Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14172 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 4.7e-55 217.6 109 100.0
vmacro14832 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 7.7e-50 200.3 106 94.3
vmacro10657 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 6.7e-38 160.6 81 93.8
vmacro03413 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.7e-36 156.0 106 76.4
vmacro14863 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 2.0e-34 149.1 78 89.7
Rhsim01G0268700 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.8e-30 136.0 79 79.7
Rhsim01G0268800 Rhododendron simsii HOM05D001789 ORTHO05D001755 8.8e-30 133.7 79 81.0
vmacro07946 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 3.4e-29 131.7 83 78.3
CSS0005239 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 1.6e-23 112.8 76 67.1
Dinv34576 Davidia involucrata HOM05D001789 ORTHO05D010416 1.5e-21 106.3 79 64.6
Manes.05G085350 Manihot esculenta HOM05D001789 ORTHO05D001755 6.1e-15 84.3 79 49.4
Sabra05G0168200 Salix brachista HOM05D001789 ORTHO05D001755 2.3e-14 82.4 74 48.6
Manes.05G085300 Manihot esculenta HOM05D001789 ORTHO05D001755 6.8e-14 80.9 79 46.8
Potri.005G219201 Populus trichocarpa HOM05D001789 ORTHO05D001755 3.4e-13 78.6 73 49.3
PSO384G1410 Papaver somniferum HOM05D001789 ORTHO05D001755 5.8e-13 77.8 76 50.0
FvH4_6g02680 Fragaria vesca HOM05D001789 ORTHO05D001755 9.8e-13 77.0 78 47.4
FAN02G1989 Fragaria x ananassa HOM05D001789 ORTHO05D001755 1.3e-12 76.6 78 47.4
FAN09G2804 Fragaria x ananassa HOM05D001789 ORTHO05D001755 1.3e-12 76.6 78 47.4
PSO017G4820 Papaver somniferum HOM05D001789 ORTHO05D001755 1.3e-12 76.6 74 52.7
Os05g0103600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.7e-12 76.3 77 49.4
PSO339G1265 Papaver somniferum HOM05D001789 ORTHO05D001755 1.7e-12 76.3 75 49.3
PSO339G5673 Papaver somniferum HOM05D001789 ORTHO05D001755 1.7e-12 76.3 76 48.7
Cpa.g.sc617.3 Carica papaya HOM05D001789 ORTHO05D001755 2.2e-12 75.9 79 45.6
Cc02_g30810 Coffea canephora HOM05D001789 ORTHO05D001755 2.2e-12 75.9 75 52.0
MSTRG.20457 Avicennia marina HOM05D001789 ORTHO05D001755 2.9e-12 75.5 73 49.3
RcHm_v2.0_Chr3g0450651 Rosa chinensis HOM05D001789 ORTHO05D001755 3.7e-12 75.1 78 46.2
PSO017G4575 Papaver somniferum HOM05D001789 ORTHO05D001755 4.9e-12 74.7 71 53.5
QL12p018052 Quercus lobata HOM05D001789 ORTHO05D001755 4.9e-12 74.7 80 46.2
Haze_04373 Corylus avellana HOM05D001789 ORTHO05D001755 6.4e-12 74.3 75 46.7
CDE06G0784 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 8.3e-12 73.9 75 46.7
PSO017G0677 Papaver somniferum HOM05D001789 ORTHO05D001755 1.4e-11 73.2 71 52.1
EL10Ac5g10456 Beta vulgaris HOM05D001789 ORTHO05D001755 1.9e-11 72.8 82 46.3
Duzib128G1133 Durio zibethinus HOM05D001789 ORTHO05D001755 1.9e-11 72.8 78 44.9
COL.COLO4_15370 Corchorus olitorius HOM05D001789 ORTHO05D001755 3.2e-11 72.0 78 44.9
