Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 2.6e-211 738.4 367 100.0
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 4.7e-75 285.8 370 49.7
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 5.2e-66 255.8 369 45.0
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 5.2e-66 255.8 365 45.5
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 3.5e-62 243.0 365 43.8
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 4.3e-60 236.1 369 43.9
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 8.0e-59 231.9 366 41.5
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 3.0e-58 229.9 366 41.0
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 2.0e-54 217.2 360 41.1
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 2.7e-54 216.9 363 40.2
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 4.6e-54 216.1 362 40.6
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 1.7e-53 214.2 365 39.7
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 1.9e-52 210.7 362 40.6
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 2.5e-52 210.3 368 40.5
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 9.5e-52 208.4 360 39.2
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 4.0e-50 203.0 364 39.0
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 6.8e-50 202.2 360 39.4
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 1.2e-49 201.4 360 39.4
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 1.5e-49 201.1 360 38.9
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 2.6e-49 200.3 365 38.4
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 3.4e-49 199.9 365 37.0
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 3.4e-49 199.9 360 38.9
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 5.8e-49 199.1 373 38.1
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 7.5e-49 198.7 359 38.7
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.3e-48 198.0 360 38.1
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.3e-48 198.0 360 38.1
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 1.3e-48 198.0 368 38.6
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 1.7e-48 197.6 369 38.2
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 1.7e-48 197.6 368 38.0
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.9e-48 196.8 360 37.8
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 3.7e-48 196.4 366 38.0
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 6.4e-48 195.7 369 37.9
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 6.4e-48 195.7 361 38.2
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 1.4e-47 194.5 360 37.5
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 1.4e-47 194.5 366 38.3
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 1.4e-47 194.5 370 37.8
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 1.9e-47 194.1 368 38.0
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.4e-47 193.7 360 37.5
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 3.2e-47 193.4 370 38.1
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 3.2e-47 193.4 361 37.7
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 4.1e-47 193.0 369 37.7
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 4.1e-47 193.0 370 38.6
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 4.1e-47 193.0 364 38.2
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 5.4e-47 192.6 362 37.6
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 7.0e-47 192.2 370 37.0
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 9.2e-47 191.8 360 37.2
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.2e-46 191.4 362 37.3
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.2e-46 191.4 362 37.3
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 1.2e-46 191.4 365 36.7
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.6e-46 191.0 360 37.2
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.6e-46 191.0 362 37.3
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.7e-46 190.3 360 37.2
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 6.0e-46 189.1 369 37.4
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 1.3e-45 188.0 362 36.7
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 2.3e-45 187.2 369 37.4
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 3.0e-45 186.8 370 37.3
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 3.0e-45 186.8 369 37.4
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 3.9e-45 186.4 363 37.2
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 8.6e-45 185.3 368 37.0
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 8.6e-45 185.3 371 37.7
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 1.5e-44 184.5 361 38.5
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 1.5e-44 184.5 361 37.7
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.9e-44 184.1 137 67.2
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.9e-44 184.1 137 67.2
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 5.6e-44 182.6 364 37.1
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 9.5e-44 181.8 361 36.8
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 1.2e-43 181.4 361 35.7
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 2.1e-43 180.6 366 36.3
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 2.8e-43 180.3 369 36.0
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 2.8e-43 180.3 364 36.8
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 3.6e-43 179.9 360 35.3
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 3.6e-43 179.9 362 36.5
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 6.2e-43 179.1 364 36.8
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.8e-42 177.6 352 36.4
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 2.3e-42 177.2 359 36.8
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 3.1e-42 176.8 364 36.8
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 4.0e-42 176.4 361 35.7
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 4.0e-42 176.4 367 36.2
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 5.2e-42 176.0 362 36.2
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 8.9e-42 175.3 365 35.6
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 1.2e-41 174.9 352 35.8
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 1.2e-41 174.9 365 35.6
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.2e-41 174.9 371 35.6
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.5e-41 174.5 366 36.6
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 1.5e-41 174.5 365 35.6
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 1.5e-41 174.5 365 35.6
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 1.5e-41 174.5 362 36.2
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 2.6e-41 173.7 362 35.1
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 3.4e-41 173.3 373 35.1
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 3.4e-41 173.3 373 35.1
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 3.4e-41 173.3 360 35.3
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 5.8e-41 172.6 369 35.2
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 5.8e-41 172.6 354 36.2
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 7.5e-41 172.2 364 34.3
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 1.3e-40 171.4 368 35.9
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 8.3e-40 168.7 365 35.3
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 4.1e-39 166.4 364 34.6
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 9.2e-39 165.2 365 34.0
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.1e-38 164.1 126 65.9
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 6.0e-38 162.5 333 34.2
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 1.0e-37 161.8 361 32.7
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 2.3e-37 160.6 134 61.2
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 3.0e-37 160.2 133 61.7
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 5.1e-37 159.5 126 64.3
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 3.3e-36 156.8 378 34.7
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 4.7e-35 152.9 324 35.5
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 6.8e-34 149.1 350 32.6
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 4.1e-31 139.8 128 58.6
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.7e-29 134.4 126 57.1
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 1.6e-27 127.9 304 34.2
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 8.1e-27 125.6 103 60.2
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 5.2e-26 122.9 345 31.3
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 4.6e-22 109.8 360 26.7
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.3e-21 108.2 127 48.0
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.9e-21 106.7 73 78.1
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 5.1e-21 106.3 68 79.4
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 7.3e-20 102.4 99 57.6
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 3.6e-19 100.1 280 31.4
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 4.8e-19 99.8 75 74.7
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 1.2e-17 95.1 127 43.3
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 9.9e-17 92.0 286 31.1
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 3.8e-16 90.1 76 64.5
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 6.4e-16 89.4 79 55.7
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.4e-15 88.2 72 68.1
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 2.3e-13 80.9 55 70.9
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 1.9e-12 77.8 64 64.1
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 5.6e-12 76.3 128 39.1
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 5.6e-12 76.3 53 67.9
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 5.3e-10 69.7 46 73.9
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 1.3e-08 65.1 70 50.0


User provided reference genes

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