0e-14 80.9 133 42.1
Peaxi162Scf00193g00717 Petunia axillaris HOM05D005374 ORTHO05D006534 1.2e-13 80.5 50 70.0
HPP92_022746 Vanilla planifolia HOM05D005374 ORTHO05D006534 1.5e-13 80.1 108 46.3
SEGI_04185 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 2.0e-13 79.7 167 37.1
A06p46630 Brassica napus HOM05D005374 ORTHO05D006534 2.6e-13 79.3 121 46.3
Duzib205G0577 Durio zibethinus HOM05D005374 ORTHO05D006534 2.6e-13 79.3 128 46.1
SalBow8G5130 Salvia bowleyana HOM05D005374 ORTHO05D006534 2.6e-13 79.3 170 38.2
Nitab4.5_0002244g0130 Nicotiana tabacum HOM05D005374 ORTHO05D006534 3.4e-13 79.0 69 56.5
MBI04_g06277_MAGBIO Magnolia biondii HOM05D005374 ORTHO05D006534 4.5e-13 78.6 209 33.0
Solyc08g075380.3 Solanum lycopersicum HOM05D005374 ORTHO05D006534 1.3e-12 77.0 69 53.6
Sopen08g024010 Solanum pennellii HOM05D005374 ORTHO05D006534 1.3e-12 77.0 69 53.6
PGSC0003DMG400001963 Solanum tuberosum HOM05D005374 ORTHO05D006534 1.3e-12 77.0 69 53.6
CAN.G1511.1 Capsicum annuum HOM05D005374 ORTHO05D006534 2.2e-12 76.3 47 70.2
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 2.9e-12 75.9 128 38.3
DCAR_000721 Daucus carota HOM05D005374 ORTHO05D006534 3.8e-12 75.5 63 54.0
PSO541G3556 Papaver somniferum HOM05D005374 ORTHO05D006534 8.4e-12 74.3 45 73.3
Haze_08435 Corylus avellana HOM05D005374 ORTHO05D006534 4.2e-11 72.0 113 46.9
Pp3c9_17990 Physcomitrium patens HOM05D005374 ORTHO05D006534 1.3e-09 67.0 118 40.7
Mapoly0004s0051 Marchantia polymorpha HOM05D005374 ORTHO05D006534 3.3e-08 62.4 111 40.5
SMO353G0174 Selaginella moellendorffii HOM05D005374 ORTHO05D006534 4.3e-08 62.0 50 56.0
CBR_g46850 Chara braunii HOM05D005374 ORTHO05D006534 8.1e-07 57.8 99 42.4
SEGI_09240 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 9.0e-06 54.3 131 36.6


User provided reference genes

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