Sed0022842 Sechium edule HOM05D001789 ORTHO05D001755 4.1e-11 71.6 75 45.3
Thhalv10020698m.g Eutrema salsugineum HOM05D001789 ORTHO05D001755 5.4e-11 71.2 75 44.0
PSO478G4273 Papaver somniferum HOM05D001789 ORTHO05D001755 7.0e-11 70.9 71 49.3
Atru.chr2.837 Acer truncatum HOM05D001789 ORTHO05D001755 9.2e-11 70.5 75 45.3
ECA238G2814 Erigeron canadensis HOM05D001789 ORTHO05D001755 9.2e-11 70.5 73 47.9
PSO384G4611 Papaver somniferum HOM05D001789 ORTHO05D001755 1.2e-10 70.1 73 45.2
BcaC01g04353 Brassica carinata HOM05D001789 ORTHO05D001755 1.6e-10 69.7 70 47.1
A03p33800 Brassica napus HOM05D001789 ORTHO05D001755 1.6e-10 69.7 70 47.1
BraA01t04507Z Brassica rapa HOM05D001789 ORTHO05D001755 1.6e-10 69.7 67 49.3
Lj2A1158T42 Lonicera japonica HOM05D001789 ORTHO05D001755 1.6e-10 69.7 74 45.9
SalBow8G1668 Salvia bowleyana HOM05D001789 ORTHO05D001755 1.6e-10 69.7 74 44.6
CsaV3_2G003990 Cucumis sativus L. HOM05D001789 ORTHO05D001755 2.0e-10 69.3 75 44.0
PSO675G8957 Papaver somniferum HOM05D001789 ORTHO05D001755 2.0e-10 69.3 71 50.7
Psat0s1144g0120 Pisum sativum HOM05D001789 ORTHO05D001755 2.0e-10 69.3 78 42.3
Gohir.A13G169500 Gossypium hirsutum HOM05D001789 ORTHO05D001755 2.7e-10 68.9 71 46.5
Gohir.D13G175000 Gossypium hirsutum HOM05D001789 ORTHO05D001755 2.7e-10 68.9 71 46.5
Gorai.013G200300 Gossypium raimondii HOM05D001789 ORTHO05D001755 2.7e-10 68.9 71 46.5
Nn1g02587 Nelumbo nucifera HOM05D001789 ORTHO05D001755 2.7e-10 68.9 78 42.3
unitig_37.g12638 Utricularia gibba HOM05D001789 ORTHO05D001755 2.7e-10 68.9 75 44.0
Ciclev10028402m.g Citrus clementina HOM05D001789 ORTHO05D001755 3.5e-10 68.6 78 43.6
MELO3C004392.2 Cucumis melo HOM05D001789 ORTHO05D001755 3.5e-10 68.6 75 44.0
Sp3g03550 Schrenkiella parvula HOM05D001789 ORTHO05D001755 3.5e-10 68.6 76 42.1
THA.LOC104821668 Tarenaya hassleriana HOM05D001789 ORTHO05D001755 3.5e-10 68.6 76 43.4
Peaxi162Scf00282g00618 Petunia axillaris HOM05D001789 ORTHO05D001755 4.6e-10 68.2 68 48.5
Solyc01g097190.4 Solanum lycopersicum HOM05D001789 ORTHO05D001755 4.6e-10 68.2 75 46.7
Oeu016446.1 Olea europaea HOM05D001789 ORTHO05D000116 6.0e-10 67.8 75 46.7
Psat4g049680 Pisum sativum HOM05D001789 ORTHO05D001755 6.0e-10 67.8 79 40.5
Potri.005G054800 Populus trichocarpa HOM05D001789 ORTHO05D001755 6.0e-10 67.8 78 42.3
Sopen01g040860 Solanum pennellii HOM05D001789 ORTHO05D001755 6.0e-10 67.8 75 46.7
C03p41100 Brassica napus HOM05D001789 ORTHO05D001755 7.8e-10 67.4 70 47.1
PSO017G4312 Papaver somniferum HOM05D001789 ORTHO05D001755 7.8e-10 67.4 77 45.5
Aqoxy3G02736 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.0e-09 67.0 75 42.7
PSO421G0436 Papaver somniferum HOM05D001789 ORTHO05D001755 1.0e-09 67.0 76 39.5
Solyc01g097220.3 Solanum lycopersicum HOM05D001789 ORTHO05D001755 1.0e-09 67.0 73 46.6
Sopen01g040890 Solanum pennellii HOM05D001789 ORTHO05D001755 1.0e-09 67.0 73 46.6
