Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 8.1e-274 946.4 466 100.0
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 6.4e-170 601.3 465 66.9
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.4e-156 557.0 472 61.4
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 2.4e-156 556.2 472 61.4
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 3.8e-154 548.9 471 60.7
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 5.6e-150 535.0 470 60.0
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 3.8e-146 522.3 469 57.6
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 4.6e-128 462.2 464 53.0
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 3.1e-124 449.5 451 52.5
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.1e-121 441.0 464 50.9
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 2.1e-120 436.8 462 51.5
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 2.3e-119 433.3 463 49.2
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 3.9e-119 432.6 466 50.9
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 5.1e-119 432.2 475 49.9
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 6.7e-119 431.8 449 51.2
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 2.5e-118 429.9 475 49.5
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 4.3e-118 429.1 453 50.1
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 1.7e-117 427.2 462 50.0
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 3.1e-116 422.9 458 49.1
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 9.1e-116 421.4 428 50.5
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 9.1e-116 421.4 460 50.0
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 4.5e-115 419.1 462 49.8
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 1.1e-113 414.5 457 49.7
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 2.7e-112 409.8 464 47.0
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 1.4e-111 407.5 467 48.6
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 3.0e-111 406.4 470 46.8
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 3.9e-111 406.0 475 46.7
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 8.8e-111 404.8 459 50.1
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 1.5e-110 404.1 436 48.9
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 2.0e-110 403.7 473 45.7
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 2.0e-110 403.7 464 47.2
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 1.3e-109 401.0 462 48.7
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 1.2e-107 394.4 444 48.9
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 2.2e-106 390.2 456 46.1
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 2.9e-106 389.8 444 49.1
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 3.2e-105 386.3 449 47.0
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 2.1e-104 383.6 462 45.0
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 2.1e-104 383.6 448 44.9
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 6.1e-104 382.1 435 48.7
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 8.0e-104 381.7 442 49.1
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 5.2e-103 379.0 457 46.8
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.6e-102 376.7 376 51.6
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 5.7e-102 375.6 442 46.4
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 1.3e-101 374.4 459 46.6
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 2.8e-101 373.2 439 45.1
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 1.8e-100 370.5 425 46.8
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.2e-99 367.9 420 47.6
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 5.9e-99 365.5 450 45.1
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.7e-98 364.0 448 44.4
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 1.7e-98 364.0 432 45.8
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 2.2e-98 363.6 463 46.4
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 3.8e-98 362.8 434 45.4
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 8.5e-98 361.7 445 43.1
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.5e-97 360.9 447 44.5
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 1.9e-97 360.5 446 46.2
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 9.4e-97 358.2 415 45.5
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 8.0e-96 355.1 417 47.0
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 1.0e-95 354.8 446 46.2
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 2.3e-95 353.6 444 46.4
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 5.2e-95 352.4 434 43.1
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 7.5e-94 348.6 459 43.6
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 2.8e-93 346.7 434 43.3
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 2.8e-93 346.7 425 44.5
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 3.7e-93 346.3 439 44.2
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 8.3e-93 345.1 449 43.9
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.4e-92 344.4 446 44.4
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 4.1e-92 342.8 445 44.3
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 9.1e-92 341.7 446 41.3
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 3.5e-91 339.7 455 43.5
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 3.5e-91 339.7 446 41.7
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 5.9e-91 339.0 455 42.0
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 5.9e-91 339.0 447 41.2
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 1.7e-90 337.4 446 41.3
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.2e-90 337.0 462 42.9
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 2.2e-90 337.0 447 41.4
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 2.9e-90 336.7 446 44.6
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 1.9e-89 334.0 431 43.2
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 9.4e-89 331.6 431 44.8
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 9.4e-89 331.6 430 43.5
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 9.4e-89 331.6 473 41.9
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 1.4e-87 327.8 464 41.8
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 1.5e-86 324.3 457 40.3
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 7.5e-86 322.0 329 50.8
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 5.4e-84 315.8 420 41.4
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.2e-83 314.7 490 40.6
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 2.7e-83 313.5 257 58.0
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 2.0e-78 297.4 317 47.0
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 1.2e-75 288.1 559 34.7
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 3.9e-74 283.1 411 39.4
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 1.6e-72 277.7 433 36.3
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 1.4e-68 264.6 415 39.0
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 5.4e-68 262.7 316 45.3
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 5.4e-68 262.7 272 50.4
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.4e-60 238.0 241 51.0
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 2.7e-59 233.8 293 42.0
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 1.9e-57 227.6 242 47.5
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 4.3e-57 226.5 294 42.2
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.9e-53 213.8 376 38.0
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.9e-52 211.1 158 63.9
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 2.5e-49 200.7 433 30.3
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 2.8e-48 197.2 254 43.3
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 1.1e-47 195.3 437 32.0
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.1e-47 193.7 279 41.6
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 8.9e-47 192.2 336 36.6
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 1.6e-40 171.4 227 42.3
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 1.4e-36 158.3 252 36.1
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 4.2e-36 156.8 126 55.6
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.5e-33 148.3 207 44.0
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 1.9e-33 147.9 134 61.2
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.5e-30 136.7 246 35.4
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 4.2e-28 130.2 189 40.2
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 5.5e-28 129.8 198 36.4
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 1.8e-23 114.8 276 30.4
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 5.8e-22 109.8 86 53.5
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 1.3e-18 98.6 99 49.5
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 6.7e-18 96.3 92 47.8
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.8e-16 90.9 76 50.0
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 6.3e-16 89.7 71 52.1
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.9e-09 68.2 90 47.8
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 4.3e-09 67.0 90 46.7
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 5.7e-09 66.6 90 46.7
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 7.4e-09 66.2 90 46.7
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 1.2e-06 58.9 115 34.8
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 1.5e-06 58.5 43 55.8


User provided reference genes

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