TAR636G0648 Trochodendron aralioides HOM05D001789 ORTHO05D001755 1.0e-09 67.0 72 45.8
BcaB04g21349 Brassica carinata HOM05D001789 ORTHO05D001755 1.3e-09 66.6 73 42.5
Medtr7g115280 Medicago truncatula HOM05D001789 ORTHO05D001755 1.3e-09 66.6 78 41.0
PSO384G0184 Papaver somniferum HOM05D001789 ORTHO05D001755 1.3e-09 66.6 67 47.8
CARHR078940 Cardamine hirsuta HOM05D001789 ORTHO05D001755 1.7e-09 66.2 71 42.3
COL.COLO4_08283 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.7e-09 66.2 89 36.0
Lalb_Chr18g0043931 Lupinus albus HOM05D001789 ORTHO05D001755 1.7e-09 66.2 78 39.7
BcaC09g47780 Brassica carinata HOM05D001789 ORTHO05D001755 2.3e-09 65.9 67 46.3
BNapus_Darmor_BZH_scaffold_78p00990 Brassica napus HOM05D001789 ORTHO05D001755 2.3e-09 65.9 67 46.3
Zm00001eb356200 Zea mays HOM05D001789 ORTHO05D001755 2.3e-09 65.9 77 45.5
Aa31LG5G15100 Aethionema arabicum HOM05D001789 ORTHO05D001755 3.0e-09 65.5 52 55.8
AL3G14790 Arabidopsis lyrata HOM05D001789 ORTHO05D001755 3.0e-09 65.5 76 39.5
Carub.0003s0386 Capsella rubella HOM05D001789 ORTHO05D001755 3.0e-09 65.5 76 39.5
ClCG02G016750 Citrullus lanatus HOM05D001789 ORTHO05D001755 3.0e-09 65.5 95 38.9
Migut.B01098 Erythranthe guttata HOM05D001789 ORTHO05D001755 3.0e-09 65.5 73 43.8
PSO384G2589 Papaver somniferum HOM05D001789 ORTHO05D001755 3.0e-09 65.5 69 43.5
Actinidia21164 Actinidia chinensis HOM05D001789 ORTHO05D001755 3.9e-09 65.1 79 43.0
AT3G04710 Arabidopsis thaliana HOM05D001789 ORTHO05D001755 3.9e-09 65.1 76 39.5
AUR62032245 Chenopodium quinoa HOM05D001789 ORTHO05D001755 3.9e-09 65.1 80 42.5
Cc01_g18750 Coffea canephora HOM05D001789 ORTHO05D001755 3.9e-09 65.1 80 43.8
PSO675G5049 Papaver somniferum HOM05D001789 ORTHO05D001755 3.9e-09 65.1 75 37.3
SalBow8G2035 Salvia bowleyana HOM05D001789 ORTHO05D001755 3.9e-09 65.1 74 41.9
AagrBONN_evm.TU.Sc2ySwM_368.3405 Anthoceros agrestis HOM05D001789 ORTHO05D001755 5.0e-09 64.7 73 42.5
Ca_09427_v3 Cicer arietinum L. HOM05D001789 ORTHO05D001755 5.0e-09 64.7 78 41.0
PSO063G5539 Papaver somniferum HOM05D001789 ORTHO05D001755 5.0e-09 64.7 71 43.7
PSO339G0965 Papaver somniferum HOM05D001789 ORTHO05D001755 5.0e-09 64.7 69 43.5
Manes.09G151500 Manihot esculenta HOM05D001789 ORTHO05D001755 6.6e-09 64.3 78 39.7
PSO591G0168 Papaver somniferum HOM05D001789 ORTHO05D001755 6.6e-09 64.3 78 43.6
TPR.G7003 Trifolium pratense HOM05D001789 ORTHO05D001755 6.6e-09 64.3 78 41.0
Glyma.03G247600 Glycine max HOM05D001789 ORTHO05D001755 8.6e-09 63.9 73 45.2
Os12g0600100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 8.6e-09 63.9 73 42.5
PSO170G3794 Papaver somniferum HOM05D001789 ORTHO05D001755 8.6e-09 63.9 67 46.3
PSO675G9018 Papaver somniferum HOM05D001789 ORTHO05D001755 8.6e-09 63.9 61 49.2
CAN.G134.77 Capsicum annuum HOM05D001789 ORTHO05D001755 1.1e-08 63.5 75 44.0
Cfa006403 Carpinus fangiana HOM05D001789 ORTHO05D001755 1.1e-08 63.5 71 46.5
PSO339G6309 Papaver somniferum HOM05D001789 ORTHO05D001755 1.1e-08 63.5 123 38.2
CAN.G134.81 Capsicum annuum HOM05D001789 ORTHO05D001755 1.5e-08 63.2 75 44.0
PSO478G0068 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-08 63.2 72 43.1
PSO832G3911 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-08 63.2 74 44.6
CANSAT54G0997 Cannabis sativa HOM05D001789 ORTHO05D001755 1.9e-08 62.8 78 39.7
COL.COLO4_03560 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.9e-08 62.8 70 44.3
Os02g0493300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.5e-08 62.4 69 46.4
HPP92_009631 Vanilla planifolia HOM05D001789 ORTHO05D001755 2.5e-08 62.4 76 40.8
arahy.Tifrunner.gnm1.ann1.JN9GN2 Arachis hypogaea HOM05D001789 ORTHO05D001755 3.3e-08 62.0 78 41.0
Lj1g0007033 Lotus japonicus HOM05D001789 ORTHO05D001755 3.3e-08 62.0 78 42.3
Os12g0599900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.3e-08 62.0 74 39.2
PSO017G2802 Papaver somniferum HOM05D001789 ORTHO05D001755 3.3e-08 62.0 92 39.1
PSO461G0078 Papaver somniferum HOM05D001789 ORTHO05D001755 3.3e-08 62.0 69 43.5
arahy.Tifrunner.gnm1.ann1.K1HEIP Arachis hypogaea HOM05D001789 ORTHO05D001755 4.3e-08 61.6 78 39.7
PSO675G1691 Papaver somniferum HOM05D001789 ORTHO05D001755 4.3e-08 61.6 75 37.3
PSO675G3161 Papaver somniferum HOM05D001789 ORTHO05D001755 4.3e-08 61.6 79 43.0
PSO675G7970 Papaver somniferum HOM05D001789 ORTHO05D001755 4.3e-08 61.6 65 47.7
Aqoxy4G01666 Aquilegia oxysepala HOM05D001053 ORTHO05D001755 5.6e-08 61.2 76 40.8
Aqoxy4G01760 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 5.6e-08 61.2 76 40.8
Aqoxy5G00331 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 5.6e-08 61.2 75 38.7
PSO210G1126 Papaver somniferum HOM05D001789 ORTHO05D001755 5.6e-08 61.2 74 36.5
PSO339G3442 Papaver somniferum HOM05D001789 ORTHO05D001755 5.6e-08 61.2 70 41.4
BcaB04g19305 Brassica carinata HOM05D001789 ORTHO05D001755 7.3e-08 60.8 70 41.4
Duzib138G0187 Durio zibethinus HOM05D001789 ORTHO05D001755 7.3e-08 60.8 80 36.2
Migut.D00382 Erythranthe guttata HOM05D001789 ORTHO05D001755 7.3e-08 60.8 72 38.9
PSO063G3347 Papaver somniferum HOM05D001789 ORTHO05D001755 7.3e-08 60.8 65 46.2
PSO675G2961 Papaver somniferum HOM05D001789 ORTHO05D001755 7.3e-08 60.8 71 43.7
Aqoxy2G03556 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 9.5e-08 60.5 77 36.4
Os02g0492000 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 9.5e-08 60.5 70 45.7
PSO081G0105 Papaver somniferum HOM05D001789 ORTHO05D001755 9.5e-08 60.5 70 40.0
Hund02888 Selenicereus undatus HOM05D001789 ORTHO05D001755 9.5e-08 60.5 69 46.4
Aqoxy3G03319 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.2e-07 60.1 76 40.8
COL.COLO4_08284 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.6e-07 59.7 69 42.0
PSO017G4288 Papaver somniferum HOM05D001789 ORTHO05D001755 1.6e-07 59.7 82 37.8
PSO063G6555 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-07 59.3 96 36.5
PSO170G3495 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-07 59.3 76 38.2
PSO675G4438 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-07 59.3 76 40.8
COL.COLO4_05094 Corchorus olitorius HOM05D001789 ORTHO05D001755 2.8e-07 58.9 73 39.7
PGSC0003DMG400019459 Solanum tuberosum HOM05D001789 ORTHO05D001755 2.8e-07 58.9 75 41.3
PGSC0003DMG400027510 Solanum tuberosum HOM05D001789 ORTHO05D001755 2.8e-07 58.9 75 40.0
AUR62001052 Chenopodium quinoa HOM05D001789 ORTHO05D001755 3.6e-07 58.5 78 39.7
AUR62004900 Chenopodium quinoa HOM05D001789 ORTHO05D001755 3.6e-07 58.5 78 39.7
Glyma.19G245700 Glycine max HOM05D001789 ORTHO05D001755 3.6e-07 58.5 73 41.1
COL.COLO4_05095 Corchorus olitorius HOM05D001789 ORTHO05D001755 4.7e-07 58.2 70 40.0
PGR004G2017 Punica granatum HOM05D001789 ORTHO05D001755 4.7e-07 58.2 73 41.1
VMungo0540G0629 Vigna mungo HOM05D001789 ORTHO05D001755 4.7e-07 58.2 73 41.1
Nitab4.5_0009495g0030 Nicotiana tabacum HOM05D001789 ORTHO05D001755 6.2e-07 57.8 45 60.0
PSO729G0190 Papaver somniferum HOM05D001789 ORTHO05D001755 8.0e-07 57.4 77 37.7
SGA_v2.0_scaffold36G14395 Striga asiatica HOM05D001789 ORTHO05D001755 8.0e-07 57.4 73 38.4
PSO729G0047 Papaver somniferum HOM05D001789 ORTHO05D001755 1.4e-06 56.6 72 30.6
Potri.013G042300 Populus trichocarpa HOM05D001789 ORTHO05D001755 1.4e-06 56.6 75 38.7
MD04G1226000 Malus domestica HOM05D001789 ORTHO05D001755 1.8e-06 56.2 76 39.5
PSO782G4460 Papaver somniferum HOM05D001789 ORTHO05D001755 1.8e-06 56.2 76 38.2
PSO017G7195 Papaver somniferum HOM05D001789 ORTHO05D001755 2.3e-06 55.8 71 42.3
Prupe.6G344800 Prunus persica HOM05D001789 ORTHO05D001755 2.3e-06 55.8 78 38.5
Zm00001eb031110 Zea mays HOM05D001789 ORTHO05D001755 2.3e-06 55.8 74 33.8
Nitab4.5_0006088g0040 Nicotiana tabacum HOM05D001789 ORTHO05D001755 3.1e-06 55.5 75 40.0
Thecc.05G281000 Theobroma cacao HOM05D001789 ORTHO05D001755 3.1e-06 55.5 78 35.9
Os09g0124800 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 4.0e-06 55.1 78 38.5
PSO782G1762 Papaver somniferum HOM05D001789 ORTHO05D001755 4.0e-06 55.1 76 36.8
PSO782G4634 Papaver somniferum HOM05D001789 ORTHO05D001755 4.0e-06 55.1 65 40.0
Ah.06g192110 Amaranthus hybridus HOM05D001789 ORTHO05D001755 5.2e-06 54.7 39 61.5
Aqoxy2G03554 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 5.2e-06 54.7 39 61.5
Manes.08G136000 Manihot esculenta HOM05D001789 ORTHO05D001755 5.2e-06 54.7 78 35.9
Phvul.006G102400 Phaseolus vulgaris HOM05D001789 ORTHO05D001755 5.2e-06 54.7 73 39.7
Psat1g193640 Pisum sativum HOM05D000088 ORTHO05D003056 5.2e-06 54.7 77 44.2
CSS0016190 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 6.8e-06 54.3 78 39.7
Lsat_1_v5_gn_2_64421 Lactuca sativa HOM05D001789 ORTHO05D001755 6.8e-06 54.3 75 38.7
TAR365G0302 Trochodendron aralioides HOM05D001789 ORTHO05D001755 6.8e-06 54.3 39 61.5


User provided reference genes

Program Settings